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Oryza sativa
cluster # 8007 cluster # 8007       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8007#0 length = 987 sequences # 5  

consensusID : consensus_8007#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 987
fasta sequence
                              [AAGCAGCGTAACACCCAAGTTACCTCCGCTCTCCTCCCCACCGAATCCCCCCGATTGGTCGGCGATGTCGGCGGCGCCCCCGCCTCCCCCCCCGGAGTCCCCGGTCGCCGCCGCCGCCGGCGGAGGCGACAAGGTGCTCGCCGCGGCGCAGCACATCGTCAAGTCGCTGGCGACATCCAAGAACGCCGCCGACGACATGATCCGCATCCTCTCGGGCTTCGACAACCGCCTCTCCCAGATCACCTCCGACCTCTTCCCCTCCCCCGACCTCGCCGCTGACTCCGACGAACGGGGGAACCCCCTGTGGGGGCAGATCTCGGCCGCGGCCTTCGACGCCGCCGAGCAGCTCATCCAGGTCTGGGACGGCACCCCGGAGGCGCTCGTCTTCGAGGCCACCGAGGACGAGGTCGCCGAGTACCTCTCCGCGGTCGACGTGGCCATCGAGCACCTCGCGCGCGGCAGCGGCGGCGGCGCCGGCGGCGCGGGGTCCTCCTCCTCCTCCACCGCGGGCCGCGCCGGGGTCGCCGTGCAGCTCGCCATGGCGCGCCTCGAGGAGGAGCTGCGCCACCTCATGGTCCGCCACGCCGTGCCGCTCGACCCCACGGGCCTCTTCTTCTCCCTGCGCCGCCTCTCGCTCGGCTCCATGGACGACCTCGACACCTCCTCCGAATTCGACGCCGCCACGCCGCACAGCATCGACGTCGCGCCGGAGACCGCGCGCGGCGGGCCCCTGGTCAACCCCTTCGAGGACCAGGTGTTCGACCCCGTGCGCCCTGAGGCCGTCGACGACCTCCGCGCCATCGCCGACCGGATGGCGCGCGCCGGGTACTCGCGCGAGCTCGCCGACGCGTACTGCGGCATCCGCCGTGACCTGCTCGACGAGTACCTCTCCGCGCTCGGCGTCGAGCGCCTCAGCATTGACGAGGTGCAGCGCATCGAGTGGAAGCACCTGAATGACAAGATGAAGAAGTGGGTGCAGGCGGGTCA]

[+] EMBL CB617743             [AAGCAGCGTAACACCCAAGTTACCTCCGCTCTCCTCCCCACCGAATCCCCCCGATTGGTCGGCGATGTCGGCGGCGCCCCCGCCTCCCCCCCCGGAGTCCCCGGTCGCCGCCGCCGCCGGCGGAGGCGACAAGGTGCTCGCCGCGGCGCAGCACATCGTCAAGTCGCTGGCGACATCCAAGAACGCCGCCGACGACATGATCCGCATCCTCTCGGGCTTCGACAACCGCCTCTCCCAGATCACCTCCGACCTCTTCCCCTCCCCCGACCTCGCCGCTGACTCCGACGAACGGGGGAACCCCCTGTGGGGGCAGATCTCGGCCGCGGCCTTCGACGCCGCCGAGCAGCTCATCCAGGTCTGGGACGGCACCCCGGAGGCGCTCGTCTTCGAGGCCACCGAGGACGAGGTCGCCGAGTACCTCTCCGCGGTCGACGTGGCCATCGAGCACCTCGCGCGCGGCAGCGGCGGCGGCGCCGGCGGCGCGGGGTCCTCCTCCTCCTCCACCGCGGGCCGCGCCGGGGTCGCCGTGCAGCTCGCCATGGCGCGCCTCGAGGAGGAGCTGCGCCACCTCATGGTCCGCCACGCCGTGCCGCTCGACCCCACGGGCCTCTTCTTCTCCCTGCGCCGCCTCTCGCTCGGCTCCATGGACGACCTCGACACCTCCTCCGAATTCGACGCCGCCACGCCGCACAGCATCGACGTCGCGCCGGAGACCGCGCGCGGCGGGCCCCTGGTCAACCCCTTCTAGGACCA                                                                                                                                                                                                                                          ]
