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Oryza sativa
cluster # 8029 cluster # 8029       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8029#0 length = 2569 sequences # 4  
consensus_8029#1 length = 749 sequences # 1  

consensusID : consensus_8029#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2569
fasta sequence
                              [CGTCGTCGTCGGCGCCGGCGATGCCCCTCCTTCTACTGCGTGCCGGCGCCGGCGCCAAGCCACCACTCTCCTTCTCCGTGCCTCCGCCTCCTGGGGATGTCCGAATAAGCAGCAGACCACCCACCACGGCCACGCGCTGCTCCTCTTCCTCTTCCCCAAAGCTCTCCTCCGCCACCGTCCAATTCCGCTCCGACTCCGACCCATGGAACCAACCCACTGTTGATGACGACGGCGACTTCGACTTGAAGGGGAGGAAGGCCATCCCCGGCATCCACGTCCCGCGCCAACGCTACATCGCCGTCTCCAAGCCCGCCCTCCTCGACGCTCTCCTCTCCCTCTTCCCATCCCAACCTCCCACTCCCTCTCCCACCTCTGCTGCGGCTGCTGACTTCAAGCGCTTTGCAAGATGCCTGGACGCCCTCCTCCACGCAGAGCACAAGGAGATGCTCGAGGAAATGCGAACCTATTACATGCTCACCCACAACCATCACCAACACACCGCTGCCGCTGATGACGATGACGATGACCAATCCGTGCTCAACGGCAACGCCAACACCACTGCTGGTTTTTTTGGCATTACAGACAACGGAACCTTGCTTCTTACCAGAAGCTTGGGTCTCAGAACACTCCTGGGATTGTCACCAGACCCTGATTCACACAACAGAATTGCTTTTGCAACTCATTTCCAGCGCTCCTTCATGAACCTTCTGCGCAATGCTCAATTTGAAGAGCTCTCTGCGCAAGACCTGCTCTTGACATAC-GCCCTAAACACCGATTACCTCTTGACTTTGCCCATTTATGTCGATTGGAAAAAGGCAGCTGAGTCCAATGCTATCATATTCAGGCGTGGGTATGCAACGGAGAGGCAGAAGGGCCTACTGTTGGTTGAAAAGCTTGATTACCTACAGTCTAAACTCTTGCAAAATATCTTCTTTGGCTTCTCCAAGCCCTTGAGGAAGCTGGGGAAATGGCTCAATGAGGCATTGAAAAGATCAACAGGGAATGAGGGATTTCAGATCTGGATTGAAAAACTTAAAGTCTGGCTTAAAGAGCAAACCTATGCGGAGAATTCGCTTTCGTTGATTGAGAACTCTTCATGGGATAAACTTAGATCTGATCAATTACCGGATGCTGATCTTCCTATTTGGATTGCTGCTCAAAGGGCAGTCTCTCGTTACGAAGGAATCCTGTCACCAGTTGGTCCTCGTGGCAGACTTCTAAGAAGATTGCTTGCTTGGACTGGTTTAATCCCTTCTCTGCCAGAAGCAACAATAAAGTCAGATATCGATACAAAAGATCTTGAAGGCTATGTGAGGCCAAATTTTCTGCCAAGAATAACACTTGCAAATATATGGGCGCCAGCAAGCAGAGAATCTTGTAACAACAATCTCTGGGAGATAACAAAAGCTTCTTTTGGTGTTTTATTTGGGAAGTCTACTCTTCAGGAACCAGCATTCCAAGAACTGATCCTACTTTATACTGATGAGGCTGATCAAAGCAAAGAGAGAGAAAAATCAGACATGATGCCATTGCAACTGAAAATTTTTGAAAGGATCCCCATCCCTGATCTGCCAGTGGTTTTTCCTCACAAGAAGTTGTCCTTCCGCATCCTAGATACAGTAAGGTTGGATATTGCTACCGTAATAGGTTTGTTGGCTTATGTCGTGAACTACAAATTTGAGAGTTTAGCCTCATCTCCATCGGCTTTTCTTCTTGATATAGTTGCCTTTACTGCACTAGCAATACTTGTGTTCCGTGTGGCGCTGGGTTACAAACAAACTAGGGATAGATACCAGCTTCTGGTCAATAAAACGCTCTATGAGAAGACATTAGCAAGTGGATTTGGTTCAGTTTATTTTCTCCTTGACGCTTCTGAGCAACAACAGTATAAAGAAGCGCTTTTGGCATATGGTATGTTACTGTGCAGGAAAAAGTATCAGGTGTCATCTCGTGTGAGCATCAGAGATACATGTGAGCAGTTTATGTACGAGAAATTTAAGGCGAAGATCGAAATGCCTATTGACAAAGCTATGGAGACACTATTGCGTCTGGGGCTGGTGATTGAGCTGCCAACTGACGGCGGCTCCCGTGTAATCGCACTTCCATGTTCAGACGCATACGAGATCCTGAAAAGCCGCTGGGACAGCTTGTTGGAACACAAGACGGAACAAGGCTGATGAAGAAGACTGTATTATTGAGATGGACGGACGTTGTCTGTATTCATCTGTGAGAACTGTTCAGTGGAGAAGTTGAAGGAAGAGGTTCCACAGCCTTGAGGTTTTGTATATGCATACAAGACTCTTGTAGCAGCAAATTAGTAGTACGTAGGTGTTGAAGAAGAAGAATATATGAAATGAAATGAAATGAAAATGTGAGATGTTGCCCATGAAATGGATGATTTGAATCAGCAGGATGTGTGAAGAACGGGCCAAATGTATATACCATACGGCCATTGGCATCTAGCCAAGCTAGTGATTTGAGATGAGAATGAGATGGTGGTGCACTTGTGTAAATGATATATTTTGCTACTACATTTATTATAGCGAAAATAATGGTATAAAAAAAAGGA]

