These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8085#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1206 fasta sequence [TTTGATCCAGCAAACAAACTTGGTCAAGGGAGCTATGGAGCTGTGTTCAAGGCTATTCTTTTGGATGGAAAACAAGTTGCTGTGAAGAGGCTATTCCTAAATACAAGGGAGTGGGTTGATCAATTTTTCAACGAAGTTGAACTCATAAGTCAAGTTCGTCATAAGAATCTAGTTAAGCTGCTTGGTTGCAGCGTGAATGGTCCAGAGAGCCTGCTTGTTTATGAATACTACTTCAACAAGAGCCTCGATCTCTTCTTGTTTGATGCAAGTCGTAGCAGAAATTTAACCTGGAATTTGAGGGTTGATATCATTCAAGGCATAGCGGAGGGACTTTCTTACCTCCATGAGGAGTCAGAAACAAGGATTATCCACAGAGATATCAAAGCCAGTAATATTTTATTGGATGATAAGTTTAAG-CCCAAGATAACAGATTTTGGCCTTGCAAGAGCTTTTGGAGAGGATAGAACTCATCTCACCACGGGTGTTGCTGGAACACTAGGATACATGGCTCCTGAATATTTGGCACATGGCCATCTTACAGAGAAGGCTGATGTCTACAGCTATGGTATTCTGGTTCTTGAGCTTGTAACAGGACAAAGATGTAGCGGCTCAATTGGTTCACATGGAGGTCACTTCTTGTTAACAAAGGTATGGAACCACTACAAGAATAAAGCAGTAGAAATGATCGCTGACCGCAGCATCTACGAGGATACCATCAGGGATGAGGTCATGCATGTCGTGCAGATTGGGCTGTCATGCACCCAAGCAAACGCTGGCGACAGGCCTACAATGACGAAGGTTGTGGAGTTGCTGAGAAGCCACAGGCATGATGTGGAGATTATCTTGAGTGATCCTCCATTTTTGGATGTCGAGGCCTTTGAGGATATCAAACAAGGCGAACAGTCTCGGTTGCTGTCCGCACGTTCGGCTCATTCAGTATCAGGTTCATCTCGGTCCTATCTAAGTGGAAGATAAGCTAAGCTTC--TTTTTTTTTTTAAAAAAAATATCATAGGAATATATATCAAGACGGTCTACAGTTTTGTGTGATGTACATGTGAAAGTTGTCAATGTTGGTAGCAGAGATACATTCTTCAAAATGTA-TTTTTTTGTCATACCTGTACATAGTTATAAATGAATTTCTATGTTTTCGTTTTTTTTTTTAACGAACCGCACGAGACAGTGTGAGATTTTATAAAAAAAAAAAAA] [+] EMBL CF306504 [TTTGATCCAGCAAACAAACTTGGTCAAGGGAGCTATGGAGCTGTGTTCAAGGCTATTCTTTTGGATGGAAAACAAGTTGCTGTGAAGAGGCTATTCCTAAATACAAGGGAGTGGGTTGATCAATTTTTCAACGAAGTTGAACTCATAAGTCAAGTTCGTCATAAGAATCTAGTTAAGCTGCTTGGTTGCAGCGTGAATGGTCCAGAGAGCCTGCTTGTTTATGAATACTACTTCAACAAGAGCCTCGATCTCTTCTTGTTTGATGCAAGTCGTAGCAGAAATTTAACCTGGAATTTGAGGGTTGATATCATTCAAGGCATAGCGGAGGGACTTTCTTACCTCCATGAGGAGTCAGAAACAAGGATTATCCACAGAGATATCAAAGCCAGTAATATTTTATTGGATGATAAGTTTAAGCCCCAAGATAACAGATTTTGGCCTTGCAAGAGCTTTTGGAGAGGATAGAACTCATCTCACCACGGGTGTTGCTGGAACACTAGGATACATGGCTCCTGAA ] [+] EMBL AK110719 [ CGTAGCAGAAATTTAACCTGGAATTTGAGGGTTGATATCATTCAAGGCATAGCGGAGGGACTTTCTTACCTCCATGAGGAGTCAGAAACAAGGATTATCCACAGAGATATCAAAGCCAGTAATATTTTATTGGATGATAAGTTTAAG