[+] EMBL CB617720             [AAGCAGCGTAACACCCAAGTTACCTCCGCTCTCCTCCCCACCGAATCCCCCCGATTGGTCGGCGATGTCGGCGGCGCCCCCGCCTCCCCCCCCGGAGTCCCCGGTCGCCGCCGCCGCCGGCGGAGGCGACAAGGTGCTCGCCGCGGCGCAGCACATCGTCAAGTCGCTGGCGACATCCAAGAACGCCGCCGACGACATGATCCGCATCCTCTCGGGCTTCGACAACCGCCTCTCCCAGATCACCTCCGACCTCTTCCCCTCCCCCGACCTCGCCGCTGACTCCGACGAACGGGGGAACCCCCTGTGGGGGCAGATCTCGGCCGCGGCCTTCGACGCCGCCGAGCAGCTCATCCAGGTCTGGGACGGCACCCCGGAGGCGCTCGTCTTCGAGGCCACCGAGGACGAGGTCGCCGAGTACCTCTCCGCGGTCGACGTGGCCATCGAGCACCTCGCGCGCGGCAGCGGCGGCGGCGCCGGCGGCGCGGGGTCCTCCTCCTCCTCCACCGCGGGCCGCGCCGGGGTCGCCGTGCAGCTCGCCATGGCGCGCCTCGAGGAGGAGCTGCGCCACCTCATGGTCCGCCACGCCGTGCCGCTCGACCCCACGGGCCTCTTCTTCTCCCTGCGCCGCCTCTCGCTCGGCTCCATGGACGACCTCG                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB671663             [                                                          TCGGCCATGTCGGCGGCGCCCCCGCCTCCCCCCCCGGAGTCCCCGGTCGCCGCCGCCGCCGGCGGAGGCGACAAGGTGCTCGCCGCGGCGCAGCACATCGTCAAGTCGCTGGCGACATCCAAGAACGCCGCCGACGACATGATCCGCATCCTCTCGGGCTTCGACAACCGCCTCTCCCAGATCACCTCCGACCTCTTCCCCTCCCCCGACCTCGCCGCTGACTCCGACGAACGGGGGAACCCCCTGTGGGGGCAGATCTCGGCCGCGGCCTTCGACGCCGCCGAGCAGCTCATCCAGGTCTGGGACGGCACCCCGGAGGCGCTCGTCTTCGAGGCCACCGAGGACGAGGTCGCCGAGTACCTCTCCGCGGTCGACGTGGCCATCGAGCACCTCGCGCGCGGCAGCGGCGGCGGCGCCGGCGGCGCGGGGTCCTCCTCCTCCTCCACCGCGGGCCGCGCCGGGGTCGCCGTGCAGCTCGCCATGGCGCGCCTCGAGGAGGAGCTGCGCCACCTCATGGTCCGCCACGCCGTGCCGCTCGACCCCACGGGCCTCTTCTTCTCCCTGCGCCGCCTCTCGCTCGGCTCCATGGACGACCTCGACACCTCCTCCGAGTTCGACGCCGCCACGCCGCACAGCATCGACGTCGCGCCGGAGACCGCGCGCGGCGGGCCCCTGGTCAACCCCTTCGAGGACCAGGTGTTCGACCCCGTGCGCCCTGATGCCGTCGACGACCTCCGCGCCATCGCCGACCGGATGGCGCGC                                                                                                                                                                       ]
[+] EMBL CB673695             [                                                                                                                                                                                                    ATGATCCGCATCCTCTCGGGCTTCGACAACCGCCTCTCCCAGATCACCTCCGACCTCTTCCCCTCCCCCGACCTCGCCGCTGACTCCGACGAACGGGGGAACCCCCTGTGGGGGCAGATCTCGGCCGCGGCCTTCGACGCCGCCGAGCAGCTCATCCAGGTCTGGGACGGCACCCCGGAGGCGCTCGTCTTCGAGGCCACCGAGGACGAGGTCGCCGAGTACCTCTCCGCGGTCGACGTGGCCATCGAGCACCTCGCGCGCGGCAGCGGCGGCGGCGCCGGCGGCGCGGGGTCCTCCTCCTCCTCCACCGCGGGCCGCGCCGGGGTCGCCGTGCAGCTCGCCATGGCGCGCCTCGAGGAGGAGCTGCGCCACCTCATGGTCCGCCACGCCGTGCCGCTCGACCCCACGGGCCTCTTCTTCTCCCTGCGCCGCCTCTCGCTCGGCTCCATGGACGACCTCGACACCTCCTCCGAGTTCGACGCCGCCACGCCGCACAGCATCGACGTCGCGCCGGAGACCGCGCGCGGCGGGCCCCTGGTCAACCCCTTCGAGGACCAGGTGTTCGACCCCGTGCGCCCTGAGGCCGTCGACGACCTCCGCGCCATCGCCGACCGGATGGCGCGCGCCGGGTACTCGCGCGAGCTCGCCGACGCGTACTGCGGCATCCGCCGTGACCTGCTCGACGAGTACCTCTCCGCGCTCGGCGTCGAGCGCCTCAGCATTGACGAGGTGCAGCGCATCGAGTGGAAGCACCTGAATGACAAGATGAAGAAGTGGGTGCAGGCGGGTCA]