[+] EMBL AK068490             [CGTCGTCGTCGGCGCCGGCGATGCCCCTCCTTCTACTGCGTGCCGGCGCCGGCGCCAAGCCACCACTCTCCTTCTCCGTGCCTCCGCCTCCTGGGGATGTCCGAATAAGCAGCAGACCACCCACCACGGCCACGCGCTGCTCCTCTTCCTCTTCCCCAAAGCTCTCCTCCGCCACCGTCCAATTCCGCTCCGACTCCGACCCATGGAACCAACCCACTGTTGATGACGACGGCGACTTCGACTTGAAGGGGAGGAAGGCCATCCCCGGCATCCACGTCCCGCGCCAACGCTACATCGCCGTCTCCAAGCCCGCCCTCCTCGACGCTCTCCTCTCCCTCTTCCCATCCCAACCTCCCACTCCCTCTCCCACCTCTGCTGCGGCTGCTGACTTCAAGCGCTTTGCAAGATGCCTGGACGCCCTCCTCCACGCAGAGCACAAGGAGATGCTCGAGGAAATGCGAACCTATTACATGCTCACCCACAACCATCACCAACACACCGCTGCCGCTGATGACGATGACGATGACCAATCCGTGCTCAACGGCAACGCCAACACCACTGCTGGTTTTTTTGGCATTACAGACAACGGAACCTTGCTTCTTACCAGAAGCTTGGGTCTCAGAACACTCCTGGGATTGTCACCAGACCCTGATTCACACAACAGAATTGCTTTTGCAACTCATTTCCAGCGCTCCTTCATGAACCTTCTGCGCAATGCTCAATTTGAAGAGCTCTCTGCGCAAGACCTGCTCTTGACATAC GCCCTAAACACCGATTACCTCTTGACTTTGCCCATTTATGTCGATTGGAAAAAGGCAGCTGAGTCCAATGCTATCATATTCAGGCGTGGGTATGCAACGGAGAGGCAGAAGGGCCTACTGTTGGTTGAAAAGCTTGATTACCTACAGTCTAAACTCTTGCAAAATATCTTCTTTGGCTTCTCCAAGCCCTTGAGGAAGCTGGGGAAATGGCTCAATGAGGCATTGAAAAGATCAACAGGGAATGAGGGATTTCAGATCTGGATTGAAAAACTTAAAGTCTGGCTTAAAGAGCAAACCTATGCGGAGAATTCGCTTTCGTTGATTGAGAACTCTTCATGGGATAAACTTAGATCTGATCAATTACCGGATGCTGATCTTCCTATTTGGATTGCTGCTCAAAGGGCAGTCTCTCGTTACGAAGGAATCCTGTCACCAGTTGGTCCTCGTGGCAGACTTCTAAGAAGATTGCTTGCTTGGACTGGTTTAATCCCTTCTCTGCCAGAAGCAACAATAAAGTCAGATATCGATACAAAAGATCTTGAAGGCTATGTGAGGCCAAATTTTCTGCCAAGAATAACACTTGCAAATATATGGGCGCCAGCAAGCAGAGAATCTTGTAACAACAATCTCTGGGAGATAACAAAAGCTTCTTTTGGTGTTTTATTTGGGAAGTCTACTCTTCAGGAACCAGCATTCCAAGAACTGATCCTACTTTATACTGATGAGGCTGATCAAAGCAAAGAGAGAGAAAAATCAGACATGATGCCATTGCAACTGAAAATTTTTGAAAGGATCCCCATCCCTGATCTGCCAGTGGTTTTTCCTCACAAGAAGTTGTCCTTCCGCATCCTAGATACAGTAAGGTTGGATATTGCTACCGTAATAGGTTTGTTGGCTTATGTCGTGAACTACAAATTTGAGAGTTTAGCCTCATCTCCATCGGCTTTTCTTCTTGATATAGTTGCCTTTACTGCACTAGCAATACTTGTGTTCCGTGTGGCGCTGGGTTACAAACAAACTAGGGATAGATACCAGCTTCTGGTCAATAAAACGCTCTATGAGAAGACATTAGCAAGTGGATTTGGTTCAGTTTATTTTCTCCTTGACGCTTCTGAGCAACAACAGTATAAAGAAGCGCTTTTGGCATATGGTATGTTACTGTGCAGGAAAAAGTATCAGGTGTCATCTCGTGTGAGCATCAGAGATACATGTGAGCAGTTTATGTACGAGAAATTTAAGGCGAAGATCGAAATGCCTATTGACAAAGCTATGGAGACACTATTGCGTCTGGGGCTGGTGATTGAGCTGCCAACTGACGGCGGCTCCCGTGTAATCGCACTTCCATGTTCAGACGCATACGAGATCCTGAAAAGCCGCTGGGACAGCTTGTTGGAACACAAGACGGAACAAGGCTGATGAAGAAGACTGTATTATTGAGATGGACGGACGTTGTCTGTATTCATCTGTGAGAACTGTTCAGTGGAGAAGTTGAAGGAAGAGGTTCCACAGCCTTGAGGTTTTGTATATGCATACAAGACTCTTGTAGCAGCAAATTAGTAGTACGTAGGTGTTGAAGAAGAAGAATATATGAAATGAAATGAAATGAAAATGTGAGATGTTGCCCATGAAATGGATGATTTGAATCAGCAGGATGTGTGAAGAACGGGCCAAATGTATATACCATACGGCCATTGGCATCTAGCCAAGCTAGTGATTTGAGATGAGAATGAGATGGTGGTGCACTTGTGTAAATGATATATTTTGCTACTACATTTATTATAGCGA                       ]
[+] EMBL CB673384             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GACCTGCTCCTGACATACTTCCCTAAACACCGATTACCTCTTGACTTTGCCCATTTATGTCCATTGGAAAAAGGGAGCTGAATCCAATGCTATCATATTCAGGCGTGGGTATGCAACGGAGAGGCAGAAGGGCCTACTGTTGGCTGAAAAGCTTGATTACCTACAGTCTAAACTCTTGCAAAATATCTTCTTTGGCTTCTCCAAGCCCTTGAGGAAGCTGGGGAAATGGCTCAATGAGGCATTGAAAAGATCAACAGGGAATGAGGGATTTCAGATCTGGATTGAAAAACTTAAAGTCTGGCTTAAAGAGCAAACCTATGCGGAGAATTCGCTTTCGTTGATTGAGAACTCTTCATGGGATAAACTTAGATCTGATCAATTACCGGATGCTGATCTTCCTATTTGGATTGCTGCTCAAAGGGCAGTCTCTCGTTACGAAGGAATCCTGTCACCAGTTGGTCCTCGTGGCAGACTTCTAAGAAGATTGCTTGCTTGGACTGGTTTAATCCCTTCCCTGCCAGAAGCAACAATAAAGTCAGATATCGATACCAAAGATCTTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL D42562               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CAATCTCTGGGAGATAACAAAAGCTTCTTTTGGTGTTTTATTTGGGAAGTCTACTCTTCAGGAACCAGCATTCCAAGAACTGATCCTACTTTANACTGANGAGGCTGATCAAAGCAAAGAGAGAGAAAAATCAGACATGATGCCATTGCAACTGAAAATTTTTGAAAGGATCCCCATCCCTGATCTGCCAGTGGTTTTTCCTCACAAGAAGTTGTCCTTCCGCATCCTAGATACAGTATGGTTGGATATTGCTACCGTAATAGGTTTGTTGGCTTATGTCGTGAACTACAAATTTGAGAGTTTAGCCTCACCTCCATCGGCTTTTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB618367             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACCAGTTTCTGGTCAATAAAACGCTCTATGAGAAGACATTAGCAAGTGGATTTGGTTCAGTTTATTTTCTCCTTGACGCTTCTGAGCAACAACAGTATAAAGAAGCGCTTTTGGCATATGGTATGTTACTGTGCAGGAAAAAGTATCAGGTGTCATCTCGTGTAAGCATCAGAGATACATGTGAGCAGTTTATGTACGAGAAATTTAAGGCGAAGATCGAAATGCCTATTGACAAAGCTATGGAGACACTATTGCGTCTGGGGCTGGTGATTGAGCTGCCAACTGACGGCGGCTCCCGTGTAATCGCACTTCCATGTTCAGACGCATACGAGATCCTCAAAAGCCGCTGGGACAGCTTGTTGGAACACAAGACGGAACAAGGCTGATGAAGAAGACTGTATTATTGAGATGGACGGACGTTGTCTGTATTCATCTGTGAGAACTGTTCAGTGGAGAAGTTGAAGGAAGAGGTTCCACAGCCTTGAGGTTTTGTATATGCATACAAGACTCTTGTAGCAGCAAATTAGTAGTACGTAGGTGTTGAAGAAGAAGAATATATGAAATGAAATGAAATGAAAATGTGAGATGTTGCCCATGAAATGGATGATTTGAATCAGCAGGATGTGTGAAGAACGGGCCAAATGTATATACCATACGGCCATTGGCATCTAGCCAAGCTAGTGATTTGAGATGAGAATGAGATGGTGGTGCACTTGTGTAAATGATATATTTTGGTACTACATTTATTATAGCGAAAATAATGGTATAAAAAAAAGGA]


