These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8064#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 518 fasta sequence [CCTGACAATGAAGCGGCAAATTGTGCATATGATAAAGTACAAGTATGTCCCATTCAGCATAGGAAAGCAGAAATATGGTGGAAAGAAAGGCCCGGGAGCCAGTACGTCTAAAGACTGAGACCTGGATTGCAGAT-CCCT-GTGTTGCTCTT-GAGGCAACATGCTGGCATGGTGGTTTTTTGGTACCAGCTACTGACAGTGGATGTACACCTCCATTCGCTAGTCGAGAGGAGCTTAAAGAGACTTTGCATCGGTTGATGACCATTTGTGTTGTATATCAGATTCTTCTGTGCAATGACTCGTTCATTTATAGTTCTTGTGCTGTGCGGCTCTTGTGTGGACGAGTAATGAACCTATTGAGTCAGGTGCAATGCAAATCAAAACTATTGGGGCTTGACAT-GGATTTGTACT-GGAATTCAACATGCTCGTTTCCAGACGGGGCCCTTAATTACTCGCATGTTAGTAACACATTTGTTATTCTATTTAGAGTCCTATGAAGGTTGTCTGTTTTGTGTAAAAAA] [+] EMBL AU108193 [CCTGACAATGAAGCGGCAAATTGTGCATATGATAAAGTACAAGTATGTCCCATTCAGCATAGGAAAGCAGAAATATGGTGGAAAGAAAGGCCCGGGAGCCAGTACGTCTAAAGACTGAGACCTGGATTGCAGAT CCCT GTGTTGCTCTT GAGGCAACATGCTGGCATGGTGGTTTTTTGGTACCAGCTACTGACAGTGGATGTACACCTCCATTCGCTAGTCGAGAGGAGCTTAAAGAGACTTTGCATCGGTTGATGACCATTTGTGTTGTATATCAGATTCTTCTGTGCAATGACTCGTTCATTTATAGTTCTTGTGCTGTGCGGCTCTTGTGTGGACGAGTAATGAACCTATTGAGTCAGGTGCAATGCAAATCAAAACTATTGGGGCTTGACATGGGATTTGTACTGGGAATTCAACATGCTCGTTTCCAGACGGGGCCCCTA ] [+] EMBL OSR17821A [CCTGACAATGAAGCGGCAAATTGTGCATATGATAAAGTACAAGTATGTCCCATTCAGCATAGGAAAGCAGAAATATGGTGGAAAGAAAGGCCCGGGAGCCAGTACGTCTAAAGACTGAGACCTGGATTGCAGAT CCCT GTGTNACTCTT GAGGCAACATGCTGGCATGGTGGTTTTTTGGTACCAGCTACTGACAGTGGATGTACACCTCCATTCGCTAGTCGAGNGGAGCTTAAAGAGACTTTGCATCGGTTGATGACCATTTGTGTTGTATATCAGATTCTTCTGTNCAATGACTCGTTCATTTATAGTTCTTGTGCTGTGCGGCTCTTGTGTGGA ] [+] EMBL AU031793 [ TGGAAAGAAAGGCCCGGGAGCCAGTACGTCTAAAGACTGAGACNTGGATTGCAGATCCCCTGGTGTTGCTCTTGGAGGCAACATGCTGGCATGGTGGTTTTTTGGTACCAGCTACTGACAGTGGATGTACACCTCCATTCGCTAGTCGAGAGGAGCTTAAAGAGACTTTGCATCGGTTGATGACCATTTGTGTTGTATATCAGATTCTTCTGTGCAATGACTCGTTCATTTATAGTTCTTGTGCTGTGCGGCTCTTGTGTGGACGAGTAATGAACCTATTGAGTCAGGTGCAATGCAAATCAAAACTATTGGGGCTTGACAT GGATTTGTACT GGAATTCAACATGCTCGTTTCCAGACGGGGCCCTTAATTACTCGCATGTTAGTAACACATTTGTTATTCTATTTAGAGTCCTATGAAGGTTGTCTGTTTTGTGTAAAAAA] [+] EMBL AU056812 [ AGGCCCGGGANCCAGTACGTCTAAAGACTGAGACCTGGATTGCAGAT CCCT GTGTTGCTCTT GAGGCAACANGCTGGCATGGTGGTTTTTTGGTACCAGCTACTGACAGTGGATGTACACCTCCATTCGCTAGTCGAGAGGAGCTTAAAGAGACTTTGCATCGGTTGATGACCATTTGTGTTGTATATCAGATTCTTCTGTGCAATGACTCGTTCATTTATAGTTCTTGTGCTGTGCGGCTCTTGTGTGGACGAGTAATGAACCTATTGAGTCAGGTGCAATGCAAATCAAAACTATTGGGGCTTGACAT GGATTTGTACT GGAATTCAACATGCTCGTTTCCAGACGGGGCCCTTAATTACTCGCATGTTAGTAACACATTTGTTATTCTATTTAGAGTCCTATGAAGGTTGTCTGTTTaaaaaaa ] [+] EMBL AU032171 [ CCAGCTACTGACAGTGGATGTACACCTCCANTCGCTAGTCGNGAGGAGCTTAAAGAGACTTTGCATCGGTTGATGACCATTTGTGTTGTATATCAGATTCTTCTGTGCAATGACTCGTTCATTTATAGTTCTTGTGCTGTGCGGNTCTTGTNTGGACGAGTAATGAACCTATTGANTCAGGTGCAATGCAAATCAAAACTATTGGGGCTTGACAT GGATTTGTANT NGAATTCAACATGCTCGTTTCCAGACGGGGCCCTTAATTACTCGCATGTTAGTAACACATTTGTTATTCTATTTAGAGTCCTATGAAGGTTGTCTGTTTTGTGTAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||