CCCAAGATAACAGATTTTGGCCTTGCAAGAGCTTTTGGAGAGGATAGAACTCATCTCACCACGGGTGTAGCTGGAACACTAGGATACATGGCTCCTGAATATTTGGCACATGGCCATCTTACAGAGAAGGCTGATGTCTACAGCTATGGTATTCTGGTTCTTGAGCTTGTAACAGGACAAAGATGTAGCGGCTCAATTGGTTCACATGGAGGTCACTTCTTGTTAACAAAGGTATGGAACCACTACAAGAACAAAGCAGTAGAAATGATCGCTGACCGCAGCATCTACGAGGATACCATCAGGGATGAGGTCATGCATGTCGTGCAGATTGGGCTGTCATGCACCCAAGCAAACGCTGGCGACAGGCCTACAATGACGAAGGTTGTGGAGTTGCTGAGAAGCCACAGGCATGATGTGGAGATTATCTTGAGTGATCCTCCATTTTTGGATGTCGAGGCCTTTGAGGATATCAAACAAGGCGAACAGTCTCGGTTGCTGTCCGCACGTTCGGCTCATTCAGTATCAGGTTCATCTCGGTCCTATCTAAGTGGAAGATAAGCTAAGCTTCTTTTTTTTTTTTTAAAAAAAATATCATAGGAATATATATCAAGACGGTCTACAGTTTTGTGTGATGTACATGTGAAAGTTGTCAATGTTGGTAGCAGAGA ] [-] EMBL CA763066 [ TGGCACATGGCCATCTTACAGAGAAGGCTGATGTCTACAGCTATGGTATTCTGGTTCTTGAGCTTGTAACAGGACAAAGATGTAGCGGCTCAATTGGTTCACATGGAGGTCACTTCTTGCTAACAAAGGTATGGAACCCCTNCAAGAATAAAGCAGTAGAAATGATCGCTGACCGCAGCATCTACGAGGATACCATCAGGGATGAGGTCATGCATGTCGTGCAGATTGGGCTGTCATGCACCCAAGCAAACGCTGGCGACAGGCCTACAATGACGAAGGTTGTGGAGTTGCTGAGAAGCCACAGGCATGATGTGGAGATTATCTTGAGTGATCCTCCATTTTTGGATGTCGAGGCCTTTGAGGATATCAAACAAGGCGAACAGTCTCGGTTGCTGTCCGCACGTTCGGCTCATTCAGTATCAGGTTCATCTCGGTCCTATCTAAGTGGAAGATAAGCTAAGCTTC TTTTTTTTTAAAAAAAAATATCATAGGAATATATATCAAGACGGTCTACAGTTTTGTGTGATGTACATGTGAAAGTTGTCAATGTTGGTAGCAGAGATACATTCTTCAAAATGTA TTTTTTTGTCATACCTGTACATAGTTATAAATGAATTTCTATGTTTTCGTTTTTTTTTTTAACGAACCGCACGAGACAGTGTGAGATTTTATAAAAAAAAAAAAA] [+] EMBL CA763941 [ ggggGAGAAGGCTGATGTCTACAGCTATGGTATTCTGGTTCTTGAGCTTGTAACAGGACAAAGATGTAGCGGCTCAATTGGTTCACATGGAGGTCACTTCTTGTTAACAAAGGTATGGAACCACTACAAGAATAAAGCAGTAGAAATGATCGCTGACCGCAGCATCTACGAGGATACCATCAGGGATGAGGTCATGCATGTCGTGCAGATTGGGCTGTCATGCACCCAAGCAAACGCTGGCGACAGGCCTACAATGACGAAGGTTGTGGAGTTGCTGAGAAGCCACAGGCATGATGTGGAGATTATCTTGAGTGATCCTCCATTTTTGGATGTCGAGGCCTTTGAGGATATCAAACAAGGCGAACAGTCTCGGTTGCTGTCCGCACGTTCGGCTCATTCAGTATCAGGTTCATCTCGGTCCTATCTAAGTGGAAGATAAGCTAAGCTTC TTTTTTTTTTAAAAAAAAATATCATAGGAATATATATCAAGACGGTCTACAGTTTTGTGTGATGTACATGTGAAAGTTGTCAATGTTGGTAGCAGAGATACATTCTTCAAAATGTA TTTTTTTGTCATACCTGTACATAGNTATAAATGAATTTCTATGGTTTCGGTTTT ] [-] EMBL CB637177 [ CGAGGATACCATCAGGGATGAGGTCATGCATGTCGTGCAGATTGGGCTGTCATGCACCCAAGCAAACGCTGGCGACAGGCCTACAATGACGAAGGTTGTGGAGTTGCTGAGAAGCCACAGGCATGATGTGGAGATTATCTTGAGTGATCCTCCATTTTTGGATGTCGAGGCCTTTGAGGATATCAAACAAGGCGAACAGTCTCGGTTGCTGTCCGCACGTTCGGCTCATTCAGTATCAGGTTCATCTCGGTCCTATCTAAGTGGAAGATAAGCTAAGCTTC TTTTTTTTTTTAAAAAAAATATCATAGGAATATATATCAAGACGGTCTACAGTTTTGTGTGATGTACATGTGAAAGTTGTCAATGTTGGTAGCAGAGATACATTTTTCAAAATGTATTTTTTTTGTCATACCTGTACATAGTTATAAATGAATTTATATGTTTTCG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||