>consensus_8029#0 CGTCGTCGTCGGCGCCGGCGATGCCCCTCCTTCTACTGCGTGCCGGCGCCGGCGCCAAGC CACCACTCTCCTTCTCCGTGCCTCCGCCTCCTGGGGATGTCCGAATAAGCAGCAGACCAC CCACCACGGCCACGCGCTGCTCCTCTTCCTCTTCCCCAAAGCTCTCCTCCGCCACCGTCC AATTCCGCTCCGACTCCGACCCATGGAACCAACCCACTGTTGATGACGACGGCGACTTCG ACTTGAAGGGGAGGAAGGCCATCCCCGGCATCCACGTCCCGCGCCAACGCTACATCGCCG TCTCCAAGCCCGCCCTCCTCGACGCTCTCCTCTCCCTCTTCCCATCCCAACCTCCCACTC CCTCTCCCACCTCTGCTGCGGCTGCTGACTTCAAGCGCTTTGCAAGATGCCTGGACGCCC TCCTCCACGCAGAGCACAAGGAGATGCTCGAGGAAATGCGAACCTATTACATGCTCACCC ACAACCATCACCAACACACCGCTGCCGCTGATGACGATGACGATGACCAATCCGTGCTCA ACGGCAACGCCAACACCACTGCTGGTTTTTTTGGCATTACAGACAACGGAACCTTGCTTC TTACCAGAAGCTTGGGTCTCAGAACACTCCTGGGATTGTCACCAGACCCTGATTCACACA ACAGAATTGCTTTTGCAACTCATTTCCAGCGCTCCTTCATGAACCTTCTGCGCAATGCTC AATTTGAAGAGCTCTCTGCGCAAGACCTGCTCTTGACATACGCCCTAAACACCGATTACC TCTTGACTTTGCCCATTTATGTCGATTGGAAAAAGGCAGCTGAGTCCAATGCTATCATAT TCAGGCGTGGGTATGCAACGGAGAGGCAGAAGGGCCTACTGTTGGTTGAAAAGCTTGATT ACCTACAGTCTAAACTCTTGCAAAATATCTTCTTTGGCTTCTCCAAGCCCTTGAGGAAGC TGGGGAAATGGCTCAATGAGGCATTGAAAAGATCAACAGGGAATGAGGGATTTCAGATCT GGATTGAAAAACTTAAAGTCTGGCTTAAAGAGCAAACCTATGCGGAGAATTCGCTTTCGT TGATTGAGAACTCTTCATGGGATAAACTTAGATCTGATCAATTACCGGATGCTGATCTTC CTATTTGGATTGCTGCTCAAAGGGCAGTCTCTCGTTACGAAGGAATCCTGTCACCAGTTG GTCCTCGTGGCAGACTTCTAAGAAGATTGCTTGCTTGGACTGGTTTAATCCCTTCTCTGC CAGAAGCAACAATAAAGTCAGATATCGATACAAAAGATCTTGAAGGCTATGTGAGGCCAA ATTTTCTGCCAAGAATAACACTTGCAAATATATGGGCGCCAGCAAGCAGAGAATCTTGTA ACAACAATCTCTGGGAGATAACAAAAGCTTCTTTTGGTGTTTTATTTGGGAAGTCTACTC TTCAGGAACCAGCATTCCAAGAACTGATCCTACTTTATACTGATGAGGCTGATCAAAGCA AAGAGAGAGAAAAATCAGACATGATGCCATTGCAACTGAAAATTTTTGAAAGGATCCCCA TCCCTGATCTGCCAGTGGTTTTTCCTCACAAGAAGTTGTCCTTCCGCATCCTAGATACAG TAAGGTTGGATATTGCTACCGTAATAGGTTTGTTGGCTTATGTCGTGAACTACAAATTTG AGAGTTTAGCCTCATCTCCATCGGCTTTTCTTCTTGATATAGTTGCCTTTACTGCACTAG CAATACTTGTGTTCCGTGTGGCGCTGGGTTACAAACAAACTAGGGATAGATACCAGCTTC TGGTCAATAAAACGCTCTATGAGAAGACATTAGCAAGTGGATTTGGTTCAGTTTATTTTC TCCTTGACGCTTCTGAGCAACAACAGTATAAAGAAGCGCTTTTGGCATATGGTATGTTAC TGTGCAGGAAAAAGTATCAGGTGTCATCTCGTGTGAGCATCAGAGATACATGTGAGCAGT TTATGTACGAGAAATTTAAGGCGAAGATCGAAATGCCTATTGACAAAGCTATGGAGACAC TATTGCGTCTGGGGCTGGTGATTGAGCTGCCAACTGACGGCGGCTCCCGTGTAATCGCAC TTCCATGTTCAGACGCATACGAGATCCTGAAAAGCCGCTGGGACAGCTTGTTGGAACACA AGACGGAACAAGGCTGATGAAGAAGACTGTATTATTGAGATGGACGGACGTTGTCTGTAT TCATCTGTGAGAACTGTTCAGTGGAGAAGTTGAAGGAAGAGGTTCCACAGCCTTGAGGTT TTGTATATGCATACAAGACTCTTGTAGCAGCAAATTAGTAGTACGTAGGTGTTGAAGAAG AAGAATATATGAAATGAAATGAAATGAAAATGTGAGATGTTGCCCATGAAATGGATGATT TGAATCAGCAGGATGTGTGAAGAACGGGCCAAATGTATATACCATACGGCCATTGGCATC TAGCCAAGCTAGTGATTTGAGATGAGAATGAGATGGTGGTGCACTTGTGTAAATGATATA TTTTGCTACTACATTTATTATAGCGAAAATAATGGTATAAAAAAAAGGA



