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Oryza sativa
cluster # 8091 cluster # 8091       Sequences # 5       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8091#0 length = 2048 sequences # 1  
consensus_8091#1 length = 752 sequences # 1  
consensus_8091#2 length = 593 sequences # 2  
consensus_8091#3 length = 443 sequences # 1  

consensusID : consensus_8091#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2048
fasta sequence
                              [GGATGGTTTCGTACCTTCCCAGAATGAATTGTCAAGCACAAGTCTCGGAATATCTCAACATCTGGCCTGGTTGGATATCTGAAGCTAACATGCTGGAACTCAATATTGCCGTGCAGTGTTTCGACAGTTACCCCTGCATCCTCACTTGGGTCTATCCTAGATTTACGATCCACAATTGCAAATATCGAAGACACAGCTGATTTTGCTTTGGAAGAATCTGATGTAAGGGTACTTGATTGCGACACCCCAATCGCTGCCATAGCAAGAGCAAGAAAAACCTGCATTCAGATGGCAGAAAAATTGAGTTCTTCATTTCAAAAATATGTGAGCGATGTTAAAAGTTTATATATGAAGTAGCTGAAGTTTAAATTCTCCTACCACTGCCGGAGTACAGAATACTTACCCTGAAAACTTTAGGAAAAGTTGTCTTGTTTTCCTCAACAAGCCGAGCACCAGCATAAAAGCTAGCTGCATATACACCAAATAGCAAGAAAAATGAAACACCAAAGCCAATTCCACTTATAATCCCTGTTCTAATCCCTGTCCTTAGGGGGCCTTCACATTTCTTCTTGTACAAATCCATAACCTTTTCTTCTGCTGAGAAGGAGACTACGGTTCTTATACTGCTTACTGCATCATTTGCCACTTGACTTGCCTCCTCATACATCATCTGCATAAACAAGTAAAGAAGTCAGGTTTTGCGGAAGTAATAATCCAGCAAAACAAACATTTCAGTAGAGGACAAACCTTTGCATCTGCACTGAAACCCTGAATGAATTTCATCTGGATCCATCCATTTAGACCAATGAGTGGTATTAAAGCTAAGATGATGAGTGATAACTCCCAGTTTGATACAAAGGCAATGACTAAACCAGCAATCAAGGTTGTTGTGTTTTGTACAACTAATTGAAGTGCATCACCCACAAGCCCCCTAACTTTAGCTGCATCAGCTGATAGCCTTGCACCAATTGCTCCACTTGAGTTTTCTGGGTGATCAAACCATTCGATCTCCATATTTACCACCTTCTCAAATGTCATCAATCTTATCCTTTTGATCAACCTGCACCCAGCTATAGAGAAAAGGTACGAACTAACTGGAAGTGACAAAAAGTATACTGCGCCAAACACCAAGAACATGGATGACCAGAACTGCGAATCTTTCCTCAGCAGATGTGGGGGTTCATAGAATGCTTTGATCACATTTGACAGCAGTATAGCAAAGATTGGGAAGATTACTCCGCTGATGACAGATGCAATGGAACCTAGTATGAGCACTGGAATTTCTGGCTTGTTCAGAGACGCAAGACGACTTAGAGGCACATCCTGTGGCATCCCATCACATAGATTATCAGAGGAACCATCCTGGATGTCAATCCCTAGGGGCATACCAAATGGTACAGAGAATGAATGGTGGCTGTTATCACGGGATGACCTCCGGCTGCGGCTAGCAGACTGATTTATTGACAATTGTTTGCCTGAACGAGCTCCAGAGTCACCCTTTCGGTCAGACTTGTCCTGCCGGTTTGCTTCCTGCAGCTTTATCAGTTGGCTGTAAGCTCCTTCAGGATCCTTCAGAAGCTCATGGTGTGGACCTGACCAAAAATGTTAAATGTTTAAGGAAAGATGCAATGGGCAACTGAGAGCTCATAAAATGGATGATTTTGATCATTGATATGAGCCTTTTGGGAATTTTACCTTTTTCCACTAATGTTCCTTGATGAATGACAGCGATGGTGTCAGCATTTCTAACTGTACTCAAGCGGTGTGCAACTATGACAGTTGTTCTGTTAGTCATGACCCTGTCAAGAGCCTCCTGCACAATCCTCTCAGACTCAGCATCCAGAGCGCTTGTAGCTTCATCTAGCAGTAGGATCCTTGGATCCTTTAGAATTGCTCTTGCTATGGCAATTCTTTGCTTCTGCCCACCAGAAAGCTGAGTCCCATGTTCACCAACTGAAGTATCAAGGCCCTGTAAATATTGGCAAGGAGAAGGAAGAAATCTCAGTATGTTATGCCCAATGATCTAAAAATTCTGAATACTGGAAACA]

