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Oryza sativa
cluster # 8013 cluster # 8013       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8013#0 length = 1890 sequences # 2  
consensus_8013#1 length = 1216 sequences # 2  
consensus_8013#2 length = 651 sequences # 1  

consensusID : consensus_8013#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1890
fasta sequence
                              [CTTCCACTGACTCCACTGCTTCTCACCCAACTCGCGCGCGCCATTCCTTGCCTTCTCCGCCCTCTCATCTCATCAAGGAAAGCTCGCGCTCACGCATCGTGTCGCTGGCCATGGCCGTGCAGGCGCAGCGCCTCGCCCAGGCTTTCCCTTACGACCTCCACGCGGCGGCGAGCGGCGGCACGTCCGGGCGCTGGTGGCGGCCGCGGCGCGCGCCACGACGGGGAGGGTGCGTGCGGTGGAGGCCGAGCTGGAGCGCGCGCGCTGCCGCAACGCGGAGCTGGAGGAGAAGCTCCGCCAGGTGAGCGCGGAGGGGCAGGCGTGGATGGGCGTCGCCAAGAGCCACGAGGCCGTCGCCGCCGGCCTCCGCGCCACGCTCGACCAGCTCCTCCTCCAGTCCCCCTGCGCCGCCGCCGCCGCCGCCGCCTCCGCGGGGGAAGGCGACAACGGCGAGTACGGGTTCGTGGAGAGGAAGCGGCCGCGCGTGGCGGCGGGTCTGTTGGAGGACCAGCGCGCGGTCCTGGCGCACGCGATGGCGGCGCCGCTGCAGGGGATCTTGCCCTTCGGGGATGTGGCGGGCAGGGCGGCGTGCGCCGGCGCGGCGTCCACCAGCGGGAGGAGGATGGACGGTGCGGGCGGAATCTCGCAGGGCCTTCTTTCGCAGCTCTACCACCATGGCGTGGAGATCGACGCGCTCGTTCGGCTCGAGGCCGAGCGGATGCGCGCGGGGCTGGAGGAGGCGCAGCGGCGGCACGTCCGGGCGCTGGTGGCGGCGAGTGCGCGCCGCCCATGGCGGCGGTGGAAGGGATCGGGGGCGCGATGTCGCGGTCTCCACGGCGACGTCGTGCAAGGCATGCCGTGTCGCGGAGGGGTCCGTGCTGCTGCTCCCGTGCCGCCACCTGTGCCTGTGCGGCGCCTGCGAGGCCGCCGCCGACGCTTGCCCCGTCTGCGCCGCCACCAAGAACGCCTCCGTCCATGTCCTCCTCTCCTGAAGTCACACGAACCACAGCTATGGCGAGACCGAAACCGACCATCCGGCGTCAAGCAAAGCTAACAACAATCATCCTGTCCCAAGTTACATGGAAAATTCATGCCACGGTTCAGTGCATCGGTGATCTCCGGGCCACGCGAGTTTTTGCCGGTGGAAGCAACAGTGTTCGGTGCGGTGGATTGAATGGTTTGATTGCCGATCGATCTCATCTGCCGCAGGTACCGTTGCTTCAAAAGATTTGGCAGCAAGTGGGGGGCAGTCTAAAATGGACCTACTTCTACGAACACAATCCCTGTCCATAATTGGCAGTTTGGCACCGGCGTATAAATGCACTGGTTCACTTGTCGCCGTTGTCCGGGGTTACACGGTTCAGCTGGCAGATTAATTATCTTCAGAGGTGTGGTGTGAACTGTGAAGTGATGGAGGTGTTGTTCTTGAGATGAACAGAGACAACAAAGGGGGTTACAGTTACAGTTACAGTCAGACGAGATGCTATACAAATGAGAAATGACAGCAGCTGATGATGGCCGCTGCAACCCAAAGCTCCACGCATGATGGTCGAAAGTGCGGCGTTTCAGAAATCTGCTTCGGCTGTGTCGGCCACCATCGAAGTTATTCTGAACATAAATTGGTTTGGGTCAAAACTCTGCTTTGCTTTGGAGTGCAGAAAGGGAGTGTAGAGGCGCACTAACGATTAGGGGTCGAGTTGTGCGAGGATCCTGTACAAGAACAGCAGGAGATTTTTTGCGCATGGAACATCGAAAATGCCTTGATCAAAGGCATAATTAGAAAGATTGTCTTGTAAAATTGGTCAAAGTTTTTGTTCCAATTCATGTAGCGATGTGTGATCCTGCGGTCCTTCAATCAGCAGGAATTGTTTCTTTTTAATTAAAAAGAATGAC]

