cluster # 8064

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Oryza sativa
cluster # 8064 cluster # 8064 Sequences # 5 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8064#0 length = 518 sequences # 5

consensusID : consensus_8064#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 518
fasta sequence

                              [CCTGACAATGAAGCGGCAAATTGTGCATATGATAAAGTACAAGTATGTCCCATTCAGCATAGGAAAGCAGAAATATGGTGGAAAGAAAGGCCCGGGAGCCAGTACGTCTAAAGACTGAGACCTGGATTGCAGAT-CCCT-GTGTTGCTCTT-GAGGCAACATGCTGGCATGGTGGTTTTTTGGTACCAGCTACTGACAGTGGATGTACACCTCCATTCGCTAGTCGAGAGGAGCTTAAAGAGACTTTGCATCGGTTGATGACCATTTGTGTTGTATATCAGATTCTTCTGTGCAATGACTCGTTCATTTATAGTTCTTGTGCTGTGCGGCTCTTGTGTGGACGAGTAATGAACCTATTGAGTCAGGTGCAATGCAAATCAAAACTATTGGGGCTTGACAT-GGATTTGTACT-GGAATTCAACATGCTCGTTTCCAGACGGGGCCCTTAATTACTCGCATGTTAGTAACACATTTGTTATTCTATTTAGAGTCCTATGAAGGTTGTCTGTTTTGTGTAAAAAA]

[+] EMBL AU108193             [CCTGACAATGAAGCGGCAAATTGTGCATATGATAAAGTACAAGTATGTCCCATTCAGCATAGGAAAGCAGAAATATGGTGGAAAGAAAGGCCCGGGAGCCAGTACGTCTAAAGACTGAGACCTGGATTGCAGAT CCCT GTGTTGCTCTT GAGGCAACATGCTGGCATGGTGGTTTTTTGGTACCAGCTACTGACAGTGGATGTACACCTCCATTCGCTAGTCGAGAGGAGCTTAAAGAGACTTTGCATCGGTTGATGACCATTTGTGTTGTATATCAGATTCTTCTGTGCAATGACTCGTTCATTTATAGTTCTTGTGCTGTGCGGCTCTTGTGTGGACGAGTAATGAACCTATTGAGTCAGGTGCAATGCAAATCAAAACTATTGGGGCTTGACATGGGATTTGTACTGGGAATTCAACATGCTCGTTTCCAGACGGGGCCCCTA                                                                          ]
[+] EMBL OSR17821A            [CCTGACAATGAAGCGGCAAATTGTGCATATGATAAAGTACAAGTATGTCCCATTCAGCATAGGAAAGCAGAAATATGGTGGAAAGAAAGGCCCGGGAGCCAGTACGTCTAAAGACTGAGACCTGGATTGCAGAT CCCT GTGTNACTCTT GAGGCAACATGCTGGCATGGTGGTTTTTTGGTACCAGCTACTGACAGTGGATGTACACCTCCATTCGCTAGTCGAGNGGAGCTTAAAGAGACTTTGCATCGGTTGATGACCATTTGTGTTGTATATCAGATTCTTCTGTNCAATGACTCGTTCATTTATAGTTCTTGTGCTGTGCGGCTCTTGTGTGGA                                                                                                                                                                                      ]
[+] EMBL AU031793             [                                                                              TGGAAAGAAAGGCCCGGGAGCCAGTACGTCTAAAGACTGAGACNTGGATTGCAGATCCCCTGGTGTTGCTCTTGGAGGCAACATGCTGGCATGGTGGTTTTTTGGTACCAGCTACTGACAGTGGATGTACACCTCCATTCGCTAGTCGAGAGGAGCTTAAAGAGACTTTGCATCGGTTGATGACCATTTGTGTTGTATATCAGATTCTTCTGTGCAATGACTCGTTCATTTATAGTTCTTGTGCTGTGCGGCTCTTGTGTGGACGAGTAATGAACCTATTGAGTCAGGTGCAATGCAAATCAAAACTATTGGGGCTTGACAT GGATTTGTACT GGAATTCAACATGCTCGTTTCCAGACGGGGCCCTTAATTACTCGCATGTTAGTAACACATTTGTTATTCTATTTAGAGTCCTATGAAGGTTGTCTGTTTTGTGTAAAAAA]
[+] EMBL AU056812             [                                                                                       AGGCCCGGGANCCAGTACGTCTAAAGACTGAGACCTGGATTGCAGAT CCCT GTGTTGCTCTT GAGGCAACANGCTGGCATGGTGGTTTTTTGGTACCAGCTACTGACAGTGGATGTACACCTCCATTCGCTAGTCGAGAGGAGCTTAAAGAGACTTTGCATCGGTTGATGACCATTTGTGTTGTATATCAGATTCTTCTGTGCAATGACTCGTTCATTTATAGTTCTTGTGCTGTGCGGCTCTTGTGTGGACGAGTAATGAACCTATTGAGTCAGGTGCAATGCAAATCAAAACTATTGGGGCTTGACAT GGATTTGTACT GGAATTCAACATGCTCGTTTCCAGACGGGGCCCTTAATTACTCGCATGTTAGTAACACATTTGTTATTCTATTTAGAGTCCTATGAAGGTTGTCTGTTTaaaaaaa    ]
[+] EMBL AU032171             [                                                                                                                                                                                         CCAGCTACTGACAGTGGATGTACACCTCCANTCGCTAGTCGNGAGGAGCTTAAAGAGACTTTGCATCGGTTGATGACCATTTGTGTTGTATATCAGATTCTTCTGTGCAATGACTCGTTCATTTATAGTTCTTGTGCTGTGCGGNTCTTGTNTGGACGAGTAATGAACCTATTGANTCAGGTGCAATGCAAATCAAAACTATTGGGGCTTGACAT GGATTTGTANT NGAATTCAACATGCTCGTTTCCAGACGGGGCCCTTAATTACTCGCATGTTAGTAACACATTTGTTATTCTATTTAGAGTCCTATGAAGGTTGTCTGTTTTGTGTAAAAAA]




>consensus_8064#0
CCTGACAATGAAGCGGCAAATTGTGCATATGATAAAGTACAAGTATGTCCCATTCAGCAT
AGGAAAGCAGAAATATGGTGGAAAGAAAGGCCCGGGAGCCAGTACGTCTAAAGACTGAGA
CCTGGATTGCAGATCCCTGTGTTGCTCTTGAGGCAACATGCTGGCATGGTGGTTTTTTGG
TACCAGCTACTGACAGTGGATGTACACCTCCATTCGCTAGTCGAGAGGAGCTTAAAGAGA
CTTTGCATCGGTTGATGACCATTTGTGTTGTATATCAGATTCTTCTGTGCAATGACTCGT
TCATTTATAGTTCTTGTGCTGTGCGGCTCTTGTGTGGACGAGTAATGAACCTATTGAGTC
AGGTGCAATGCAAATCAAAACTATTGGGGCTTGACATGGATTTGTACTGGAATTCAACAT
GCTCGTTTCCAGACGGGGCCCTTAATTACTCGCATGTTAGTAACACATTTGTTATTCTAT
TTAGAGTCCTATGAAGGTTGTCTGTTTTGTGTAAAAAA

clustalw multiple alignements is not computed in this case