consensusID : consensus_8029#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 749
fasta sequence
                              [AAAGCTTGATTACCTACAGTCTAAACTCTTGCAAAATATCTTCTTTGGCTTCTCCAAGCCCTTGAGGAAGCTGGGGAAATGGCTCAATGAGTTCATGGCAGGCATTGAAAAGATCAACAGGGAATGAGGGATTTCAGATCTGGATTGAAAAACTTAAAGTCTGGCTTAAAGAGCAAACCTATGCGGAGAATTCGCTTTCGTTGATTGAGAACTCTTCATGGGATAAACTTAGATCTGATCAATTACCGGATGCTGATCTTCCTATTTGGATTGCTGCTCAAAGGGCAGTCTCTCGTTACGAAGGAATCCTGTCACCAGTTGGTCCTCGTGGCAGACTTCTAAGAAGATTGCTTACTTGGACTGGTTTAATCCCTTCTCTGCCAGAAGCAACAATAAAGTCAGATATCGATACAAAAGATCTTGAAGGCTATGTGAGGCCAAATTTTCTGCCAAGAATAACACTTGCAAATATATGGGCGCCAGCAAGCAGAGAATCTTGTAACAACAATCTCTGGGAGATAACAAAAGCTTCTTTTGGTGTTTTATTTGGGAAGTCTACTCTTCAGGAACCAGCATTCCAAGAACTGATCCTACTTTATACTGATGAGGCTGATCAAAGCAAAGAGAGAGAAAAATCAGACATGATGCCATTGCAACTGAAAATTTTTGAAAGGATCCCCATCCCTGATCTGCCAGTGGTTTTTCCTCACAAGAAGTTGTCCTTCCGCATCCTAAATACAGTAAGGTTG]

