cluster # 8037

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Oryza sativa
cluster # 8037 cluster # 8037 Sequences # 5 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8037#0 length = 583 sequences # 5

consensusID : consensus_8037#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 583
fasta sequence

                              [CCCTTCCCGGAGTTAGCGCCGCCGGCCGGAGGAGGAGAAGAGAGAGAGAGAGGCCGAGGTTTTCCGGTGAGGAGGATGGGCGAGTTCGACGACTACTGGGCGCGGGCGTACAGGGGCGACTCCGGGGTGCCGCACTCCGACCCGCAGCGGCTGGTCACCACCTGGACCGGCGCCTTCGCCCTCGGCGCCGCCGCC-TGCGTCCACCACCACGCCTCCGCCCTC-GCCTCCAACATCAAGTCCCTCCCCCA-CTACTGGCAAGACATGACAATGATGCTCGATCAAAAGCGCTGGAAGAAGATTCTTGAGAAGAAGCAACAGCAAGCTTAAGGAAGTGTTGAAGCTGTAAACAAATTGCAACGGATAGACTTTTTCTATTTGGCATTTTCTTCCGTACCTTTACAACT-TCACAT-ATGTTTTCAATACAGAACTGGTTGATTTGTTTAACCTTCACCCCTAATATTCT-CGTAATGCAAGTGTT-GGACGTCTTATTCA-RGTTCTTAGGCAGCGTGTTTTTTTCAATGATATGCACATAAGTCTACCCTTAATGTGTGTTCTCGCTATGCGTTTATGTGCCAAAAAAAAA]

[+] EMBL AK120432             [CCCTTCCCGGAGTTAGCGCCGCCGGCCGGAGGAGGAGAAGAGAGAGAGAGAGGCCGAGGTTTTCCGGTGAGGAGGATGGGCGAGTTCGACGACTACTGGGCGCGGGCGTACAGGGGCGACTCCGGGGTGCCGCACTCCGACCCGCAGCGGCTGGTCACCACCTGGACCGGCGCCTTCGCCCTCGGCGCCGCCGCC TGCGTCCACCACCACGCCTCCGCCCTC GCCTCCAACATCAAGTCCCTCCCCCA CTACTGGCAAGACATGACAATGATGCTCGATCAAAAGCGCTGGAAGAAGATTCTTGAGAAGAAGCAACAGCAAGCTTAAGGAAGTGTTGAAGCTGTAAACAAATTGCAACGGATAGACTTTTTCTATTTGGCATTTTCTTCCGTACCTTTACAACT TCACAT ATGTTTTCAATACAGAACTGGTTGATTTGTTTAACCTTCACCCCTAATATTCT CGTAATGCAAGTGT                                                                                                            ]
[+] EMBL AK062224             [                                                         GGTTTTCCGGTGAGGAGGATGGGCGAGTTCGACGACTACTGGGCGCGGGCGTACAGGGGCGACTCCGGGGTGCCGCACTCCGACCCGCAGCGGCTGGTCACCACCTGGACCGGCGCCTTCGCCCTCGGCGCCGCCGCC TGCGTCCACCACCACGCCTCCGCCCTC GCCTCCAACATCAAGTCCCTCCCCCA CTACTGGCAAGACATGACAATGATGCTCGATCAAAAGCGCTGGAAGAAGATTCTTGAGAAGAAGCAACAGCAAGCTTAAGGAAGTGTTGAAGCTGTAAACAAATTGCAACGGATAGACTTTTTCTATTTGGCATTTTCTTCCGTACCTTTACAACT TCACAT ATGTTTTCAATACAGAACTGGTTGATTTGTTTAACCTTCACCCCTAATATTCT CGTAATGCAAGTGTT GGACGTCTTAT                                                                                               ]
[+] EMBL AA752518             [                                                                                                                            GGGTGCCGCACTCCGACCCGCAGCGGCTGGTCACCACCTGGACCGGCGCCTTCGCCCTCGGGCCCGCCGCCTTGCGTCCACCACCACGCCTYCGSCCTC GSCTCCAACATCAAGTCCCTYCCCCA CTACTGGCAAGACATGACAATGATGCTCGATCAAAAGCGCTGGAAGAAGATTCTTGAGAAGAAGCAACAGCMAGCTTAAGGAAGTGTTGAAGCTGT AAMMAATTGCAACGGAWAGACTTTTTCTATTTGGSA TTTCTTCCGTACCTTTACAACT TCACATAATGTTTTCAATACAGAACTGGTTGATTTKTTTAACCTTCACCCCTHATAATCTYSGTAABASAAGTGTTGGGACGTCTTTATCA RGTT                                                                                       ]
[+] EMBL BI806284             [                                                                                                                                                               ACCTGGACCGGCGCCTTCGCCCTCGGCGCCTCCGCC TGCGTCCACCACCACGCCTCCGCCCTCGGCCTCC ACATCAAGTCCCTCCCCCACCTACTGGCAAGACATGACCATGATGCTCGATCCAAAGCGCTGGAAGAAGATTCTTGAGAAGAAGC ACAGCAAGCTTAAGGAAGTGTTGAAGCTGTAAACNAATTGC ACGGATAGACTTTTTCTATTTGGCATTTTCTTCCGTACCTTTACAACTGTCACAT ATGTNTTCAATACAGAACTGGTTGATTTGTTTAACCTTCACCCCTAATATTCT CGTAATGCAAGTGTT GGACGTCTTA TCAGTTTTCTTAGGCAGCGTGTTTTTTTCAATGATATGCACATAAGTCTACCCTTAATGTGTGTTCTCGCTATGCGTTTATGTGCCAAAAAAAAA]
[+] EMBL CB679705             [                                                                                                                                                                                                                                                                                                          AGACTTTTGAGAAGAAGCAACAGCAAGCTTAAGGAAGTGTTGAAGCTGTAAACAAATTGCAACGGATAGACTTTTTCTATTTGGCATTTTCTTCCGTACCTTTACAACT TCACAT ATGTTTTCAATACAGAACTGGTTGATTTGTTTAACCTTCACCCCTAATATTCT CGTAATGCAAGTGTT GGACGTCTTAT                                                                                               ]




>consensus_8037#0
CCCTTCCCGGAGTTAGCGCCGCCGGCCGGAGGAGGAGAAGAGAGAGAGAGAGGCCGAGGT
TTTCCGGTGAGGAGGATGGGCGAGTTCGACGACTACTGGGCGCGGGCGTACAGGGGCGAC
TCCGGGGTGCCGCACTCCGACCCGCAGCGGCTGGTCACCACCTGGACCGGCGCCTTCGCC
CTCGGCGCCGCCGCCTGCGTCCACCACCACGCCTCCGCCCTCGCCTCCAACATCAAGTCC
CTCCCCCACTACTGGCAAGACATGACAATGATGCTCGATCAAAAGCGCTGGAAGAAGATT
CTTGAGAAGAAGCAACAGCAAGCTTAAGGAAGTGTTGAAGCTGTAAACAAATTGCAACGG
ATAGACTTTTTCTATTTGGCATTTTCTTCCGTACCTTTACAACTTCACATATGTTTTCAA
TACAGAACTGGTTGATTTGTTTAACCTTCACCCCTAATATTCTCGTAATGCAAGTGTTGG
ACGTCTTATTCARGTTCTTAGGCAGCGTGTTTTTTTCAATGATATGCACATAAGTCTACC
CTTAATGTGTGTTCTCGCTATGCGTTTATGTGCCAAAAAAAAA

clustalw multiple alignements is not computed in this case