[+] EMBL AK120583             [CTTCCACTGACTCCACTGCTTCTCACCCAACTCGCGCGCGCCATTCCTTGCCTTCTCCGCCCTCTCATCTCATCAAGGAAAGCTCGCGCTCACGCATCGTGTCGCTGGCCATGGCCGTGCAGGCGCAGCGCCTCGCCCAGGCTTTCCCTTACGACCTCCACGCGGCGGCGAGCGGCGGCACGTCCGGGCGCTGGTGGCGGCCGCGGCGCGCGCCACGACGGGGAGGGTGCGTGCGGTGGAGGCCGAGCTGGAGCGCGCGCGCTGCCGCAACGCGGAGCTGGAGGAGAAGCTCCGCCAGGTGAGCGCGGAGGGGCAGGCGTGGATGGGCGTCGCCAAGAGCCACGAGGCCGTCGCCGCCGGCCTCCGCGCCACGCTCGACCAGCTCCTCCTCCAGTCCCCCTGCGCCGCCGCCGCCGCCGCCGCCTCCGCGGGGGAAGGCGACAACGGCGAGTACGGGTTCGTGGAGAGGAAGCGGCCGCGCGTGGCGGCGGGTCTGTTGGAGGACCAGCGCGCGGTCCTGGCGCACGCGATGGCGGCGCCGCTGCAGGGGATCTTGCCCTTCGGGGATGTGGCGGGCAGGGCGGCGTGCGCCGGCGCGGCGTCCACCAGCGGGAGGAGGATGGACGGTGCGGGCGGAATCTCGCAGGGCCTTCTTTCGCAGCTCTACCACCATGGCGTGGAGATCGACGCGCTCGTTCGGCTCGAGGCCGAGCGGATGCGCGCGGGGCTGGAGGAGGCGCAGCGGCGGCACGTCCGGGCGCTGGTGGCGGCGAGTGCGCGCCGCCCATGGCGGCGGTGGAAGGGATCGGGGGCGCGATGTCGCGGTCTCCACGGCGACGTCGTGCAAGGCATGCCGTGTCGCGGAGGGGTCCGTGCTGCTGCTCCCGTGCCGCCACCTGTGCCTGTGCGGCGCCTGCGAGGCCGCCGCCGACGCTTGCCCCGTCTGCGCCGCCACCAAGAACGCCTCCGTCCATGTCCTCCTCTCCTGAAGTCACACGAACCACAGCTATGGCGAGACCGAAACCGACCATCCGGCGTCAAGCAAAGCTAACAACAATCATCCTGTCCCAAGTTACATGGAAAATTCATGCCACGGTTCAGTGCATCGGTGATCTCCGGGCCACGCGAGTTTTTGCCGGTGGAAGCAACAGTGTTCGGTGCGGTGGATTGAATGGTTTGATTGCCGATCGATCTCATCTGCCGCAGGTACCGTTGCTTCAAAAGATTTGGCAGCAAGTGGGGGGCAGTCTAAAATGGACCTACTTCTACGAACACAATCCCTGTCCATAATTGGCAGTTTGGCACCGGCGTATAAATGCACTGGTTCACTTGTCGCCGTTGTCCGGGGTTACACGGTTCAGCTGGCAGATTAATTATCTTCAGAGGTGTGGTGTGAACTGTGAAGTGATGGAGGTGTTGTTCTTGAGATGAACAGAGACAACAAAGGGGGTTACAGTTACAGTTACAGTCAGACGAGATGCTATACAAATGAGAAATGACAGCAGCTGATGATGGCCGCTGCAACCCAAAGCTCCACGCATGATGGTCGAAAGTGCGGCGTTTCAGAAATCTGCTTCGGCTGTGTCGGCCACCATCGAAGTTATTCTGAACATAAATTGGTTTGGGTCAAAACTCTGCTTTGCTTTGGAGTGCAGAAAGGGAGTGTAGAGGCGCACTAACGATTAGGGGTCGAGTTGTGCGAGGATCCTGTACAAGAACAGCAGGAGATTTTTTGCGCATGGAACATCGAAAATGCCTTGATCAAAGGCATAATTAGAAAGATTGTCTTGTAAAATTGGTCAAAGTTTTTGTTCCAATTCATGTAGCGATGTGTGATCCTGCGGTCCTTCAATCAGCAGGAATTGTTTCTTTTTAATTAAAAAGAATGAC]
[+] EMBL AU101422             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTCCGTGCTGCTGCTCCCGTGCCGCCACCTGTGCCTGTGCGGCGCCTGCGAGGCCGCCGCCGACGCTTGCCCCGTCTGCGCCGCCACCAAGAACGCCTCCGTCCATGTCCTCCTCTCCTGAAGTCACACGAACCACAGCTATGGCGAGACCGAAACCGACCATCCGGCGTCAAGCAAAGCTAACAACAATCATCCTGTCCCAAGTTACATGGAAAATTCATGCCACGGTTCAGTGCATCGGTGATCTCCGGGCCACGCGAGTTTTTGTCGGTGGAAGCAACAGTGTTCGGTGCGGTGGATTGAATGGTTTGATTGCCGATCGATCTCATCTGCCGCAGGTACCGTTGCTTCAAAAGATTTGGCAGCAAGTGGGGGGCAGTCTAAAATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]