[+] EMBL CB626989             [                                                                                                                                                                                                                                                                                                                                                                                                                 ACGAGGTCCCCGAGTACCTCTCCGCGGTCGACGTGGCCATCGAGCACCTCGCGCGCGGCAGCGGCGGCGGCGCCGGCGGCGCGGGGTCCTCCTCCTCCTCCACCGCGGGCCGCGCCGGGGTCGCCGTGCAGCTCGCCATGGCGCGCCTCGAGGAGGAGCTGCGCCACCTCATGGTCCGCCACGCCGTGCCGCTCGACCCCACGGGCCTCTTCTTCTCCCTGCGCCGCCTCTCGCTCGGCTCCATGGACGACCTCGACACCTCCTCCGAATTCTACGCCGCCACGCCGCACAGCATCGACGTCTCGCCGGAGACCGCGCGCGGCGGGCCCCTGGTCAACCCCTTCGAGGACCAGGTGTTCGACCCCGTGCGCCCTGAGGCCGTCCACAACCTCCGCGCCCTCACCGACCGGATGGCGCGCGCCGGGTACTCTCGCGAGCTCGCCGACGCGTACTGCGGCATCTTCCGTGACCTGCTCGACGAGTACCTCTCCGCGCTCGGGGTCGAGCGCCTCga                                                                        ]


>consensus_8007#0 AAGCAGCGTAACACCCAAGTTACCTCCGCTCTCCTCCCCACCGAATCCCCCCGATTGGTC GGCGATGTCGGCGGCGCCCCCGCCTCCCCCCCCGGAGTCCCCGGTCGCCGCCGCCGCCGG CGGAGGCGACAAGGTGCTCGCCGCGGCGCAGCACATCGTCAAGTCGCTGGCGACATCCAA GAACGCCGCCGACGACATGATCCGCATCCTCTCGGGCTTCGACAACCGCCTCTCCCAGAT CACCTCCGACCTCTTCCCCTCCCCCGACCTCGCCGCTGACTCCGACGAACGGGGGAACCC CCTGTGGGGGCAGATCTCGGCCGCGGCCTTCGACGCCGCCGAGCAGCTCATCCAGGTCTG GGACGGCACCCCGGAGGCGCTCGTCTTCGAGGCCACCGAGGACGAGGTCGCCGAGTACCT CTCCGCGGTCGACGTGGCCATCGAGCACCTCGCGCGCGGCAGCGGCGGCGGCGCCGGCGG CGCGGGGTCCTCCTCCTCCTCCACCGCGGGCCGCGCCGGGGTCGCCGTGCAGCTCGCCAT GGCGCGCCTCGAGGAGGAGCTGCGCCACCTCATGGTCCGCCACGCCGTGCCGCTCGACCC CACGGGCCTCTTCTTCTCCCTGCGCCGCCTCTCGCTCGGCTCCATGGACGACCTCGACAC CTCCTCCGAATTCGACGCCGCCACGCCGCACAGCATCGACGTCGCGCCGGAGACCGCGCG CGGCGGGCCCCTGGTCAACCCCTTCGAGGACCAGGTGTTCGACCCCGTGCGCCCTGAGGC CGTCGACGACCTCCGCGCCATCGCCGACCGGATGGCGCGCGCCGGGTACTCGCGCGAGCT CGCCGACGCGTACTGCGGCATCCGCCGTGACCTGCTCGACGAGTACCTCTCCGCGCTCGG CGTCGAGCGCCTCAGCATTGACGAGGTGCAGCGCATCGAGTGGAAGCACCTGAATGACAA GATGAAGAAGTGGGTGCAGGCGGGTCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)