[+] EMBL CB618366             [AAAGCTTGATTACCTACAGTCTAAACTCTTGCAAAATATCTTCTTTGGCTTCTCCAAGCCCTTGAGGAAGCTGGGGAAATGGCTCAATGAGTTCATGGCAGGCATTGAAAAGATCAACAGGGAATGAGGGATTTCAGATCTGGATTGAAAAACTTAAAGTCTGGCTTAAAGAGCAAACCTATGCGGAGAATTCGCTTTCGTTGATTGAGAACTCTTCATGGGATAAACTTAGATCTGATCAATTACCGGATGCTGATCTTCCTATTTGGATTGCTGCTCAAAGGGCAGTCTCTCGTTACGAAGGAATCCTGTCACCAGTTGGTCCTCGTGGCAGACTTCTAAGAAGATTGCTTACTTGGACTGGTTTAATCCCTTCTCTGCCAGAAGCAACAATAAAGTCAGATATCGATACAAAAGATCTTGAAGGCTATGTGAGGCCAAATTTTCTGCCAAGAATAACACTTGCAAATATATGGGCGCCAGCAAGCAGAGAATCTTGTAACAACAATCTCTGGGAGATAACAAAAGCTTCTTTTGGTGTTTTATTTGGGAAGTCTACTCTTCAGGAACCAGCATTCCAAGAACTGATCCTACTTTATACTGATGAGGCTGATCAAAGCAAAGAGAGAGAAAAATCAGACATGATGCCATTGCAACTGAAAATTTTTGAAAGGATCCCCATCCCTGATCTGCCAGTGGTTTTTCCTCACAAGAAGTTGTCCTTCCGCATCCTAAATACAGTAAGGTTG]