>consensus_8013#0 CTTCCACTGACTCCACTGCTTCTCACCCAACTCGCGCGCGCCATTCCTTGCCTTCTCCGC CCTCTCATCTCATCAAGGAAAGCTCGCGCTCACGCATCGTGTCGCTGGCCATGGCCGTGC AGGCGCAGCGCCTCGCCCAGGCTTTCCCTTACGACCTCCACGCGGCGGCGAGCGGCGGCA CGTCCGGGCGCTGGTGGCGGCCGCGGCGCGCGCCACGACGGGGAGGGTGCGTGCGGTGGA GGCCGAGCTGGAGCGCGCGCGCTGCCGCAACGCGGAGCTGGAGGAGAAGCTCCGCCAGGT GAGCGCGGAGGGGCAGGCGTGGATGGGCGTCGCCAAGAGCCACGAGGCCGTCGCCGCCGG CCTCCGCGCCACGCTCGACCAGCTCCTCCTCCAGTCCCCCTGCGCCGCCGCCGCCGCCGC CGCCTCCGCGGGGGAAGGCGACAACGGCGAGTACGGGTTCGTGGAGAGGAAGCGGCCGCG CGTGGCGGCGGGTCTGTTGGAGGACCAGCGCGCGGTCCTGGCGCACGCGATGGCGGCGCC GCTGCAGGGGATCTTGCCCTTCGGGGATGTGGCGGGCAGGGCGGCGTGCGCCGGCGCGGC GTCCACCAGCGGGAGGAGGATGGACGGTGCGGGCGGAATCTCGCAGGGCCTTCTTTCGCA GCTCTACCACCATGGCGTGGAGATCGACGCGCTCGTTCGGCTCGAGGCCGAGCGGATGCG CGCGGGGCTGGAGGAGGCGCAGCGGCGGCACGTCCGGGCGCTGGTGGCGGCGAGTGCGCG CCGCCCATGGCGGCGGTGGAAGGGATCGGGGGCGCGATGTCGCGGTCTCCACGGCGACGT CGTGCAAGGCATGCCGTGTCGCGGAGGGGTCCGTGCTGCTGCTCCCGTGCCGCCACCTGT GCCTGTGCGGCGCCTGCGAGGCCGCCGCCGACGCTTGCCCCGTCTGCGCCGCCACCAAGA ACGCCTCCGTCCATGTCCTCCTCTCCTGAAGTCACACGAACCACAGCTATGGCGAGACCG AAACCGACCATCCGGCGTCAAGCAAAGCTAACAACAATCATCCTGTCCCAAGTTACATGG AAAATTCATGCCACGGTTCAGTGCATCGGTGATCTCCGGGCCACGCGAGTTTTTGCCGGT GGAAGCAACAGTGTTCGGTGCGGTGGATTGAATGGTTTGATTGCCGATCGATCTCATCTG CCGCAGGTACCGTTGCTTCAAAAGATTTGGCAGCAAGTGGGGGGCAGTCTAAAATGGACC TACTTCTACGAACACAATCCCTGTCCATAATTGGCAGTTTGGCACCGGCGTATAAATGCA CTGGTTCACTTGTCGCCGTTGTCCGGGGTTACACGGTTCAGCTGGCAGATTAATTATCTT CAGAGGTGTGGTGTGAACTGTGAAGTGATGGAGGTGTTGTTCTTGAGATGAACAGAGACA ACAAAGGGGGTTACAGTTACAGTTACAGTCAGACGAGATGCTATACAAATGAGAAATGAC AGCAGCTGATGATGGCCGCTGCAACCCAAAGCTCCACGCATGATGGTCGAAAGTGCGGCG TTTCAGAAATCTGCTTCGGCTGTGTCGGCCACCATCGAAGTTATTCTGAACATAAATTGG TTTGGGTCAAAACTCTGCTTTGCTTTGGAGTGCAGAAAGGGAGTGTAGAGGCGCACTAAC GATTAGGGGTCGAGTTGTGCGAGGATCCTGTACAAGAACAGCAGGAGATTTTTTGCGCAT GGAACATCGAAAATGCCTTGATCAAAGGCATAATTAGAAAGATTGTCTTGTAAAATTGGT CAAAGTTTTTGTTCCAATTCATGTAGCGATGTGTGATCCTGCGGTCCTTCAATCAGCAGG AATTGTTTCTTTTTAATTAAAAAGAATGAC