[+] EMBL AK119474             [GGATGGTTTCGTACCTTCCCAGAATGAATTGTCAAGCACAAGTCTCGGAATATCTCAACATCTGGCCTGGTTGGATATCTGAAGCTAACATGCTGGAACTCAATATTGCCGTGCAGTGTTTCGACAGTTACCCCTGCATCCTCACTTGGGTCTATCCTAGATTTACGATCCACAATTGCAAATATCGAAGACACAGCTGATTTTGCTTTGGAAGAATCTGATGTAAGGGTACTTGATTGCGACACCCCAATCGCTGCCATAGCAAGAGCAAGAAAAACCTGCATTCAGATGGCAGAAAAATTGAGTTCTTCATTTCAAAAATATGTGAGCGATGTTAAAAGTTTATATATGAAGTAGCTGAAGTTTAAATTCTCCTACCACTGCCGGAGTACAGAATACTTACCCTGAAAACTTTAGGAAAAGTTGTCTTGTTTTCCTCAACAAGCCGAGCACCAGCATAAAAGCTAGCTGCATATACACCAAATAGCAAGAAAAATGAAACACCAAAGCCAATTCCACTTATAATCCCTGTTCTAATCCCTGTCCTTAGGGGGCCTTCACATTTCTTCTTGTACAAATCCATAACCTTTTCTTCTGCTGAGAAGGAGACTACGGTTCTTATACTGCTTACTGCATCATTTGCCACTTGACTTGCCTCCTCATACATCATCTGCATAAACAAGTAAAGAAGTCAGGTTTTGCGGAAGTAATAATCCAGCAAAACAAACATTTCAGTAGAGGACAAACCTTTGCATCTGCACTGAAACCCTGAATGAATTTCATCTGGATCCATCCATTTAGACCAATGAGTGGTATTAAAGCTAAGATGATGAGTGATAACTCCCAGTTTGATACAAAGGCAATGACTAAACCAGCAATCAAGGTTGTTGTGTTTTGTACAACTAATTGAAGTGCATCACCCACAAGCCCCCTAACTTTAGCTGCATCAGCTGATAGCCTTGCACCAATTGCTCCACTTGAGTTTTCTGGGTGATCAAACCATTCGATCTCCATATTTACCACCTTCTCAAATGTCATCAATCTTATCCTTTTGATCAACCTGCACCCAGCTATAGAGAAAAGGTACGAACTAACTGGAAGTGACAAAAAGTATACTGCGCCAAACACCAAGAACATGGATGACCAGAACTGCGAATCTTTCCTCAGCAGATGTGGGGGTTCATAGAATGCTTTGATCACATTTGACAGCAGTATAGCAAAGATTGGGAAGATTACTCCGCTGATGACAGATGCAATGGAACCTAGTATGAGCACTGGAATTTCTGGCTTGTTCAGAGACGCAAGACGACTTAGAGGCACATCCTGTGGCATCCCATCACATAGATTATCAGAGGAACCATCCTGGATGTCAATCCCTAGGGGCATACCAAATGGTACAGAGAATGAATGGTGGCTGTTATCACGGGATGACCTCCGGCTGCGGCTAGCAGACTGATTTATTGACAATTGTTTGCCTGAACGAGCTCCAGAGTCACCCTTTCGGTCAGACTTGTCCTGCCGGTTTGCTTCCTGCAGCTTTATCAGTTGGCTGTAAGCTCCTTCAGGATCCTTCAGAAGCTCATGGTGTGGACCTGACCAAAAATGTTAAATGTTTAAGGAAAGATGCAATGGGCAACTGAGAGCTCATAAAATGGATGATTTTGATCATTGATATGAGCCTTTTGGGAATTTTACCTTTTTCCACTAATGTTCCTTGATGAATGACAGCGATGGTGTCAGCATTTCTAACTGTACTCAAGCGGTGTGCAACTATGACAGTTGTTCTGTTAGTCATGACCCTGTCAAGAGCCTCCTGCACAATCCTCTCAGACTCAGCATCCAGAGCGCTTGTAGCTTCATCTAGCAGTAGGATCCTTGGATCCTTTAGAATTGCTCTTGCTATGGCAATTCTTTGCTTCTGCCCACCAGAAAGCTGAGTCCCATGTTCACCAACTGAAGTATCAAGGCCCTGTAAATATTGGCAAGGAGAAGGAAGAAATCTCAGTATGTTATGCCCAATGATCTAAAAATTCTGAATACTGGAAACA]


