cluster # 8084

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Oryza sativa
cluster # 8084 cluster # 8084 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8084#0 length = 2939 sequences # 5
consensusID : consensus_8084#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2939
fasta sequence
                              [TCTTCATGCTTTGCTTGGTCTGGTCCTATCAGCAGCTGAAGGCATTCTTTCTGAACTTTTAGAAGCTCATAGAACTACATCTGAAATGACTCATGCACTTGGGGATCTTTTGATTCATCTATTTGCGGAAGGCTTTGGTTCCACAGATGATACAACTGAAGATGCTTCAGATGGACCACAGCAGGATGCAACTGGAACTGGCATGGGTGAGGGTGAAGGCAAAGAGAGTGCAAGTTCTAAAATAGATGATATATCCCAACTTGAGGGGACAGCTAATGAAATGGATGCTCTACGTAAGCCAGACCAAGCTCCTAAGAATGATGATGATGCAGTTGAAATGCAAGACGATTTTAATGCAGAACTGTCTGATGTTTCTGAGGACCCTGAAGGCAATGATTCAGGCGATGAGGATGATGACACGAACTTGGAGAATCAGATGGGTGATACTGGTGATGCAAGTGAAATGGTCGGCAAGAAATCTTGGGATAAGGATGAAGATGATGATCCTAACAGATCCACTGAGAAGTATGAGTCGGGTTCATCAGCCCAAGAGACACAGAAGAATGATAGGGAACTGAGAGCAAAGGACGAAGGTGCTCTTGAAGAAGATCCCATGGAGACAGATTGTGATGAGCAAGGCAAGAATAATAATTTGGAGGATGATCCTAGTACTTGTGAGGATGTTGATCAGGATACGAATGACTTAATGGACAAAGCTGATGCCTATGATGATCGAACAGCACCTGAACTCCCTGAACCAAAGGATGATTCTGAGGATGTGGATATGGATGGGACAGAACATATTGATGAAATGGATGCTGATGGTGAAGAACTCAGTCCAGAAGAGGAAAAGCTAGCAGCAGATGGGTGTTTAGATGCTTCAGACGATGTGGAGGATGTAGATGCAGCTCAACATGGTGACAATGAGATTGATGGTGAGCAGGAGCATGCTGAAGATGGACAGATGGAGACAAATAACATGGAGAAAGAACTTCATAATATTGAGTCACTTGAGCATCCTTCACAAGGCATACAACCAAATAATGCCGAAATGGACTATAACAGAGAATCTGAATCAAACTTGGCTAACAGCACTGATATGAACAGTGCTGCTGCTCCTTCTNGTT-ATTTTTCAAGCAATGAAGTCCCTAGTCTGGATATATCTATGCCCAACTCTGGGGATGGCTCTAGGTTATTGTCTAACTCTAAGCCAGAGTTGCAGACTGATACTCCACCATCGCAGATCAAACAGACAAATCCTTTTAGGAGCATTGGAGATGCAATGGCGGACTGGAAAGAACGGGCCAAAGTCTCAGCTGATACGCAGGATCATCAACCAGAAGCTGAACACCATATTGATGATGAAAGTGCTACCGAATTTCGTTATGTGCCGGACAGTGAGCAGAGCACCTCTCAGGCACTGGGTAATGCAACAGCTGATCAAATCAACGATGACCTGCAAGTCAAACAGTCTTCCATGGAGGATGAAAACCGTGTGCAAAAAGAGGAACACAATACTGACAGGGCACCTGGAGATGATCATAATCTTGAAGTGCCACATCTGCAAGCTTCACAATCACGTACCAACAAATCTGAAAATGCCAACAACCTTGAGCATAGAGAGATTCAAACTGATACATATGTTCAGGATTCAGTTCAAGGTGAAACAGACGAGACTTTTGGAGATTTTGTTTCGTTCAAACAACCTCCAGCAGATGAAAAAACAGTTATGCGGGATGATTTAGCCAATGACAGGGAGTTGTCTACTCCGATGGAAATCAACATCACTGATGTAGATATGAAAGGTCCTATTGTTGACTGGAAAAGTGTTGAGCTCACAACTATGAAGTTGTCCCAAGAACTTGCTGAGCAATTGCGCCTTGTCATGGAACCAACTCTTGCAAGTAAGCTTCAAGGAGATTACAGAACTGGAAAGAGAATAAACATGAAAAAGGTTATTCCATATATTGCAAGTCATTTCCGCAGGGATAAGATATGGTTGCGCCGAACTAAACCTAATAAACGTAATTACCAAGTGGTTATTGCTGTGGACGACTCACGGAGTATGTCCGAGGGCAAGTGTGGAAAAGTGGCTATTGAAGCATTAGTTACAGTCTGCCGGGCCATGTCACAACTTGAGGTTGGACAGTTTGCAGTTGCAAGTTTCGGGAAAAAGGGAAATGTCAAAGTGCTACATGATTTCGATCAGGTCTTCAATGGAGAAGCAGGAACGAATATGATTTCTAGTTTGTCCTTTGAGCAAGACAACAAACTTGAGGATGAACCAGTTGCTGATCTCTTGATGCATCTGAACACAATGCTTGATACTGCCGTGGCACGGTCACGTACACCGTCAGGGCAAAATCCACTTCAGCAACTCGTACTAATAATATCTGACGGGAAGTTCCACGAAAAGGAAAATTTGAAGCGTTGCGTCAGGAATGTCCTTAACAGAAAGAGGATGATCGCATATGTGCTCCTAGATGGTCACGAGGAATCTATCATGGATTCACTGGAAGTATCCTATCAAGGTACCAAACTAACCATGGGGAAATATATGGACTCCTTTCCATTCCCTTACTATGTCATGCTGAAGAATATTGAAGCACTTCCTCGTACATTGGCTGACTTGCTTAGACAGTGGTTTGAGCTCATGCAGAGCGCTAATGAATGATCTTTTGGATGCTCATCAAAGTAACCGGAGGAAGAATGCCCTCGCGCCCATCACTGTAATTTGTGTATAGAATACTACCAAAATTTTGAGTCCCCTAGGCTTCTAGCTGCTTACACACTTTGGGTTAACAACTGTTCCAAGGCCTGAGCTGTGTACAAAATATACCACATTTCGTTGTAAACTGCATTTGAGAAATGCAAGCAATTTTGTAGCTACTACTCATGACTCATGAGCGTCTGGAAAGAAATTTCCTCTTCCAAAAAAA]

[+] EMBL CB640439             [TCTTCATGCTTTGCTTGGTCTGGTCCTATCAGCAGCTGAAGGCATTCTTTCTGAACTTTTAGAAGCTCATAGAACTACATCTGAAATGACTCATGCACTTGGGGATCTTTTGATTCATCTATTTGCGGAAGGCTTTGGTTCCACAGATGATACAACTGAAGATGCTTCAGATGGACCACAGCAGGATGCAACTGGAACTGGCATGGGTGAGGGTGAAGGCAAAGAGAGTGCAAGTTCTAAAATAGATGATATATCCCAACTTGAGGGGACAGCTAATGAAATGGATGCTCTACGTAAGCCAGACCAAGCTCCTAAGAATGATGATGATGCAGTTGAAATGCAAGACGATTTTAATGCAGAACTGTCTGATGTTTCTGAGGACCCTGAAGGCAATGATTCAGGCGATGAGGATGATGACACGAACTTGGAGAATCAGATGGGTGATACTGGTGATGCAAGTGAAATGGTCGGCAAGAAATCTTGGGATAAGGATGAAGATGATGATCCTAACAGATCCACTGAGAAGTATGAGTCGGGTTCATCAGCCCAAGAGACACAGAAGAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB665878             [                                                                                                                                                                                                                                                                                                                               GATGATGATGCAGTTGAAATGCAAGACGATTTTAATGCAGAACTGTCTGATGTTTCTGAGGACCCTGAAGGCAATGATTCAGGCGATGAGGATGATGACACGAACTTGGAGAATCAGATGGGTGATACTGGTGATGCAAGTGAAATGGTCGGCAAGAAATCTTGGGATAAGGATGAAGATGATGATCCTAACAGATCCACTGAGAAGTATGAGTCGGGTTCATCAGCCAAGGAGACACAGAAGAATGATAGGGAACTGAGAGCAAAGGACGAAGGTGCTCTTGAAGAAGATCCCATGGAGACAGATTGTGATGAGCAAGGCAAGAATAATAATTTGGAGGATGATCCTAGTACTTGTGAGGATGTTGATCAGGATACGAATGACTTAATGGACAAAGCTGATGCCTATGATGATCGAACAGCACCTGAACTCCCTGAACCAAAGGATGATTCTGAGGATGTGGATATGGATGGGACAGAACATATTGATGAAATGGATGCTGATGGTGAAGAACTCAGTCCAGAAGAGGAAAAGCTAGCAGCAGATGGGTGTTTAGATGCTTCAGACGATGTGGAGGATGTAGATGCAGCTCAACATGGTGACAATGAGATTGATGGTGAGCAGGAGCATGCTGAAGATGGACAGATGGAGACAAATAACATGGAGAAAGAACTTCATAATATTGAGTCACTTGAGCATCCTTCACAAGGCATACAACCAAATAATGCCGAAATGGACTATAACAGAGAATCTGAATCAAACTTGGCTAACAGCACTGATATGAACAGTGCTGCTGCTCCTTCTNGTT ATTTTTCAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK064571             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCGAAATGGACTATAACAGAGAATCTGAATCAAACTTGGCTAACAGCACTGATATGAACAGTGCTGCTGCTCCTTCT GTTAATTTTTCAAGCAATGAAGTCCCTAGTCTGGATATATCTATGCCCAACTCTGGGGATGGCTCTAGGTTATTGTCTAACTCTAAGCCAGAGTTGCAGACTGATACTCCACCATCGCAGATCAAACAGACAAATCCTTTTAGGAGCATTGGAGATGCAATGGCGGACTGGAAAGAACGGGCCAAAGTCTCAGCTGATACGCAGGATCATCAACCAGAAGCTGAACACCATATTGATGATGAAAGTGCTACCGAATTTCGTTATGTGCCGGACAGTGAGCAGAGCACCTCTCAGGCACTGGGTAATGCAACAGCTGATCAAATCAACGATGACCTGCAAGTCAAACAGTCTTCCATGGAGGATGAAAACCGTGTGCAAAAAGAGGAACACAATACTGACAGGGCACCTGGAGATGATCATAATCTTGAAGTGCCACATCTGCAAGCTTCACAATCACGTACCAACAAATCTGAAAATGCCAACAACCTTGAGCATAGAGAGATTCAAACTGATACATATGTTCAGGATTCAGTTCAAGGTGAAACAGACGAGACTTTTGGAGATTTTGTTTCGTTCAAACAACCTCCAGCAGATGAAAAAACAGTTATGCGGGATGATTTAGCCAATGACAGGGAGTTGTCTACTCCGATGGAAATCAACATCACTGATGTAGATATGAAAGGTCCTATTGTTGACTGGAAAAGTGTTGAGCTCACAACTATGAAGTTGTCCCAAGAACTTGCTGAGCAATTGCGCCTTGTCATGGAACCAACTCTTGCAAGTAAGCTTCAAGGAGATTACAGAACTGGAAAGAGAATAAACATGAAAAAGGTTATTCCATATATTGCAAGTCATTTCCGCAGGGATAAGATATGGTTGCGCCGAACTAAACCTAATAAACGTAATTACCAAGTGGTTATTGCTGTGGACGACTCACGGAGTATGTCCGAGGGCAAGTGTGGAAAAGTGGCTATTGAAGCATTAGTTACAGTCTGCCGGGCCATGTCACAACTTGAGGTTGGACAGTTTGCAGTTGCAAGTTTCGGGAAAAAGGGAAATGTCAAAGTGCTACATGATTTCGATCAGGTCTTCAATGGAGAAGCAGGAACGAATATGATTTCTAGTTTGTCCTTTGAGCAAGACAACAAACTTGAGGATGAACCAGTTGCTGATCTCTTGATGCATCTGAACACAATGCTTGATACTGCCGTGGCACGGTCACGTACACCGTCAGGGCAAAATCCACTTCAGCAACTCGTACTAATAATATCTGACGGGAAGTTCCACGAAAAGGAAAATTTGAAGCGTTGCGTCAGGAATGTCCTTAACAGAAAGAGGATGATCGCATATGTGCTCCTAGATGGTCACGAGGAATCTATCATGGATTCACTGGAAGTATCCTATCAAGGTACCAAACTAACCATGGGGAAATATATGGACTCCTTTCCATTCCCTTACTATGTCATGCTGAAGAATATTGAAGCACTTCCTCGTACATTGGCTGACTTGCTTAGACAGTGGTTTGAGCTCATGCAGAGCGCTAATGAATGATCTTTTGGATGCTCATCAAAGTAACCGGAGGAAGAATGCCCTCGCGCCCATCACTGTAATTTGTGTATAGAATACTACCAAAATTTTGAGTCCCCTAGGCTTCTAGCTGCTTACACACTTTGGGTTAACAACTGTTCCAAGGCCTGAGCTGTGTACAAAATATACCACATTTCGTTGTAAACTGCATTTGAGAAATGCAAGCAA                                                             ]