consensusID : consensus_8013#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1216
fasta sequence
                              [CAACAGGGAGGACGCGTGCGGCGGAGGCCAAGCTGGATCGCGCACGCTGCCGCAACGCGGAGCTGGAGGAGAAGCTCCGCCAGATGAGCGCGGAAGGGCAGGCGTGGATGGGCGTTGCCAAGAGCCACGAGGCTGTCGCCGCCGGCCTCCGCGCGATGCTCGACTAGCTCCTCCAGTCCCCCTATGCCGTCGCCGCCACCGCGGGGGAGGGCGACGCCGAGGATGCGCAGTCGTGCTGCTTCGAGACCCCAGGCGGCGGCGCCGCCGCCACTGCCACCGACGCGGTGTCCGGGGCGACGTCGTGCAAGGCCTGCCGTGTCACGGAGGCGTCCGTGCTGCCGCCTGTGCCTGTGCGGCGCCTGCGAGGCCGCCGTTGACGCTTGCCCCGTTTGCGCCGCCACCAAGATCGCCTCCGTCCATGTCCTCCTTTCCTGAAGTCACTCACATGTGCCACACCAGCTACTGCATGGAGTAGGAGATTTCGATAGCGCAACAGCTGTGGCCAGACCGAAACCAGGCATCCGTCAGCCAACTCCGGTGTCAAGCAAGCTAACAACAATCATCCTGTCCCAAGTTACATGGAAATTCATGCTAGGGAAGCCACAGTTCTGTGCATCAGCGATCTCCGGGCCATGCGAGTTTTGTCGGTGGAAACAACAGTGTTCGGTGCGGTGAATTGAATGGTTGATTGCCTATCTCATCTTCCGCAGGTACCATTGCTTCGAATATTTGGCAGCCCGGATAGGCATGCACGCCGTCCCGTCTCCCCGTCGGCCGCTGCTCGTCGGTTGTCCTCCCCATCAGCTGCCTCCCGTCCTGGCACCCCTTCTCCCCGCCGATCCTCGCCTGTCGACGACGTCCCGGCGCCGCTCCCCATCCGCCGGCCACCGCAGCTCCGCGCCTCCGCTTCGCCGGCCGCCGCGCGCTCACACGCTGCCTCCGCCGTCCGCCGCTCAACCCCCCTCGCCGTCCGGTCGTCTGCTCCCTACCCGTCGGCCAGCCTGCAAGAGAAGAGTGCGAGAGAGAGGGGGGAGGAAGGGAGAGAAGAAGAGGGGAAAGGGGAATTGACGTGGCAAGCCCACATGTGGGTCCCACGCGCCACGTAGGCTAAAACAGGGTCAAAACCACTAAAGGATCTCGGGTGACTGGTTTTGTATAGTTAAGGGACACCTCATATCTGGTTTTGCGGTTTGAGGATGTTTTTGTATCCGATGAC]

[+] EMBL AK106657             [CAACAGGGAGGACGCGTGCGGCGGAGGCCAAGCTGGATCGCGCACGCTGCCGCAACGCGGAGCTGGAGGAGAAGCTCCGCCAGATGAGCGCGGAAGGGCAGGCGTGGATGGGCGTTGCCAAGAGCCACGAGGCTGTCGCCGCCGGCCTCCGCGCGATGCTCGACTAGCTCCTCCAGTCCCCCTATGCCGTCGCCGCCACCGCGGGGGAGGGCGACGCCGAGGATGCGCAGTCGTGCTGCTTCGAGACCCCAGGCGGCGGCGCCGCCGCCACTGCCACCGACGCGGTGTCCGGGGCGACGTCGTGCAAGGCCTGCCGTGTCACGGAGGCGTCCGTGCTGCCGCCTGTGCCTGTGCGGCGCCTGCGAGGCCGCCGTTGACGCTTGCCCCGTTTGCGCCGCCACCAAGATCGCCTCCGTCCATGTCCTCCTTTCCTGAAGTCACTCACATGTGCCACACCAGCTACTGCATGGAGTAGGAGATTTCGATAGCGCAACAGCTGTGGCCAGACCGAAACCAGGCATCCGTCAGCCAACTCCGGTGTCAAGCAAGCTAACAACAATCATCCTGTCCCAAGTTACATGGAAATTCATGCTAGGGAAGCCACAGTTCTGTGCATCAGCGATCTCCGGGCCATGCGAGTTTTGTCGGTGGAAACAACAGTGTTCGGTGCGGTGAATTGAATGGTTGATTGCCTATCTCATCTTCCGCAGGTACCATTGCTTCGAATATTTGGCAGCCCGGATAGGCATGCACGCCGTCCCGTCTCCCCGTCGGCCGCTGCTCGTCGGTTGTCCTCCCCATCAGCTGCCTCCCGTCCTGGCACCCCTTCTCCCCGCCGATCCTCGCCTGTCGACGACGTCCCGGCGCCGCTCCCCATCCGCCGGCCACCGCAGCTCCGCGCCTCCGCTTCGCCGGCCGCCGCGCGCTCACACGCTGCCTCCGCCGTCCGCCGCTCAACCCCCCTCGCCGTCCGGTCGTCTGCTCCCTACCCGTCGGCCAGCCTGCAAGAGAAGAGTGCGAGAGAGAGGGGGGAGGAAGGGAGAGAAGAAGAGGGGAAAGGGGAATTGACGTGGCAAGCCCACATGTGGGTCCCACGCGCCACGTAGGCTAAAACAGGGTCAAAACCACTAAAGGATCTCGGGTGACTGGTTTTGTATAGTTAAGGGACACCTCATATCTGGTTTTGCGGTTTGAGGATGTTTTTGTATCCGATGAC]
[+] EMBL AK109328             [CAACAGGGAGGACGCGTGCGGCGGAGGCCAAGCTGGATCGCGCACGCTGCCGCAACGCGGAGCTGGAGGAGAAGCTCCGCCAGATGAGCGCGGAAGGGCAGGCGTGGATGGGCGTTGCCAAGAGCCACGAGGCTGTCGCCGCCGGCCTCCGCGCGATGCTCGACTAGCTCCTCCAGTCCCCCTATGCCGTCGCCGCCACCGCGGGGGAGGGCGACGCCGAGGATGCGCAGTCGTGCTGCTTCGAGACCCCAGGCGGCGGCGCCGCCGCCACTGCCACCGACGCGGTGTCCGGGGCGACGTCGTGCAAGGCCTGCCGTGTCACGGAGGCGTCCGTGCTGCCGCCTGTGCCTGTGCGGCGCCTGCGAGGCCGCCGTTGACGCTTGCCCCGTTTGCGCCGCCACCAAGATCGCCTCCGTCCATGTCCTCCTTTCCTGAAGTCACTCACATGTGCCACACCAGCTACTGCATGGAGTAGGAGATTTCGATAGCGCAACAGCTGTGGCCAGACCGAAACCAGGCATCCGTCAGCCAACTCCGGTGTCAAGCAAGCTAACAACAATCATCCTGTCCCAAGTTACATGGAAATTCATGCTAGGGAAGCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]