>consensus_8091#0 GGATGGTTTCGTACCTTCCCAGAATGAATTGTCAAGCACAAGTCTCGGAATATCTCAACA TCTGGCCTGGTTGGATATCTGAAGCTAACATGCTGGAACTCAATATTGCCGTGCAGTGTT TCGACAGTTACCCCTGCATCCTCACTTGGGTCTATCCTAGATTTACGATCCACAATTGCA AATATCGAAGACACAGCTGATTTTGCTTTGGAAGAATCTGATGTAAGGGTACTTGATTGC GACACCCCAATCGCTGCCATAGCAAGAGCAAGAAAAACCTGCATTCAGATGGCAGAAAAA TTGAGTTCTTCATTTCAAAAATATGTGAGCGATGTTAAAAGTTTATATATGAAGTAGCTG AAGTTTAAATTCTCCTACCACTGCCGGAGTACAGAATACTTACCCTGAAAACTTTAGGAA AAGTTGTCTTGTTTTCCTCAACAAGCCGAGCACCAGCATAAAAGCTAGCTGCATATACAC CAAATAGCAAGAAAAATGAAACACCAAAGCCAATTCCACTTATAATCCCTGTTCTAATCC CTGTCCTTAGGGGGCCTTCACATTTCTTCTTGTACAAATCCATAACCTTTTCTTCTGCTG AGAAGGAGACTACGGTTCTTATACTGCTTACTGCATCATTTGCCACTTGACTTGCCTCCT CATACATCATCTGCATAAACAAGTAAAGAAGTCAGGTTTTGCGGAAGTAATAATCCAGCA AAACAAACATTTCAGTAGAGGACAAACCTTTGCATCTGCACTGAAACCCTGAATGAATTT CATCTGGATCCATCCATTTAGACCAATGAGTGGTATTAAAGCTAAGATGATGAGTGATAA CTCCCAGTTTGATACAAAGGCAATGACTAAACCAGCAATCAAGGTTGTTGTGTTTTGTAC AACTAATTGAAGTGCATCACCCACAAGCCCCCTAACTTTAGCTGCATCAGCTGATAGCCT TGCACCAATTGCTCCACTTGAGTTTTCTGGGTGATCAAACCATTCGATCTCCATATTTAC CACCTTCTCAAATGTCATCAATCTTATCCTTTTGATCAACCTGCACCCAGCTATAGAGAA AAGGTACGAACTAACTGGAAGTGACAAAAAGTATACTGCGCCAAACACCAAGAACATGGA TGACCAGAACTGCGAATCTTTCCTCAGCAGATGTGGGGGTTCATAGAATGCTTTGATCAC ATTTGACAGCAGTATAGCAAAGATTGGGAAGATTACTCCGCTGATGACAGATGCAATGGA ACCTAGTATGAGCACTGGAATTTCTGGCTTGTTCAGAGACGCAAGACGACTTAGAGGCAC ATCCTGTGGCATCCCATCACATAGATTATCAGAGGAACCATCCTGGATGTCAATCCCTAG GGGCATACCAAATGGTACAGAGAATGAATGGTGGCTGTTATCACGGGATGACCTCCGGCT GCGGCTAGCAGACTGATTTATTGACAATTGTTTGCCTGAACGAGCTCCAGAGTCACCCTT TCGGTCAGACTTGTCCTGCCGGTTTGCTTCCTGCAGCTTTATCAGTTGGCTGTAAGCTCC TTCAGGATCCTTCAGAAGCTCATGGTGTGGACCTGACCAAAAATGTTAAATGTTTAAGGA AAGATGCAATGGGCAACTGAGAGCTCATAAAATGGATGATTTTGATCATTGATATGAGCC TTTTGGGAATTTTACCTTTTTCCACTAATGTTCCTTGATGAATGACAGCGATGGTGTCAG CATTTCTAACTGTACTCAAGCGGTGTGCAACTATGACAGTTGTTCTGTTAGTCATGACCC TGTCAAGAGCCTCCTGCACAATCCTCTCAGACTCAGCATCCAGAGCGCTTGTAGCTTCAT CTAGCAGTAGGATCCTTGGATCCTTTAGAATTGCTCTTGCTATGGCAATTCTTTGCTTCT GCCCACCAGAAAGCTGAGTCCCATGTTCACCAACTGAAGTATCAAGGCCCTGTAAATATT GGCAAGGAGAAGGAAGAAATCTCAGTATGTTATGCCCAATGATCTAAAAATTCTGAATAC TGGAAACA



