These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8068#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3381 fasta sequence [TCGCACCCCGCAAAACCTAGCCCCAGGTCCTCTCCTCCCCTCCGCCTTGCCGCATTACCCCCAGATCCACCGCCTCCGGCCCAGATCCACCCATGCGCCTCCCGGTGCTACTCCCGCTGCTGCTGCTGCTGCTCGCCGCGGCAGCGGCGGTGGCGGCGGCGGAAGCGGCGACGCTTTCGGCGAGGATGGTGCACCGGCTGTCCGACGAGGCTCGGCTCGCGGCGGGCGCGCGTGGGGGGCGGCGCTGGCCCCGTCGCGGGAGCGGGGATTACTTCCGCGCGCTGGTGCGGAGCGACCTCCAGCGGCAGAAGCGGCGGGTCGGCGGCAAGTACCAGCTCCTCTCCCTCTCCCAGGGCGGCAGTATCTTCCCCTCCGGCAACGACTTGGGCTGGTTATACTACACTTGGGTGGACGTTGGGACGCCAAATACTTCCTTCCTGGTCGCATTGGATACTGGAAGTGACTTGTTTTGGGTGCCTTGTGATTGTATCCAATGTGCGCCATTGTCCAGCTACCATGGAAGTTTGGATAGAAATCTTGGGATTTACAAGCCATCTGAATCAACTACAAGTCGGCATCTGCCCTGTAGCCATGAGCTTTGCTCACCGGCTTCAGGTTGCACAAACCCGAAGCAGCCTTGTCCATACAATATTGACTACTTTTCAGAAAATACAACCAGCTCCGGTTTGCTAATTGAGGATATATTACACTTGGATTCTAGGGAGGGCCATGCACCTGTGAATGCTTCTGTCATTATAGGCTGTGGTAAAAAGCAGAGTGGTAGCTATTTGGAAGGTATTGCACCAGATGGACTTCTTGGTCTTGGAATGGCAGATATCTCAGTACCTAGTTTCCTTGCAAGAGCTGGATTAGTACGAAATTCCTTTTCAATGTGTTTCAAGAAAGATGATTCTGGGAGAATTTTCTTTGGTGATCAAGGAGTACCTACCCAACAGTCTACACCATTTGTCCCGATGAATGGCAAGCTTCAGACTTATGCTGTTAATGTTGACAAATATTGTATTGGACATAAGTGTACGGAGGGAGCTGGCTTCCAGGCATTAGTAGACACTGGAACATCCTTCACCAGTCTTCCCCTCGATGCCTACAAGAGTATCACTATGGAGTTCGACAAACAAATCAATGCATCAAGAGCATCTTCTGATGATTATTCTTTCGAATATTGCTACAGCACCGGTCCTCTTGAGATGCCTGATGTTCCAACTATAACTCTGACTTTTGCTGAGAACAAGAGTTTCCAGGCTGTTAATCCTATACTTCCATTTAATGACAGACAGGGAGAATTTGCTGTCTTTTGCTTAGCAGTACTACCATCACCTGAACCTGTTGGGATTATTGGGCAGAATTTCATGGTTGGCTATCACGTAGTTTTTGACAGAGAAAATATGAAGCTGGGCTGGTACCGCTCTGAATGCCATGATCTTGACAACAGCACGACGGTGTCCTTAGGTCCATCACAGCATAACAGTCCAGAGGACCCCCTACCGTCAAACGAGCAGCAGACCTCTCCGGCTGTCACGCCGGCTGTCGCAGGCAGGGCTCCGTCCTCTGGCGGATCGACGACTCTGCAGAACCTACTTGCTAACTCTAACATGCTGCTCTTACTGACTATGTCCGTGTTCTTCATCTCATGAACAACTCGCTGACAATGATCTAACTTATAGTAGCTCTGTAAATTGTATGTGCCTC-GTATATGCCTATATGGTGTCTTTTTGTTGCTTAGAGAGCTCAGTAAATCAGCAGCTGCATGCTTCTGGGTGCCGTGCCGATAAGTCGTTTCCTGCGTGCACTGCGTGCAGCTGTATGTAAGTATATGTGTCGTGCATCCATGTGCATTGGAGCATGCGTATGAGCTGATCACCATGGCACATACATGGTGATCAAAATGAGCTGATCGTCTTTGTCTCCGTCTACTGTACACAAAATGAGCGTATCCCTGTAGTGATAACGCTGATGGGCGAAGAATCCCCTTTTGCGAGAGCTGCAGTGCAGCGTGCAGCCTTGCAGCAGGCGGTTTCTTGCGGCCCTGGTTTTGGCCTACTGCAACACACCACCCCGGCACAGAACCACCGTGCCACATCCACTGTACACACCTCCCCCTTCCTCTCCGTGCCTCTCTCCACACCACCACACCCCTCTCCTGTCCCTTCGCACCGCGCATTCGCCATTGCCATTGCCATTGCCTCCTTCACCATCGAGCCCCTCATCGGTCTCTTTGATTTGGTGTGTTATTAGCTCTCTGCTCTCTCCATGGGGGGAAGCATAAAGCGGCTGCTTAGCATGTTGTTGAGCGCGGTCAGTGGTGGGCAGAGGGACAAGGGGAAGAGGATGCAGCGGCGGCGGCAGCAGCAGCAGCAGCTACAGATCACAGTGGAGCTCAGGGTCAGGATGGACTGCGAGCGCTGCGAGCGTCAGGTCAGGAGAGCCCTCGCCGGCATGAGAGGTTAGTCCTCCGTCCATCCGTCCGTCCGGTTGGTCGTCTACCTGCTGGCCCTACGCATACTATGCCCCCCATTGTTTTCTCTGCTCGCTAGCATTGTGCCCAGGGCCTTGCTTTTCCATGTCCCTCGGCTCCTCCTGCGTAATGACCATCGTTGTCATGTCTGCTTAAGCTTTTCCCAGCACACTTTCTGCGAACAAATGCATCATCAATACTGTCAGACGAGCAGGTTGCGTTGCACCTTTCTTTTCAGCAATTCTTGGCCCCCAAACACGAATCCGTTGCAAATGCATAATAACACAACAATCCTAGTTCTTGATTATGGAGAGGGCATTGCATTTACAAGGTCATTTGTGAAGCTGCAGGGGTGCAGCATGTGGAGGTGAGCAGGAGGCAGCAGAAGGTGACCGTCACTGGCAGCGTGGACCCACACGAGGTCCTGCGCAGGGTCCAGTCCACGGGGAAGAAGGCCGAACTATGGCCCCAGTACCCTACCTACGGCAGCGCCGCCGCCGCCGCCGCCGCCGTGGTCCACTGCGGCCTCGGACCACCGCACGACAGGTGGGCACCCGCTTGCCACCCGAGGAACATGGACGCCGCCATGGGCGCCGAGCACATCGCCAACTTGTTCAGCGATGACAACCCCAACGCCTGCTCGCTCATGTGACGCCTACACCACCTACTGTCCGTCAGCATTGTGCTCCATCATACAGTTGGGTTCACTTCACTCTAGTTTGTTACTACTCTTTATTAGATAGTAGTAGGAGATCACCAGGCTGTGCTTATTTGAGGTCTAGATTAGCTTCCAGTAGTGTGTGCGGCAGTAAGCTAGCGATATGGGCCAAACTTTAAGAGGTTTTAATTACTACTTGTATGGTGCTACAGAATGGGCCAAAGTTTAGATGAAAACTTCCTCTGAA] [+] EMBL AK070999 [TCGCACCCCGCAAAACCTAGCCCCAGGTCCTCTCCTCCCCTCCGCCTTGCCGCATTACCCCCAGATCCACCGCCTCCGGCCCAGATCCACCCATGCGCCTCCCGGTGCTACTCCCGCTGCTGCTGCTGCTGCTCGCCGCGGCAGCGGCGGTGGCGGCGGCGGAAGCGGCGACGCTTTCGGCGAGGATGGTGCACCGGCTGTCCGACGAGGCTCGGCTCGCGGCGGGCGCGCGTGGGGGGCGGCGCTGGCCCCGTCGCGGGAGCGGGGATTACTTCCGCGCGCTGGTGCGGAGCGACCTCCAGCGGCAGAAGCGGCGGGTCGGCGGCAAGTACCAGCTCCTCTCCCTCTCCCAGGGCGGCAGTATCTTCCCCTCCGGCAACGACTTGGGCTGGTTATACTACACTTGGGTGGACGTTGGGACGCCAAATACTTCCTTCCTGGTCGCATTGGATACTGGAAGTGACTTGTTTTGGGTGCCTTGTGATTGTATCCAATGTGCGCCATTGTCCAGCTACCATGGAAGTTTGGATAGAAATCTTGGGATTTACAAGCCATCTGAATCAACTACAAGTCGGCATCTGCCCTGTAGCCATGAGCTTTGCTCACCGGCTTCAGGTTGCACAAACCCGAAGCAGCCTTGTCCATACAATATTGACTACTTTTCAGAAAATACAACCAGCTCCGGTTTGCTAATTGAGGATATATTACACTTGGATTCTAGGGAGGGCCATGCACCTGTGAATGCTTCTGTCATTATAGGCTGTGGTAAAAAGCAGAGTGGTAGCTATTTGGAAGGTATTGCACCAGATGGACTTCTTGGTCTTGGAATGGCAGATATCTCAGTACCTAGTTTCCTTGCAAGAGCTGGATTAGTACGAAATTCCTTTTCAATGTGTTTCAAGAAAGATGATTCTGGGAGAATTTTCTTTGGTGATCAAGGAGTACCTACCCAACAGTCTACACCATTTGTCCCGATGAATGGCAAGCTTCAGACTTATGCTGTTAATGTTGACAAATATTGTATTGGACATAAGTGTACGGAGGGAGCTGGCTTCCAGGCATTAGTAGACACTGGAACATCCTTCACCAGTCTTCCCCTCGATGCCTACAAGAGTATCACTATGGAGTTCGACAAACAAATCAATGCATCAAGAGCATCTTCTGATGATTATTCTTTCGAATATTGCTACAGCACCGGTCCTCTTGAGATGCCTGATGTTCCAACTATAACTCTGACTTTTGCTGAGAACAAGAGTTTCCAGGCTGTTAATCCTATACTTCCATTTAATGACAGACAGGGAGAATTTGCTGTCTTTTGCTTAGCAGTACTACCATCACCTGAACCTGTTGGGATTATTGGGCAGAATTTCATGGTTGGCTATCACGTAGTTTTTGACAGAGAAAATATGAAGCTGGGCTGGTACCGCTCTGAATGCCATGATCTTGACAACAGCACGACGGTGTCCTTAGGTCCATCACAGCATAACAGTCCAGAGGACCCCCTACCGTCAAACGAGCAGCAGACCTCTCCGGCTGTCACGCCGGCTGTCGCAGGCAGGGCTCCGTCCTCTGGCGGATCGACGACTCTGCAGAACCTACTTGCTAACTCTAACATGCTGCTCTTACTGACTATGTCCGTGTTCTTCATCTCATGAACAACTCGCTGACAATGATCTAACTTATAGTAGCTCTGTAAATTGTATGTGCCTC GTATATGCCTATATGGTGTCTTTTTGTTGCTTAGAGAGCTCAGTAAATCAGCAGCTGCATGCTTCTGGGTGCCGTGCCGATAAGTCGTTTCCTGCGTGCACTGCGTGCAGCTGTATGTAAGTAT ] [+] EMBL CB648514 [ CGGTTTGCTAATTGAGGATATGTTACACTTGGATTCTAGGGAGGGCCATGCACCTGTGAATGCTTCTGTCATTATAGGCTGTGGTAAAAAGCAGAGTGGTAGCTATTTGGAAGGTATTGCACCAGATGGACTTCTTGGTCTTGGAATGGCAGATATCTCAGTACCTAGTTTCCTTGCAAGAGCTGGATTAGTACGAAATTCCTTTTCAATGTGTTTCAAGAAAGATGATTCTGGGAGAATTTTCTTTGGTGATCAAGGAGTACCTACCCAACAGTCTACACCATTTGTCCCGATGAATGGCAAGCTTCAGACTTATGCTGTTAATGTTGACAAATATTGTATTGGACATAAGTGTACGGAGGGAGCTGGCTTCCAGGCATTAGTAGACACTGGAACATCCTTCACCAGTCTTCCCCTCGATGCCTACAAGAGTATCACTATGGAGTTCGACAAACAAATCAATGCATCAAGAGCATCTTCTGATGATTATTCTTTCGAATATTGCTACAGCACCGGTCCTCTTGAGATGCCTGATGTTCCAACTATAACTCTGACTTTTGCTGAGAACAAGAGTTTCCAGGCTGTTAATCCTATACTTCCATTTAATGACAGACAGGGAGAATTTGCTGTCTTTTGCTTAGCAGTACTACCATCACCTGAACCTGTTGGGATTATTGGGCAGAATTTCATGGTTGGCTATCACGTAGTTTTTGACAGAGACAATATGAAGCTGGGCTGGTACCGCTCTGAATGCCATGATC ] [-] EMBL CB648515 [ GTTAATGTTGACAAATATTGTATTGGACATAAGTGTACGGAGGGAGCTGGCTTCCAGGCATTAGTAGACACTGGAACATCCTTCACCAGTCTTCCCCTCGATGCCTACAAGAGTATCACTATGGAGTTCGACAAACAAATCAATGCATCAAGAGCATCTTCTGATGATTATTCTTTCGAATATTGCTACAGCACCGGTCCTCTTGAGATGCCTGATGTTCCAACTATAACTCTGACTTTTGCTGAGAACAAGAGTTTCCAGGCTGTTAATCCTATACTTCCATTTAATGACAGACAGGGAGAATTTGCTGTCTTTTGCTTAGCAGTACTACCATCACCTGAACCTGTTGGGATTATTGGGCAGAATTTCATGGTTGGCTATCACGTAGTTTTTGACAGAGAAAATATGAAGCTGGGCTGGTACCGCTCTGAATGCCATGATCTTGACAACAGCACGACGGTGTCCTTAGGTCCATCACAGCATAACAGTCCAGAGGACCCCCTACCGTCAAACGAGCAGCAGACCTCTCCGGCTGTCACGCCGGCTGTCGCAGGCAGGGCTCCGTCCTCTGGCGGATCGACGACTCTGCAGAACCTACTTGCTAACTCTAACATGCTGCTCTTACTGACTATGTCCGTGTTCTTCATCTCATGAACAACTCGCTGACAATGATCTAACTTATAGTAGCTCTGTAAATTGTATGTGCCTC GTATATGCCTATATGGTGTCTTTTTGTTGCTTAGA ] [+] EMBL AU166458 [ ACCATCACCTGAACCTGTTGGGATTATTGGGCAGAATTTCATGGTTGGCTATCACGTAGTTTTTGACAGAGAAAATATGAAGCTGGGCTGGTACCGCTCTGAATGCCATGATCTTGACAACAGCACGACGGTGTCCTTAGGTCCATCACAGCATAACAGTCCAGAGGACCCCCTACCGTCAAACGAGCAGCAGACCTCTCCGGCTGTCACGCCGGCTGTCGCAGGCAGGGCTCCGTCCTCTGGCGGATCGACGACTCTGCAGAACCTACTTGCTAACTCTAACATGCTGCTCTTACTGACTATGTCCGTGTTCTTCATCTCATGAACAACTCGCTGACAATGATCTAACTTATAGTAGCTCTGTAAATTGTATGTGCCTCGGTATATGCCTATATGGTGTCTTTTTGTTGCTTAa ] [+] EMBL AK120012 [ CTCGCTGACAATGATCTAACTTATAGTAGCTCTGTAAATTGTATGTGCCTC GTATATGCCTATATGGTGTCTTTTTGTTGCTTAGAGAGCTCAGTAAATCAGCAGCTGCATGCTTCTGGGTGCCGTGCCGATAAGTCGTTTCCTGCGTGCACTGCGTGCAGCTGTATGTAAGTATATGTGTCGTGCATCCATGTGCATTGGAGCATGCGTATGAGCTGATCACCATGGCACATACATGGTGATCAAAATGAGCTGATCGTCTTTGTCTCCGTCTACTGTACACAAAATGAGCGTATCCCTGTAGTGATAACGCTGATGGGCGAAGAATCCCCTTTTGCGAGAGCTGCAGTGCAGCGTGCAGCCTTGCAGCAGGCGGTTTCTTGCGGCCCTGGTTTTGGCCTACTGCAACACACCACCCCGGCACAGAACCACCGTGCCACATCCACTGTACACACCTCCCCCTTCCTCTCCGTGCCTCTCTCCACACCACCACACCCCTCTCCTGTCCCTTCGCACCGCGCATTCGCCATTGCCATTGCCATTGCCTCCTTCACCATCGAGCCCCTCATCGGTCTCTTTGATTTGGTGTGTTATTAGCTCTCTGCTCTCTCCATGGGGGGAAGCATAAAGCGGCTGCTTAGCATGTTGTTGAGCGCGGTCAGTGGTGGGCAGAGGGACAAGGGGAAGAGGATGCAGCGGCGGCGGCAGCAGCAGCAGCAGCTACAGATCACAGTGGAGCTCAGGGTCAGGATGGACTGCGAGCGCTGCGAGCGTCAGGTCAGGAGAGCCCTCGCCGGCATGAGAGGTTAGTCCTCCGTCCATCCGTCCGTCCGGTTGGTCGTCTACCTGCTGGCCCTACGCATACTATGCCCCCCATTGTTTTCTCTGCTCGCTAGCATTGTGCCCAGGGCCTTGCTTTTCCATGTCCCTCGGCTCCTCCTGCGTAATGACCATCGTTGTCATGTCTGCTTAAGCTTTTCCCAGCACACTTTCTGCGAACAAATGCATCATCAATACTGTCAGACGAGCAGGTTGCGTTGCACCTTTCTTTTCAGCAATTCTTGGCCCCCAAACACGAATCCGTTGCAAATGCATAATAACACAACAATCCTAGTTCTTGATTATGGAGAGGGCATTGCATTTACAAGGTCATTTGTGAAGCTGCAGGGGTGCAGCATGTGGAGGTGAGCAGGAGGCAGCAGAAGGTGACCGTCACTGGCAGCGTGGACCCACACGAGGTCCTGCGCAGGGTCCAGTCCACGGGGAAGAAGGCCGAACTATGGCCCCAGTACCCTACCTACGGCAGCGCCGCCGCCGCCGCCGCCGCCGTGGTCCACTGCGGCCTCGGACCACCGCACGACAGGTGGGCACCCGCTTGCCACCCGAGGAACATGGACGCCGCCATGGGCGCCGAGCACATCGCCAACTTGTTCAGCGATGACAACCCCAACGCCTGCTCGCTCATGTGACGCCTACACCACCTACTGTCCGTCAGCATTGTGCTCCATCATACAGTTGGGTTCACTTCACTCTAGTTTGTTACTACTCTTTATTAGATAGTAGTAGGAGATCACCAGGCTGTGCTTATTTGAGGTCTAGATTAGCTTCCAGTAGTGTGTGCGGCAGTAAGCTAGCGATATGGGCCAAACTTTAAGAGGTTTTAATTACTACTTGTATGGTGCTACAGAATGGGCCAAAGTTTAGATGAAAACTTCCTCTGAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||