>consensus_8013#1 CAACAGGGAGGACGCGTGCGGCGGAGGCCAAGCTGGATCGCGCACGCTGCCGCAACGCGG AGCTGGAGGAGAAGCTCCGCCAGATGAGCGCGGAAGGGCAGGCGTGGATGGGCGTTGCCA AGAGCCACGAGGCTGTCGCCGCCGGCCTCCGCGCGATGCTCGACTAGCTCCTCCAGTCCC CCTATGCCGTCGCCGCCACCGCGGGGGAGGGCGACGCCGAGGATGCGCAGTCGTGCTGCT TCGAGACCCCAGGCGGCGGCGCCGCCGCCACTGCCACCGACGCGGTGTCCGGGGCGACGT CGTGCAAGGCCTGCCGTGTCACGGAGGCGTCCGTGCTGCCGCCTGTGCCTGTGCGGCGCC TGCGAGGCCGCCGTTGACGCTTGCCCCGTTTGCGCCGCCACCAAGATCGCCTCCGTCCAT GTCCTCCTTTCCTGAAGTCACTCACATGTGCCACACCAGCTACTGCATGGAGTAGGAGAT TTCGATAGCGCAACAGCTGTGGCCAGACCGAAACCAGGCATCCGTCAGCCAACTCCGGTG TCAAGCAAGCTAACAACAATCATCCTGTCCCAAGTTACATGGAAATTCATGCTAGGGAAG CCACAGTTCTGTGCATCAGCGATCTCCGGGCCATGCGAGTTTTGTCGGTGGAAACAACAG TGTTCGGTGCGGTGAATTGAATGGTTGATTGCCTATCTCATCTTCCGCAGGTACCATTGC TTCGAATATTTGGCAGCCCGGATAGGCATGCACGCCGTCCCGTCTCCCCGTCGGCCGCTG CTCGTCGGTTGTCCTCCCCATCAGCTGCCTCCCGTCCTGGCACCCCTTCTCCCCGCCGAT CCTCGCCTGTCGACGACGTCCCGGCGCCGCTCCCCATCCGCCGGCCACCGCAGCTCCGCG CCTCCGCTTCGCCGGCCGCCGCGCGCTCACACGCTGCCTCCGCCGTCCGCCGCTCAACCC CCCTCGCCGTCCGGTCGTCTGCTCCCTACCCGTCGGCCAGCCTGCAAGAGAAGAGTGCGA GAGAGAGGGGGGAGGAAGGGAGAGAAGAAGAGGGGAAAGGGGAATTGACGTGGCAAGCCC ACATGTGGGTCCCACGCGCCACGTAGGCTAAAACAGGGTCAAAACCACTAAAGGATCTCG GGTGACTGGTTTTGTATAGTTAAGGGACACCTCATATCTGGTTTTGCGGTTTGAGGATGT TTTTGTATCCGATGAC



consensusID : consensus_8013#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 651
fasta sequence
                              [ANCACCAGTGTTCGGTCCGGTGGATTGAATGGTTTGATTNCCGATCGATCTCATCTGCCGCAGGTACCGTTGCTTCAAAAGATTTGGCAGCAAGTGGGGGNCAGTTTAAAATGGACCTACTTCTACGAACNCAATCCCTGTCCATAATTGGCAGTTTGGCACCGGCGTATAAATGCACTGGTTCACTTGTCGCCGTTGTCCGGGGTTACACGGTTCAGCTGGCAGATTAATTATCTTCAGAGGTGTGGTGTGAACTGTGAAGTGATGGAGGTGTTGTTCTTGAGATGAACAGAGACAACAAAGGGGGTTACAGTTACAGTTACAGTCAGACGAGATGCTATACAAATGAGAAATGACAGCAGCTGATGATGGCCGCTGCAACCCAAAGCTCCACGCATGATGGTCGAAAGTGCGGCGTTTCAGAAATCTGCTTCGGCTGTGTCGGCCACCATCGAAGTTATTCTGAACATAAATTGGTTTGGGTCAAAACTCTGCTTTGCTTTGGAGTGCAGAAAGGGAGTGTANAGGCGCACTAACGATTAGGGGTCGAGTTGTGCGAGGATCCTGTACAAGAACAGCAGGAGATTTTTTGCGCATGGAACATCGAAAATGCCTTGATCAAAGGCATAATTAGAAAAAAAAAAAAAAAAA]