[-] EMBL CB665879             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAACTTGAGGTTGGACAGTTTGCAGTTGCAAGTTTCGGGAAAAAGGGAAATGTCAAAGTGCTACATGATTTCGATCAGGTCTTCAATGGAGAAGCAGGAACGAATATGATTTCTAGTTTGTCCTTTGAGCAAGACAACAAACTTGAGGATGAACCAGTTGCTGATCTCTTGATGCATCTGAACACAATGCTTGATACTGCCGTGGCACGGTCACGTACACCGTCAGGGCAAAATCCACTTCAGCAACTCGTACTAATAATATCTGACGGGAAGTTCCACGAAAAGGAAAATTTGAAGCGTTGCGTCAGGAATGTCCTTAACAGAAAGAGGATGATCGCATATGTGCTCCTAGATGGTCACGAGGAATCTATCATGGATTCACTGGAAGTATCCTATCAAGGTACCAAACTAACCATGGGGAAATATATGGACTCCTTTCCATTCCCTTACTATGTCATGCTGAAGAATATTGAAGCACTTCCTCGTACATTGGCTGACTTGCTTAGACAGTGGTTTGAGCTCATGCAGAGCGCTAATGAATGATCTTTTGGATGCTCATCAAAGTAACCGGAGGAAGAATGCCCTCGCGCCCATCACTGTAATTTGTGTATAGAATACTACCAAAATTTTGAGTCCCCTAGGCTTCTAGCTGCTTACACACTTTGGGTTAACAACTGTTCCAAGGCCTGAGCTGTGTACAAAATATACCACATTTCGTTGTAAACTGCATTTGAGAAATGCAAGCAATTTTGTAGCTACTACTCATGACTCATGAGCGTCTGGAAAGAAAT                 ]
[+] EMBL BI812329             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TAACAGAAAGAGGATGATCGCATATGTGCTCCTAGATGGTCACGAGGAATCTATCATGGATTCACTGGAAGTATCCTATCAAGGTACC AACTAACCATGGGGAAATATATGGACTCCTTTCCATTCCCTTACTATGTCATGCTGAAGAATATTGAAGCACTTCCTCGTACATTGGCTGACTTGCTTAGACAGTGGTTTGAGCTCATGCAGAGCGCTAATGAATGATCTTTTGGATGCTCATCAAAGTAACCGGAGGAAGAATGCCCTCGCGCCCATCACTGTAATTTGTGTATAGAATACTACCCAAATTTTGAGTCCCCTAGGCTTCTAGCTGCTTACACACTTTGGGTTAACAACTGTTCCAAGGCCTGAGCTGTGTACAAAATATACCACATTTCGTTGTAAACTGCATTTGAGAAATGCAAGC ATTTTGTAGCTACTACTCATGACTCATGAGCGTCTGGAAAGAAATTTCCTCTTCCAAAAAAA]




>consensus_8084#0
TCTTCATGCTTTGCTTGGTCTGGTCCTATCAGCAGCTGAAGGCATTCTTTCTGAACTTTT
AGAAGCTCATAGAACTACATCTGAAATGACTCATGCACTTGGGGATCTTTTGATTCATCT
ATTTGCGGAAGGCTTTGGTTCCACAGATGATACAACTGAAGATGCTTCAGATGGACCACA
GCAGGATGCAACTGGAACTGGCATGGGTGAGGGTGAAGGCAAAGAGAGTGCAAGTTCTAA
AATAGATGATATATCCCAACTTGAGGGGACAGCTAATGAAATGGATGCTCTACGTAAGCC
AGACCAAGCTCCTAAGAATGATGATGATGCAGTTGAAATGCAAGACGATTTTAATGCAGA
ACTGTCTGATGTTTCTGAGGACCCTGAAGGCAATGATTCAGGCGATGAGGATGATGACAC
GAACTTGGAGAATCAGATGGGTGATACTGGTGATGCAAGTGAAATGGTCGGCAAGAAATC
TTGGGATAAGGATGAAGATGATGATCCTAACAGATCCACTGAGAAGTATGAGTCGGGTTC
ATCAGCCCAAGAGACACAGAAGAATGATAGGGAACTGAGAGCAAAGGACGAAGGTGCTCT
TGAAGAAGATCCCATGGAGACAGATTGTGATGAGCAAGGCAAGAATAATAATTTGGAGGA
TGATCCTAGTACTTGTGAGGATGTTGATCAGGATACGAATGACTTAATGGACAAAGCTGA