>consensus_8029#1 AAAGCTTGATTACCTACAGTCTAAACTCTTGCAAAATATCTTCTTTGGCTTCTCCAAGCC CTTGAGGAAGCTGGGGAAATGGCTCAATGAGTTCATGGCAGGCATTGAAAAGATCAACAG GGAATGAGGGATTTCAGATCTGGATTGAAAAACTTAAAGTCTGGCTTAAAGAGCAAACCT ATGCGGAGAATTCGCTTTCGTTGATTGAGAACTCTTCATGGGATAAACTTAGATCTGATC AATTACCGGATGCTGATCTTCCTATTTGGATTGCTGCTCAAAGGGCAGTCTCTCGTTACG AAGGAATCCTGTCACCAGTTGGTCCTCGTGGCAGACTTCTAAGAAGATTGCTTACTTGGA CTGGTTTAATCCCTTCTCTGCCAGAAGCAACAATAAAGTCAGATATCGATACAAAAGATC TTGAAGGCTATGTGAGGCCAAATTTTCTGCCAAGAATAACACTTGCAAATATATGGGCGC CAGCAAGCAGAGAATCTTGTAACAACAATCTCTGGGAGATAACAAAAGCTTCTTTTGGTG TTTTATTTGGGAAGTCTACTCTTCAGGAACCAGCATTCCAAGAACTGATCCTACTTTATA CTGATGAGGCTGATCAAAGCAAAGAGAGAGAAAAATCAGACATGATGCCATTGCAACTGA AAATTTTTGAAAGGATCCCCATCCCTGATCTGCCAGTGGTTTTTCCTCACAAGAAGTTGT CCTTCCGCATCCTAAATACAGTAAGGTTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8029#0      CGTCGTCGTCGGCGCCGGCGATGCCCCTCCTTCTACTGCGTGCCGGCGCCGGCGCCAAGC 60
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      CACCACTCTCCTTCTCCGTGCCTCCGCCTCCTGGGGATGTCCGAATAAGCAGCAGACCAC 120
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      CCACCACGGCCACGCGCTGCTCCTCTTCCTCTTCCCCAAAGCTCTCCTCCGCCACCGTCC 180
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      AATTCCGCTCCGACTCCGACCCATGGAACCAACCCACTGTTGATGACGACGGCGACTTCG 240
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      ACTTGAAGGGGAGGAAGGCCATCCCCGGCATCCACGTCCCGCGCCAACGCTACATCGCCG 300
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      TCTCCAAGCCCGCCCTCCTCGACGCTCTCCTCTCCCTCTTCCCATCCCAACCTCCCACTC 360
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      CCTCTCCCACCTCTGCTGCGGCTGCTGACTTCAAGCGCTTTGCAAGATGCCTGGACGCCC 420
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      TCCTCCACGCAGAGCACAAGGAGATGCTCGAGGAAATGCGAACCTATTACATGCTCACCC 480
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      ACAACCATCACCAACACACCGCTGCCGCTGATGACGATGACGATGACCAATCCGTGCTCA 540
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      ACGGCAACGCCAACACCACTGCTGGTTTTTTTGGCATTACAGACAACGGAACCTTGCTTC 600
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      TTACCAGAAGCTTGGGTCTCAGAACACTCCTGGGATTGTCACCAGACCCTGATTCACACA 660
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      ACAGAATTGCTTTTGCAACTCATTTCCAGCGCTCCTTCATGAACCTTCTGCGCAATGCTC 720
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      AATTTGAAGAGCTCTCTGCGCAAGACCTGCTCTTGACATACGCCCTAAACACCGATTACC 780
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      TCTTGACTTTGCCCATTTATGTCGATTGGAAAAAGGCAGCTGAGTCCAATGCTATCATAT 840
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      TCAGGCGTGGGTATGCAACGGAGAGGCAGAAGGGCCTACTGTTGGTTGAAAAGCTTGATT 900
consensus_8029#1      -------------------------------------------------AAAGCTTGATT 11
                                                                       ***********