consensusID : consensus_8091#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 752
fasta sequence
                              [TACGATCCACAATTGCAAATATCGAAGACACAGCTGATTTTGCTTTGGAAGAATCTGATGTAAGGGTACTTGATTGCGACACCCCAATCGCTGCCATAGCAAGAGCAAGAAAAACCCTGAAAACTTTAGGAAAAGTTGTCTTGTTTTCCTCAACAAGCCGAGCACCAGCATAAAAGCTAGCTGCATATACACCAAATAGCAAGAAAAATGAAACACCAAAGCCAATTCCACTTATAATCCCTGTTCTAATCCCTGTCCTTAGGGGGCCTTCACATTTCTTCTTGTACAAATCCATAACCTTTTCTTCTGCTGAGAAGGAGACTACGGTTCTTATACTGCTTACTGCATCATTTGCCACTTGACTTGCCTCCTCATACATCATCTTTGCATCTGCACTGAAACCCTGAATGAATTTCATCTGGATCCATCCATTTAGACCAATGAGTGGTATTAAAGCTAAGATGATGAGTGATAACTCCCAGTTTGATACAAAGGCAATGACTAAACCAGCAATCAAGGTTGTTGTGTTTTGTACAACTAATTGAAGTGCATCACCCACAAGCCCCCTAACTTTAGCTGCATCAGCTGATAGCCTTGCACCAATTGCTCCACTTGAGTTTTCTGGGTGATCAAACCATTCGATCTCCATATTTACCACCTTCTCAAATGTCATCAATCTTATCCTTTTGATCAACCTGCACCCAGCTATAGAGAAAAGGTACGAACTAACTGGAAGTGACAAAAGGTATACT]

[-] EMBL CB619517             [TACGATCCACAATTGCAAATATCGAAGACACAGCTGATTTTGCTTTGGAAGAATCTGATGTAAGGGTACTTGATTGCGACACCCCAATCGCTGCCATAGCAAGAGCAAGAAAAACCCTGAAAACTTTAGGAAAAGTTGTCTTGTTTTCCTCAACAAGCCGAGCACCAGCATAAAAGCTAGCTGCATATACACCAAATAGCAAGAAAAATGAAACACCAAAGCCAATTCCACTTATAATCCCTGTTCTAATCCCTGTCCTTAGGGGGCCTTCACATTTCTTCTTGTACAAATCCATAACCTTTTCTTCTGCTGAGAAGGAGACTACGGTTCTTATACTGCTTACTGCATCATTTGCCACTTGACTTGCCTCCTCATACATCATCTTTGCATCTGCACTGAAACCCTGAATGAATTTCATCTGGATCCATCCATTTAGACCAATGAGTGGTATTAAAGCTAAGATGATGAGTGATAACTCCCAGTTTGATACAAAGGCAATGACTAAACCAGCAATCAAGGTTGTTGTGTTTTGTACAACTAATTGAAGTGCATCACCCACAAGCCCCCTAACTTTAGCTGCATCAGCTGATAGCCTTGCACCAATTGCTCCACTTGAGTTTTCTGGGTGATCAAACCATTCGATCTCCATATTTACCACCTTCTCAAATGTCATCAATCTTATCCTTTTGATCAACCTGCACCCAGCTATAGAGAAAAGGTACGAACTAACTGGAAGTGACAAAAGGTATACT]


>consensus_8091#1 TACGATCCACAATTGCAAATATCGAAGACACAGCTGATTTTGCTTTGGAAGAATCTGATG TAAGGGTACTTGATTGCGACACCCCAATCGCTGCCATAGCAAGAGCAAGAAAAACCCTGA AAACTTTAGGAAAAGTTGTCTTGTTTTCCTCAACAAGCCGAGCACCAGCATAAAAGCTAG CTGCATATACACCAAATAGCAAGAAAAATGAAACACCAAAGCCAATTCCACTTATAATCC CTGTTCTAATCCCTGTCCTTAGGGGGCCTTCACATTTCTTCTTGTACAAATCCATAACCT TTTCTTCTGCTGAGAAGGAGACTACGGTTCTTATACTGCTTACTGCATCATTTGCCACTT GACTTGCCTCCTCATACATCATCTTTGCATCTGCACTGAAACCCTGAATGAATTTCATCT GGATCCATCCATTTAGACCAATGAGTGGTATTAAAGCTAAGATGATGAGTGATAACTCCC AGTTTGATACAAAGGCAATGACTAAACCAGCAATCAAGGTTGTTGTGTTTTGTACAACTA ATTGAAGTGCATCACCCACAAGCCCCCTAACTTTAGCTGCATCAGCTGATAGCCTTGCAC CAATTGCTCCACTTGAGTTTTCTGGGTGATCAAACCATTCGATCTCCATATTTACCACCT TCTCAAATGTCATCAATCTTATCCTTTTGATCAACCTGCACCCAGCTATAGAGAAAAGGT ACGAACTAACTGGAAGTGACAAAAGGTATACT