TGCCTATGATGATCGAACAGCACCTGAACTCCCTGAACCAAAGGATGATTCTGAGGATGT
GGATATGGATGGGACAGAACATATTGATGAAATGGATGCTGATGGTGAAGAACTCAGTCC
AGAAGAGGAAAAGCTAGCAGCAGATGGGTGTTTAGATGCTTCAGACGATGTGGAGGATGT
AGATGCAGCTCAACATGGTGACAATGAGATTGATGGTGAGCAGGAGCATGCTGAAGATGG
ACAGATGGAGACAAATAACATGGAGAAAGAACTTCATAATATTGAGTCACTTGAGCATCC
TTCACAAGGCATACAACCAAATAATGCCGAAATGGACTATAACAGAGAATCTGAATCAAA
CTTGGCTAACAGCACTGATATGAACAGTGCTGCTGCTCCTTCTNGTTATTTTTCAAGCAA
TGAAGTCCCTAGTCTGGATATATCTATGCCCAACTCTGGGGATGGCTCTAGGTTATTGTC
TAACTCTAAGCCAGAGTTGCAGACTGATACTCCACCATCGCAGATCAAACAGACAAATCC
TTTTAGGAGCATTGGAGATGCAATGGCGGACTGGAAAGAACGGGCCAAAGTCTCAGCTGA
TACGCAGGATCATCAACCAGAAGCTGAACACCATATTGATGATGAAAGTGCTACCGAATT
TCGTTATGTGCCGGACAGTGAGCAGAGCACCTCTCAGGCACTGGGTAATGCAACAGCTGA
TCAAATCAACGATGACCTGCAAGTCAAACAGTCTTCCATGGAGGATGAAAACCGTGTGCA
AAAAGAGGAACACAATACTGACAGGGCACCTGGAGATGATCATAATCTTGAAGTGCCACA
TCTGCAAGCTTCACAATCACGTACCAACAAATCTGAAAATGCCAACAACCTTGAGCATAG
AGAGATTCAAACTGATACATATGTTCAGGATTCAGTTCAAGGTGAAACAGACGAGACTTT
TGGAGATTTTGTTTCGTTCAAACAACCTCCAGCAGATGAAAAAACAGTTATGCGGGATGA
TTTAGCCAATGACAGGGAGTTGTCTACTCCGATGGAAATCAACATCACTGATGTAGATAT
GAAAGGTCCTATTGTTGACTGGAAAAGTGTTGAGCTCACAACTATGAAGTTGTCCCAAGA
ACTTGCTGAGCAATTGCGCCTTGTCATGGAACCAACTCTTGCAAGTAAGCTTCAAGGAGA
TTACAGAACTGGAAAGAGAATAAACATGAAAAAGGTTATTCCATATATTGCAAGTCATTT
CCGCAGGGATAAGATATGGTTGCGCCGAACTAAACCTAATAAACGTAATTACCAAGTGGT
TATTGCTGTGGACGACTCACGGAGTATGTCCGAGGGCAAGTGTGGAAAAGTGGCTATTGA
AGCATTAGTTACAGTCTGCCGGGCCATGTCACAACTTGAGGTTGGACAGTTTGCAGTTGC
AAGTTTCGGGAAAAAGGGAAATGTCAAAGTGCTACATGATTTCGATCAGGTCTTCAATGG
AGAAGCAGGAACGAATATGATTTCTAGTTTGTCCTTTGAGCAAGACAACAAACTTGAGGA
TGAACCAGTTGCTGATCTCTTGATGCATCTGAACACAATGCTTGATACTGCCGTGGCACG
GTCACGTACACCGTCAGGGCAAAATCCACTTCAGCAACTCGTACTAATAATATCTGACGG
GAAGTTCCACGAAAAGGAAAATTTGAAGCGTTGCGTCAGGAATGTCCTTAACAGAAAGAG
GATGATCGCATATGTGCTCCTAGATGGTCACGAGGAATCTATCATGGATTCACTGGAAGT
ATCCTATCAAGGTACCAAACTAACCATGGGGAAATATATGGACTCCTTTCCATTCCCTTA
CTATGTCATGCTGAAGAATATTGAAGCACTTCCTCGTACATTGGCTGACTTGCTTAGACA
GTGGTTTGAGCTCATGCAGAGCGCTAATGAATGATCTTTTGGATGCTCATCAAAGTAACC
GGAGGAAGAATGCCCTCGCGCCCATCACTGTAATTTGTGTATAGAATACTACCAAAATTT
TGAGTCCCCTAGGCTTCTAGCTGCTTACACACTTTGGGTTAACAACTGTTCCAAGGCCTG
AGCTGTGTACAAAATATACCACATTTCGTTGTAAACTGCATTTGAGAAATGCAAGCAATT
TTGTAGCTACTACTCATGACTCATGAGCGTCTGGAAAGAAATTTCCTCTTCCAAAAAAA
clustalw multiple alignements is not computed in this case