[+] EMBL AU101423             [ANCACCAGTGTTCGGTCCGGTGGATTGAATGGTTTGATTNCCGATCGATCTCATCTGCCGCAGGTACCGTTGCTTCAAAAGATTTGGCAGCAAGTGGGGGNCAGTTTAAAATGGACCTACTTCTACGAACNCAATCCCTGTCCATAATTGGCAGTTTGGCACCGGCGTATAAATGCACTGGTTCACTTGTCGCCGTTGTCCGGGGTTACACGGTTCAGCTGGCAGATTAATTATCTTCAGAGGTGTGGTGTGAACTGTGAAGTGATGGAGGTGTTGTTCTTGAGATGAACAGAGACAACAAAGGGGGTTACAGTTACAGTTACAGTCAGACGAGATGCTATACAAATGAGAAATGACAGCAGCTGATGATGGCCGCTGCAACCCAAAGCTCCACGCATGATGGTCGAAAGTGCGGCGTTTCAGAAATCTGCTTCGGCTGTGTCGGCCACCATCGAAGTTATTCTGAACATAAATTGGTTTGGGTCAAAACTCTGCTTTGCTTTGGAGTGCAGAAAGGGAGTGTANAGGCGCACTAACGATTAGGGGTCGAGTTGTGCGAGGATCCTGTACAAGAACAGCAGGAGATTTTTTGCGCATGGAACATCGAAAATGCCTTGATCAAAGGCATAATTAGAAAAAAAAAAAAAAAAA]


>consensus_8013#2 ANCACCAGTGTTCGGTCCGGTGGATTGAATGGTTTGATTNCCGATCGATCTCATCTGCCG CAGGTACCGTTGCTTCAAAAGATTTGGCAGCAAGTGGGGGNCAGTTTAAAATGGACCTAC TTCTACGAACNCAATCCCTGTCCATAATTGGCAGTTTGGCACCGGCGTATAAATGCACTG GTTCACTTGTCGCCGTTGTCCGGGGTTACACGGTTCAGCTGGCAGATTAATTATCTTCAG AGGTGTGGTGTGAACTGTGAAGTGATGGAGGTGTTGTTCTTGAGATGAACAGAGACAACA AAGGGGGTTACAGTTACAGTTACAGTCAGACGAGATGCTATACAAATGAGAAATGACAGC AGCTGATGATGGCCGCTGCAACCCAAAGCTCCACGCATGATGGTCGAAAGTGCGGCGTTT CAGAAATCTGCTTCGGCTGTGTCGGCCACCATCGAAGTTATTCTGAACATAAATTGGTTT GGGTCAAAACTCTGCTTTGCTTTGGAGTGCAGAAAGGGAGTGTANAGGCGCACTAACGAT TAGGGGTCGAGTTGTGCGAGGATCCTGTACAAGAACAGCAGGAGATTTTTTGCGCATGGA ACATCGAAAATGCCTTGATCAAAGGCATAATTAGAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8013#0      CTTCCACTGACTCCACTGCTTCTCACCCAACTCGCGCGCGCCATTCCTTGCCTTCTCCGC 60
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      ------------------------------------------------------------
                                                                                  

consensus_8013#0      CCTCTCATCTCATCAAGGAAAGCTCGCGCTCACGCATCGTGTCGCTGGCCATGGCCGTGC 120
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      ------------------------------------------------------------
                                                                                  

consensus_8013#0      AGGCGCAGCGCCTCGCCCAGGCTTTCCCTTACGACCTCCACGCGGCGGCGAGCGGCGGCA 180
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      ------------------------------------------------------------
                                                                                  

consensus_8013#0      CGTCCGGGCGCTGGTGGCGGCCGCGGCGCGCGCCACGACGGGGAGGGTGCGTGCGGTGGA 240
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      ------------------------------------------------------------
                                                                                  

consensus_8013#0      GGCCGAGCTGGAGCGCGCGCGCTGCCGCAACGCGGAGCTGGAGGAGAAGCTCCGCCAGGT 300
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      ------------------------------------------------------------
                                                                                  

consensus_8013#0      GAGCGCGGAGGGGCAGGCGTGGATGGGCGTCGCCAAGAGCCACGAGGCCGTCGCCGCCGG 360
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      ------------------------------------------------------------
                                                                                  

consensus_8013#0      CCTCCGCGCCACGCTCGACCAGCTCCTCCTCCAGTCCCCCTGCGCCGCCGCCGCCGCCGC 420
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      ------------------------------------------------------------
                                                                                  

consensus_8013#0      CGCCTCCGCGGGGGAAGGCGACAACGGCGAGTACGGGTTCGTGGAGAGGAAGCGGCCGCG 480
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      ------------------------------------------------------------
                                                                                  

consensus_8013#0      CGTGGCGGCGGGTCTGTTGGAGGACCAGCGCGCGGTCCTGGCGCACGCGATGGCGGCGCC 540
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      ------------------------------------------------------------
                                                                                  

consensus_8013#0      GCTGCAGGGGATCTTGCCCTTCGGGGATGTGGCGGGCAGGGCGGCGTGCGCCGGCGCGGC 600
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      ----CAACAGGGAGGACGCGTGCGGCGGAGGCCAAGCTGGATCGCGCACGCTGCCGCAAC 56
                                                                                  

consensus_8013#0      GTCCACCAGCGGGAGGAGGATGGACGG-TGCGGGCGGAATCTCGCAGGGCCTTCTTTCGC 659
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      GCGGAGCTGGAGGAGAAGCTCCGCCAGATGAGCGCGGAAGGGCAGGCGTGGATGGGCGTT 116
                                                                                  

consensus_8013#0      AGCTCTA-CCACCATGGCGTGGAGATCGACGCGCTCGTTCGGCTCGAG-GCCGAGCGGAT 717
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      GCCAAGAGCCACGAGGCTGTCGCCGCCGGCCTCCGCGCGATGCTCGACTAGCTCCTCCAG 176
                                                                                  

consensus_8013#0      GCGCGCGGGGCTGGAGGAGGCGCAGCGGCGGCACGTCCGGGCGCTGGTG-GCGGCGAGTG 776
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      TCCCCCTATGCCGTCGCCGCCACCGCGGGGGAGGGCGACGCCGAGGATGCGCAGTCGTGC 236
                                                                                  

consensus_8013#0      CGCGCCGCCCATGGCGGCGGTGGAAGGGATCGGGGGCGCGATGTCGCGGTCTCCACGGCG 836
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      TGCTTCGAGACCCCAGGCGGCGGCGCCGCCGCCACTGCCACCGACGCGGTGTCCGGGGCG 296
                                                                                  

consensus_8013#0      ACGTCGTGCAAGGCATGCCGTGTCGCGGAGGGGTCCGTGCTGCTGCTCCCGTGCCGCCAC 896
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      ACGTCGTGCAAGGCCTGCCGTGTCACGGAGGCGTCCGTGCTGCCGC-------------- 342
                                                                                  

consensus_8013#0      CTGTGCCTGTGCGGCGCCTGCGAGGCCGCCGCCGACGCTTGCCCCGTCTGCGCCGCCACC 956
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      CTGTGCCTGTGCGGCGCCTGCGAGGCCGCCGTTGACGCTTGCCCCGTTTGCGCCGCCACC 402
                                                                                  

consensus_8013#0      AAGAACGCCTCCGTCCATGTCCTCCTCTCCTGAAGTCAC----ACGAACCACAGCTATGG 1012
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      AAGATCGCCTCCGTCCATGTCCTCCTTTCCTGAAGTCACTCACATGTGCCACACCAGCTA 462
                                                                                  

consensus_8013#0      CGAGACCGAAACCGACCATCCGGCGTCAAGCAAAGCTAACAACAATCATCCTGTCCCAAG 1072
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      CTGCATGGAGTAGGAGATTTCGATAGCGCA-ACAGCTGTGGCCAG--ACCGAAACCAGGC 519
                                                                                  

consensus_8013#0      TTACATGGAAAATTCATGCCACGGTTCAGTGCATCGGTGATCTCCGGGCCACGCGAGTTT 1132
consensus_8013#2      ------------------------------------------------------------
consensus_8013#1      ATCCGTCAGCCAACTCCGGTGTCAAGCAAGCTAACAACAATCATCCTGTCCCAAGTTACA 579
                                                                                  

consensus_8013#0      TTGCCGGTGGAAGCAACAGTGTT-CGGTGCGGTGGATTGAATGGTTTGATTGCCGATCGA 1191
consensus_8013#2      -----------ANCACCAGTGTT-CGGTCCGGTGGATTGAATGGTTTGATTNCCGATCGA 48
consensus_8013#1      TGGAAATTCATGCTAGGGAAGCCACAGTTCTGTGCATC-AGCGATCTCCGGGCCATGCGA 638
                                    *     *   * ** * *** **  *  * * *     **   ***

consensus_8013#0      TCTCATCTGCCGCAGGTACCGTTGCTTCAAAAGATTTGGCAGCAAGTGGGGGGCAGTCTA 1251
consensus_8013#2      TCTCATCTGCCGCAGGTACCGTTGCTTCAAAAGATTTGGCAGCAAGTGGGGGNCAGTTTA 108
consensus_8013#1      GTTTTGTCGGTGGAAACAACAGTGTTCGGTGCGGT---GAATTGAATGGTTGATTGCCTA 695
                        *     *  * *   * *  ** *      * *   * *   * ***  *   *  **

consensus_8013#0      AAATGGACCTACTTCTACGAACACAATCCCTGTCCATAATTGGCAGTTTGGCACCGGCGT 1311
consensus_8013#2      AAATGGACCTACTTCTACGAACNCAATCCCTGTCCATAATTGGCAGTTTGGCACCGGCGT 168
consensus_8013#1      TC-----TCATCTTCCGCAGGTACCATTGCTTCGAATATTTGGCAGCCCGG-------AT 743
                              *  ****  *     * **  **    *** *******   **        *