consensusID : consensus_8091#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 593
fasta sequence
                              [TTCTTAGTGGTCCTTCACATTTCATCTTGTACAAATCCATTACCTTCTCTTCAGCTGAAAATGAGGCTACTGTCCTTATGCTGCTCACTGCATCATTTGCCACTTGGCTTGCCTCTTCATACATCATCTTTGCATCTGCACTGAATCCCTGAATAAACTTCATCTGGATCCATCCGTTGACGCCGATGAGTGGTATCAACGCCAAGATGATCAGAGATAGCTCCCAGTTTGATATAAAAGCAATCAACAAACCAGCAACTAATGTTGCTAAATTCTGCACAACCAGTTGAAGTGCATCACCCACAAGCCCCCTAATTTTTGCTGCATCGGCCGATAGCCTTGCTCCGATTGATCCACTTGAGTTTTCTGGATGATCAAACCATTCAATCTCCATATTTACAACCTTCTCAAAAGTCATCAGTCTGATCCTTCTGATCAACCTACACCCAGCCACTGAAAAAAGGTATGAGCCAATAGGAAGTGACAAGAAGTACACTGCCCCAAACACTAAGAACATCGATGACCAAAACTCAGCATCCTTCTTTAGCACTTGTGGGGGCTCATAAAATGCTTTGATCACATTGGATAAAAGT]

[-] EMBL CB671204             [TTCTTAGTGGTCCTTCACATTTCATCTTGTACAAATCCATTACCTTCTCTTCAGCTGAAAATGAGGCTACTGTCCTTATGCTGCTCACTGCATCATTTGCCACTTGGCTTGCCTCTTCATACATCATCTTTGCATCTGCACTGAATCCCTGAATAAACTTCATCTGGATCCATCCGTTGACGCCGATGAGTGGTATCAACGCCAAGATGATCAGAGATAGCTCCCAGTTTGATATAAAAGCAATCAACAAACCAGCAACTAATGTTGCTAAATTCTGCACAACCAGTTGAAGTGCATCACCCACAAGCCCCCTAATTTTTGCTGCATCGGCCGATAGCCTTGCTCCGATTGATCCACTTGAGTTTTCTGGATGATCAAACCATTCAATCTCCATATTTACAACCTTCTCAAAAGTCATCAGTCTGATCCTTCTGATCAACCTACACCCAGCCACTGAAAAAAGGTATGAGCCAATAGGAAGTGACAAGAAGTACACTGCCCCAAACACTAAGAACATCGATGACCAAAACTCAGCATCCTTCTTTAGCACTTGTGGGGGCTCATAAAATGCTTTGATCACATTGGATAAAAGT]
[-] EMBL CB675287             [TTCTTAGTGGTCCTTCACATTTCATCTTGTACAAATCCATTACCTTCTCTTCAGCTGAAAATGAGGCTACTGTCCTTATGCTGCTCACTGCATCATTTGCCACTTGGCTTGCCTCTTCATACATCATCTTTGCATCTGCACTGAATCCCTGAATAAACTTCATCTGGATCCATCCGTTGACGCCGATGAGTGGTATCAACGCCAAGATGATCAGAGATAGCTCCCAGTTTGATATAAAAGCAATCAACAAACCAGCAACTAATGTTGCTAAATTCTGCACAACCAGTTGAAGTGCATCACCCACAAGCCCCCTAATTTTTGCTGCATCGGCCGATAGCCTTGCTCCGATTGATCCACTTGAGTTTTCTGGATGATCAAACCATTCAATCTCCATATTTACAACCTTCTCAAAAGTCATCAGTAGGATCCTT                                                                                                                                                                  ]


>consensus_8091#2 TTCTTAGTGGTCCTTCACATTTCATCTTGTACAAATCCATTACCTTCTCTTCAGCTGAAA ATGAGGCTACTGTCCTTATGCTGCTCACTGCATCATTTGCCACTTGGCTTGCCTCTTCAT ACATCATCTTTGCATCTGCACTGAATCCCTGAATAAACTTCATCTGGATCCATCCGTTGA CGCCGATGAGTGGTATCAACGCCAAGATGATCAGAGATAGCTCCCAGTTTGATATAAAAG CAATCAACAAACCAGCAACTAATGTTGCTAAATTCTGCACAACCAGTTGAAGTGCATCAC CCACAAGCCCCCTAATTTTTGCTGCATCGGCCGATAGCCTTGCTCCGATTGATCCACTTG AGTTTTCTGGATGATCAAACCATTCAATCTCCATATTTACAACCTTCTCAAAAGTCATCA GTCTGATCCTTCTGATCAACCTACACCCAGCCACTGAAAAAAGGTATGAGCCAATAGGAA GTGACAAGAAGTACACTGCCCCAAACACTAAGAACATCGATGACCAAAACTCAGCATCCT TCTTTAGCACTTGTGGGGGCTCATAAAATGCTTTGATCACATTGGATAAAAGT