consensus_8029#0      ACCTACAGTCTAAACTCTTGCAAAATATCTTCTTTGGCTTCTCCAAGCCCTTGAGGAAGC 960
consensus_8029#1      ACCTACAGTCTAAACTCTTGCAAAATATCTTCTTTGGCTTCTCCAAGCCCTTGAGGAAGC 71
                      ************************************************************

consensus_8029#0      TGGGGAAATGGCTCAATGAG----------GCATTGAAAAGATCAACAGGGAATGAGGGA 1010
consensus_8029#1      TGGGGAAATGGCTCAATGAGTTCATGGCAGGCATTGAAAAGATCAACAGGGAATGAGGGA 131
                      ********************          ******************************

consensus_8029#0      TTTCAGATCTGGATTGAAAAACTTAAAGTCTGGCTTAAAGAGCAAACCTATGCGGAGAAT 1070
consensus_8029#1      TTTCAGATCTGGATTGAAAAACTTAAAGTCTGGCTTAAAGAGCAAACCTATGCGGAGAAT 191
                      ************************************************************

consensus_8029#0      TCGCTTTCGTTGATTGAGAACTCTTCATGGGATAAACTTAGATCTGATCAATTACCGGAT 1130
consensus_8029#1      TCGCTTTCGTTGATTGAGAACTCTTCATGGGATAAACTTAGATCTGATCAATTACCGGAT 251
                      ************************************************************

consensus_8029#0      GCTGATCTTCCTATTTGGATTGCTGCTCAAAGGGCAGTCTCTCGTTACGAAGGAATCCTG 1190
consensus_8029#1      GCTGATCTTCCTATTTGGATTGCTGCTCAAAGGGCAGTCTCTCGTTACGAAGGAATCCTG 311
                      ************************************************************

consensus_8029#0      TCACCAGTTGGTCCTCGTGGCAGACTTCTAAGAAGATTGCTTGCTTGGACTGGTTTAATC 1250
consensus_8029#1      TCACCAGTTGGTCCTCGTGGCAGACTTCTAAGAAGATTGCTTACTTGGACTGGTTTAATC 371
                      ****************************************** *****************

consensus_8029#0      CCTTCTCTGCCAGAAGCAACAATAAAGTCAGATATCGATACAAAAGATCTTGAAGGCTAT 1310
consensus_8029#1      CCTTCTCTGCCAGAAGCAACAATAAAGTCAGATATCGATACAAAAGATCTTGAAGGCTAT 431
                      ************************************************************