consensus_8013#0      ATAAATGCACTGGTTCACTTGTCGCCGTTGTCCGGGGTTACACGGTTCAGCTGGCAGATT 1371
consensus_8013#2      ATAAATGCACTGGTTCACTTGTCGCCGTTGTCCGGGGTTACACGGTTCAGCTGGCAGATT 228
consensus_8013#1      AGGCATGCACGCCGTCCCGTCTCCCCGTCGGCCGCTGCTCGTCGGTT-GTCCTCCCCATC 802
                      *   ******    ** * * ** **** * ***  * *   *****   *   *  ** 

consensus_8013#0      AATTATCTTCAGAGGTGTGGTGTGAACTGTGAAGTGATGGAGGTGTTGTTCTTGAGATGA 1431
consensus_8013#2      AATTATCTTCAGAGGTGTGGTGTGAACTGTGAAGTGATGGAGGTGTTGTTCTTGAGATGA 288
consensus_8013#1      AGCTGCCTCCCGTCCTGGCACCCCTTCTCCCCGCCGATCCTCGC-CTGTCGACGACGTCC 861
                      *  *  ** * *   **         **       ***    *   ***    **  *  

consensus_8013#0      ACA-GAGACAACAAAGGGGGTTACAGTTACAGTTACAGTCAGACGAGATGCTATACAAAT 1490
consensus_8013#2      ACA-GAGACAACAAAGGGGGTTACAGTTACAGTTACAGTCAGACGAGATGCTATACAAAT 347
consensus_8013#1      CGGCGCCGCTCCCCATCCGCCGGCCACCGCAGCTCCGCGCCTCCGCTTCGCCG-GCCGCC 920
                          *   *  *  *   *    *     *** * *   *   **    **    *    

consensus_8013#0      GAGAAATGACAGCAGCTGATGATGGCCGCTGCAACCCAAAGCTCCACGCATGATGGTCGA 1550
consensus_8013#2      GAGAAATGACAGCAGCTGATGATGGCCGCTGCAACCCAAAGCTCCACGCATGATGGTCGA 407
consensus_8013#1      GCGCGCTCACA--CGCTGCCTCCGCCGTCCGCCGCTCAACCCCCCTCGCCGTCCGGTCGT 978
                      * *   * ***   ****     * *  * **  * ***  * ** ***     ***** 

consensus_8013#0      AAGTGCGGCGTTTCAGAAATCTGCTTCGGCTGTGTCGGCCACCATCGAAGTTATTCTGAA 1610
consensus_8013#2      AAGTGCGGCGTTTCAGAAATCTGCTTCGGCTGTGTCGGCCACCATCGAAGTTATTCTGAA 467
consensus_8013#1      --CTGCTCCCTACCCGTCGGCCAGCCTGCAAGAGAAGAGTGCGAGAGAGAGGGGGGAGGA 1036
                         ***  * *  * *    *      *   * *  *    * *  **         * *

consensus_8013#0      CATAAATTGGTTTGGGTCAAAACTCTGCTTTGCTTTG-GAGTGCAGAAAGGGAGTGTAGA 1669
consensus_8013#2      CATAAATTGGTTTGGGTCAAAACTCTGCTTTGCTTTG-GAGTGCAGAAAGGGAGTGTANA 526
consensus_8013#1      AGGGAGAGAAGAAGAGGGGAAAGGGGAATTGACGTGGCAAGCCCACATGTGGGTCCCACG 1096
                          *        * *   ***      **  * * *  **  ** *   **     *  

consensus_8013#0      GGC-GCACTAAC--GATTAGGGGTCGAGTTGTGCGAGGATCCTGTACAAGAACAGCAGGA 1726
consensus_8013#2      GGC-GCACTAAC--GATTAGGGGTCGAGTTGTGCGAGGATCCTGTACAAGAACAGCAGGA 583
consensus_8013#1      CGCCACGTAGGCTAAAACAGGGTCAAAACCACTAAAGGATCTCGGGTGACTGGTTTTGTA 1156
                       **  *     *   *  ****    *        ******  *    *        * *

consensus_8013#0      GATTTTTTGCGCATGGAACATCGAAAATGCCTTGATCAAAGGCATAATTAGAAAGATTGT 1786
consensus_8013#2      GATTTTTTGCGCATGGAACATCGAAAATGCCTTGATCAAAGGCATAATTAGAAAAAAAAA 643
consensus_8013#1      TAGTTAAGGGACACCTCATATCTGGTTT-TGCGGTTTGAGGATGTTTTTGTATCCGATGA 1215
                       * **   *  **    * ***     *     * *  * *   *  **  *        

consensus_8013#0      CTTGTAAAATTGGTCAAAGTTTTTGTTCCAATTCATGTAGCGATGTGTGATCCTGCGGTC 1846
consensus_8013#2      AAAAAAAA---------------------------------------------------- 651
consensus_8013#1      C----------------------------------------------------------- 1216
                                                                                  

consensus_8013#0      CTTCAATCAGCAGGAATTGTTTCTTTTTAATTAAAAAGAATGAC 1890
consensus_8013#2      --------------------------------------------
consensus_8013#1      --------------------------------------------
                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)