consensusID : consensus_8091#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 443
fasta sequence
                              [GAGCACTGGAATTTCTGGCTTGTTCAGAGACGCAAGACGACTTAGAGGCACATCCTGTGGCATCCCATCACATAGATTATCAGAGGAACCATCCTGGATGTCAATCCCTAGGGGCATACCAAATGGTACAGAGAATGAATGGTGGCTGTTATCACGGGATGACCTCCGGCTGCGGCTAGCAGACTGATTTATTGACAATTGTTTGCCTGAACGAGCTCCAGAGTCACCCTTTCGGTCAGACTTGTCCTGCCGGTTTGCTTCCTGCAGCTTTATCAGTTGGCTGTAAGCTCCTTCAGGATCCTTCAGAAGCTCATGGTGTGGACCTTTTTCCACTAATGTTCCTTGATGAATGACAGCGATGGTGTCAGCATTTCTAACTGTACTCAAGCGGTGTGCAACTATGACAGTTGTTCTGTTAGTCATGACCCTGTCAAGAGCCTCCT]

[-] EMBL AU181972             [GAGCACTGGAATTTCTGGCTTGTTCAGAGACGCAAGACGACTTAGAGGCACATCCTGTGGCATCCCATCACATAGATTATCAGAGGAACCATCCTGGATGTCAATCCCTAGGGGCATACCAAATGGTACAGAGAATGAATGGTGGCTGTTATCACGGGATGACCTCCGGCTGCGGCTAGCAGACTGATTTATTGACAATTGTTTGCCTGAACGAGCTCCAGAGTCACCCTTTCGGTCAGACTTGTCCTGCCGGTTTGCTTCCTGCAGCTTTATCAGTTGGCTGTAAGCTCCTTCAGGATCCTTCAGAAGCTCATGGTGTGGACCTTTTTCCACTAATGTTCCTTGATGAATGACAGCGATGGTGTCAGCATTTCTAACTGTACTCAAGCGGTGTGCAACTATGACAGTTGTTCTGTTAGTCATGACCCTGTCAAGAGCCTCCT]


>consensus_8091#3 GAGCACTGGAATTTCTGGCTTGTTCAGAGACGCAAGACGACTTAGAGGCACATCCTGTGG CATCCCATCACATAGATTATCAGAGGAACCATCCTGGATGTCAATCCCTAGGGGCATACC AAATGGTACAGAGAATGAATGGTGGCTGTTATCACGGGATGACCTCCGGCTGCGGCTAGC AGACTGATTTATTGACAATTGTTTGCCTGAACGAGCTCCAGAGTCACCCTTTCGGTCAGA CTTGTCCTGCCGGTTTGCTTCCTGCAGCTTTATCAGTTGGCTGTAAGCTCCTTCAGGATC CTTCAGAAGCTCATGGTGTGGACCTTTTTCCACTAATGTTCCTTGATGAATGACAGCGAT GGTGTCAGCATTTCTAACTGTACTCAAGCGGTGTGCAACTATGACAGTTGTTCTGTTAGT CATGACCCTGTCAAGAGCCTCCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8091#0      GGATGGTTTCGTACCTTCCCAGAATGAATTGTCAAGCACAAGTCTCGGAATATCTCAACA 60
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      TCTGGCCTGGTTGGATATCTGAAGCTAACATGCTGGAACTCAATATTGCCGTGCAGTGTT 120
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      TCGACAGTTACCCCTGCATCCTCACTTGGGTCTATCCTAGATTTACGATCCACAATTGCA 180
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      AATATCGAAGACACAGCTGATTTTGCTTTGGAAGAATCTGATGTAAGGGTACTTGATTGC 240
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      GACACCCCAATCGCTGCCATAGCAAGAGCAAGAAAAACCTGCATTCAGATGGCAGAAAAA 300
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      TTGAGTTCTTCATTTCAAAAATATGTGAGCGATGTTAAAAGTTTATATATGAAGTAGCTG 360
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      AAGTTTAAATTCTCCTACCACTGCCGGAGTACAGAATACTTACCCTGAAAACTTTAGGAA 420
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      AAGTTGTCTTGTTTTCCTCAACAAGCCGAGCACCAGCATAAAAGCTAGCTGCATATACAC 480
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      CAAATAGCAAGAAAAATGAAACACCAAAGCCAATTCCACTTATAATCCCTGTTCTAATCC 540
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      CTGTCCTTAGGGGGCCTTCACATTTCTTCTTGTACAAATCCATAACCTTTTCTTCTGCTG 600
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      AGAAGGAGACTACGGTTCTTATACTGCTTACTGCATCATTTGCCACTTGACTTGCCTCCT 660
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      CATACATCATCTGCATAAACAAGTAAAGAAGTCAGGTTTTGCGGAAGTAATAATCCAGCA 720
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      AAACAAACATTTCAGTAGAGGACAAACCTTTGCATCTGCACTGAAACCCTGAATGAATTT 780
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      CATCTGGATCCATCCATTTAGACCAATGAGTGGTATTAAAGCTAAGATGATGAGTGATAA 840
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      CTCCCAGTTTGATACAAAGGCAATGACTAAACCAGCAATCAAGGTTGTTGTGTTTTGTAC 900
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      AACTAATTGAAGTGCATCACCCACAAGCCCCCTAACTTTAGCTGCATCAGCTGATAGCCT 960
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      TGCACCAATTGCTCCACTTGAGTTTTCTGGGTGATCAAACCATTCGATCTCCATATTTAC 1020
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      -----------------------------------------------TACGATCCACAAT 13
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      CACCTTCTCAAATGTCATCAATCTTATCCTTTTGATCAACCTGCACCCAGCTATAGAGAA 1080
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      TGCAAATATCGAAGACACAGCTGATTTTGCTTTGGAAGAATCTGATGTAAGGGTACTTGA 73
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      AAGGTACGAACTAACTGGAAGTGACAAAAAGTATACTGCGCCAAACACCAAGAACATGGA 1140
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      TTGCGACACCCCAATCGCTGCCATAGCAAGAGCAAGAAAAACCCTGAAAACTTTAGGAAA 133
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      TGACCAGAACTGCGAATCTTTCCTCAGCAGATGTGGGGGTTCATAGAATGCTTTGATCAC 1200
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      AGTTGTCTTGTTTTCCTCAACAAGCCGAGCACCAGCATAAAAGCTAGCTGCATATACACC 193
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      ATTTGACAGCAGTATAGCAAAGATTGGGAAGATTACTCCGCTGATGACAGATGCAATGGA 1260
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      AAATAGCAAGAAAAATGAAACACCAAAGCCAATTCCACTTATAATCCCTGTTCTAATCCC 253
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      ACCTAGTATGAGCACTGGAATTTCTGGCTTGTTCAGAGACGCAA-----------GACGA 1309
consensus_8091#3      ---------GAGCACTGGAATTTCTGGCTTGTTCAGAGACGCAA-----------GACGA 40
consensus_8091#1      TGTCCTTAGGGGGCCTTCACATTTCTTCTTGTACAAATCCATAACCTTTTCTTCTGCTGA 313
consensus_8091#2      --TTCTTAGTGGTCCTTCACATTTCATCTTGTACAAATCCATTACCTTCTCTTCAGCTGA 58
                                 *  **  *  **    ***** ** *  *   *           *  **