consensus_8029#0      GTGAGGCCAAATTTTCTGCCAAGAATAACACTTGCAAATATATGGGCGCCAGCAAGCAGA 1370
consensus_8029#1      GTGAGGCCAAATTTTCTGCCAAGAATAACACTTGCAAATATATGGGCGCCAGCAAGCAGA 491
                      ************************************************************

consensus_8029#0      GAATCTTGTAACAACAATCTCTGGGAGATAACAAAAGCTTCTTTTGGTGTTTTATTTGGG 1430
consensus_8029#1      GAATCTTGTAACAACAATCTCTGGGAGATAACAAAAGCTTCTTTTGGTGTTTTATTTGGG 551
                      ************************************************************

consensus_8029#0      AAGTCTACTCTTCAGGAACCAGCATTCCAAGAACTGATCCTACTTTATACTGATGAGGCT 1490
consensus_8029#1      AAGTCTACTCTTCAGGAACCAGCATTCCAAGAACTGATCCTACTTTATACTGATGAGGCT 611
                      ************************************************************

consensus_8029#0      GATCAAAGCAAAGAGAGAGAAAAATCAGACATGATGCCATTGCAACTGAAAATTTTTGAA 1550
consensus_8029#1      GATCAAAGCAAAGAGAGAGAAAAATCAGACATGATGCCATTGCAACTGAAAATTTTTGAA 671
                      ************************************************************

consensus_8029#0      AGGATCCCCATCCCTGATCTGCCAGTGGTTTTTCCTCACAAGAAGTTGTCCTTCCGCATC 1610
consensus_8029#1      AGGATCCCCATCCCTGATCTGCCAGTGGTTTTTCCTCACAAGAAGTTGTCCTTCCGCATC 731
                      ************************************************************

consensus_8029#0      CTAGATACAGTAAGGTTGGATATTGCTACCGTAATAGGTTTGTTGGCTTATGTCGTGAAC 1670
consensus_8029#1      CTAAATACAGTAAGGTTG------------------------------------------ 749
                      *** **************                                          

consensus_8029#0      TACAAATTTGAGAGTTTAGCCTCATCTCCATCGGCTTTTCTTCTTGATATAGTTGCCTTT 1730
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      ACTGCACTAGCAATACTTGTGTTCCGTGTGGCGCTGGGTTACAAACAAACTAGGGATAGA 1790
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      TACCAGCTTCTGGTCAATAAAACGCTCTATGAGAAGACATTAGCAAGTGGATTTGGTTCA 1850
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      GTTTATTTTCTCCTTGACGCTTCTGAGCAACAACAGTATAAAGAAGCGCTTTTGGCATAT 1910
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      GGTATGTTACTGTGCAGGAAAAAGTATCAGGTGTCATCTCGTGTGAGCATCAGAGATACA 1970
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      TGTGAGCAGTTTATGTACGAGAAATTTAAGGCGAAGATCGAAATGCCTATTGACAAAGCT 2030
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      ATGGAGACACTATTGCGTCTGGGGCTGGTGATTGAGCTGCCAACTGACGGCGGCTCCCGT 2090
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      GTAATCGCACTTCCATGTTCAGACGCATACGAGATCCTGAAAAGCCGCTGGGACAGCTTG 2150
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      TTGGAACACAAGACGGAACAAGGCTGATGAAGAAGACTGTATTATTGAGATGGACGGACG 2210
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      TTGTCTGTATTCATCTGTGAGAACTGTTCAGTGGAGAAGTTGAAGGAAGAGGTTCCACAG 2270
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      CCTTGAGGTTTTGTATATGCATACAAGACTCTTGTAGCAGCAAATTAGTAGTACGTAGGT 2330
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      GTTGAAGAAGAAGAATATATGAAATGAAATGAAATGAAAATGTGAGATGTTGCCCATGAA 2390
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      ATGGATGATTTGAATCAGCAGGATGTGTGAAGAACGGGCCAAATGTATATACCATACGGC 2450
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      CATTGGCATCTAGCCAAGCTAGTGATTTGAGATGAGAATGAGATGGTGGTGCACTTGTGT 2510
consensus_8029#1      ------------------------------------------------------------
                                                                                  

consensus_8029#0      AAATGATATATTTTGCTACTACATTTATTATAGCGAAAATAATGGTATAAAAAAAAGGA 2569
consensus_8029#1      -----------------------------------------------------------
                                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)