consensus_8091#0      CTTAGAGGC-AC-ATCCTGTGGCATCCCATCACATAGATTATCAGAGGAACCATCCTGGA 1367
consensus_8091#3      CTTAGAGGC-AC-ATCCTGTGGCATCCCATCACATAGATTATCAGAGGAACCATCCTGGA 98
consensus_8091#1      GAAGGAGACTACGGTTCTTATACTGCTTACTGCATCATTTGCCACTTGACTTGCCTC--C 371
consensus_8091#2      AAATGAGGCTACTGTCCTTATGCTGCTCACTGCATCATTTGCCACTTGGCTTGCCTC--T 116
                          *** * **  * **    *  *  *   ***   **  **   *      *     

consensus_8091#0      TGTCAATCCCTAGGGGCATACCAAATGGTACAGAGAATGAATGGTGGCTGTTATCACGGG 1427
consensus_8091#3      TGTCAATCCCTAGGGGCATACCAAATGGTACAGAGAATGAATGGTGGCTGTTATCACGGG 158
consensus_8091#1      TCATACATCATCTTTGCATCTGCACTGAAACCCTGAATGAATTTCATCTGGATCCATCCA 431
consensus_8091#2      TCATACATCATCTTTGCATCTGCACTGAATCCCTGAATAAACTTCATCTGGATCCATCCG 176
                      *   *   * *    ****    * **   *   **** **      ***    **    

consensus_8091#0      ATGACCTCCGGCTGCGGCTAGCAGACTGATTTATTGACAATTGTTTGCCTGAACGAGCTC 1487
consensus_8091#3      ATGACCTCCGGCTGCGGCTAGCAGACTGATTTATTGACAATTGTTTGCCTGAACGAGCTC 218
consensus_8091#1      TTTAGACCAATGAGTGGTATTAAAGCTAAGATGATGAGTGATAACTCCCAGTTTGA--TA 489
consensus_8091#2      TTGACGCCGATGAGTGGTATCAACGCCAAGATGATCAGAGATAGCTCCCAGTTTGA--TA 234
                       * *   *     * **     *  *  *  *  * *    *   * ** *   **  * 

consensus_8091#0      CAGAGTCACCCTTTCGGTCAG--ACTTGTCCTGCCGGTTTGCTTCCTGCAGCTTTA--TC 1543
consensus_8091#3      CAGAGTCACCCTTTCGGTCAG--ACTTGTCCTGCCGGTTTGCTTCCTGCAGCTTTA--TC 274
consensus_8091#1      CAAAGGCAATGACTAAACCAGCAATCAAGGTTGTTGTGTTTTGTACAACTAATTGAAGTG 549
consensus_8091#2      TAAAAGCAATCAACAAACCAGCAACTAATGTTGCTAAATTCTGCACAACCAGTTGAAGTG 294
                       * *  **          ***  *       **     **     *  *   ** *  * 

consensus_8091#0      AGTTGGCTGTAAGCTCCTTCAGGATC-CTTCAGAAGCTCATGGTGTGGACCTGACCAAAA 1602
consensus_8091#3      AGTTGGCTGTAAGCTCCTTCAGGATC-CTTCAGAAGCTCATGGTGTGGACCT-------- 325
consensus_8091#1      CATCACCCACAAGCCCCCTAACTTTAGCTGCATCAGCTGATAGCCTTGCACCAATTGCTC 609
consensus_8091#2      CATCACCCACAAGCCCCCTAATTTTTGCTGCATCGGCCGATAGCCTTGCTCCGATTGATC 354
                        *   *   **** ** * *   *  ** **   **  ** *  * *  *         

consensus_8091#0      ATGTTAAATGTTTAAGGAAAGATGCAATGGGCAACTGAGAGCTCATAAAATGGATGATTT 1662
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      CACTTGAGTTTTCTGGGTGA---------------------------------------- 629
consensus_8091#2      CACTTGAGTTTTCTGGATGA---------------------------------------- 374
                                                                                  

consensus_8091#0      TGATCATTGATATGAGCCTTTTGGGAATTTTACCTTTTTCCACTAATGTTCCTTGATGAA 1722
consensus_8091#3      -----------------------------------TTTTCCACTAATGTTCCTTGATGAA 350
consensus_8091#1      ----------------------------------TCAAACCATTCGATCTCCATATTTAC 655
consensus_8091#2      ----------------------------------TCAAACCATTCAATCTCCATATTTAC 400
                                                             *** *     *** *  * * 

consensus_8091#0      TGACAGCGATGGTGTCAGCATTTCTAAC--TGTACTCAAGCGGTGTGCAACTAT--GACA 1778
consensus_8091#3      TGACAGCGATGGTGTCAGCATTTCTAAC--TGTACTCAAGCGGTGTGCAACTAT--GACA 406
consensus_8091#1      CACCTTCTCAAATGTCATCAATCTTATCCTTTTGATCAACCTGCACCCAGCTATAGAGAA 715
consensus_8091#2      AACCTTCTCAAAAGTCATCAGTCTGATCCTTCTGATCAACCTACACCCAGCCACTGAAAA 460
                         *  *      **** ** *   * *  * *  **** *      ** * *      *

consensus_8091#0      GTTGTTCTGTTAGTCATGACCCTGTCAAGAGCCTCCTGCACAATCCTCTCAGACTCAGCA 1838
consensus_8091#3      GTTGTTCTGTTAGTCATGACCCTGTCAAGAGCCTCCT----------------------- 443
consensus_8091#1      AAGGTACGAACTAACTGGAAGTGACAAAAGGTATACT----------------------- 752
consensus_8091#2      AAGGTATGAGCCAATAGGAAGTGACAAGAAGTACACTGCCCCAAACACTAAGAACATCGA 520
                         **            **       *   *    **                       

consensus_8091#0      TCCAGAGCGCTTGTAGCTTCATCTAGCAGTAGGATCCTTGGATCCTTTAGAATTGCTCTT 1898
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      TGACCAAAACTCAGCATCCTTCTTTAGCACTTGTGGGGGCTCATAAAATGCTTTGATCAC 580
                                                                                  

consensus_8091#0      GCTATGGCAATTCTTTGCTTCTGCCCACCAGAAAGCTGAGTCCCATGTTCACCAACTGAA 1958
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ATTGGATAAAAGT----------------------------------------------- 593
                                                                                  

consensus_8091#0      GTATCAAGGCCCTGTAAATATTGGCAAGGAGAAGGAAGAAATCTCAGTATGTTATGCCCA 2018
consensus_8091#3      ------------------------------------------------------------
consensus_8091#1      ------------------------------------------------------------
consensus_8091#2      ------------------------------------------------------------
                                                                                  

consensus_8091#0      ATGATCTAAAAATTCTGAATACTGGAAACA 2048
consensus_8091#3      ------------------------------
consensus_8091#1      ------------------------------
consensus_8091#2      ------------------------------
                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)