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Oryza sativa
cluster # 8095 cluster # 8095       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8095#0 length = 1481 sequences # 5  

consensusID : consensus_8095#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1481
fasta sequence
                              [TTTTTGGGGTCCGGTCCAAGCATACAACAAATGAACATAAGTACCACT-AAATCTTTAGAAAATGTTTTTTAACATCGTCTGTGTGGCTCCCAATGGCAGGAAAGATTATTAACCCAAGTTACAAATCTGGACGGCAAGAGGAAAACACCTGTCTCAGACCAAAAAATTATCTGCATCTAACATATAAAAAAGCTGACTACCACACCAGACTAAGTTATTACTAGTCATTAAAACAAAAACCTCTTGTTTGCTGAAATATTAAATGGTTGTTAACAAGCTCCGAGCAAGTCACCCGCAACCAATCAACATAAAAAAGAACAGGGTCAGACTGTACTGCTGTATCTAAAACTATACCAGCTATCACCACTTCACCATTAAAATGGCTGCTGTAAACCAACAGTTCCATTTCAACTGCTTTCGCCGTCTCCATCCCAACAGGCAGCAATGAATCAGACCTCATTAGCCATTACCAATTGCCTGTCTCCAATCCCTTGAGCGATTATCAGCCCCGCGGTGGCCCTGACTCGCACCAATGGACCATTTCTTTTCTTGTAATCCCAACAAAGAGTGGTTATTTCTTTTTTTGTCTTCTGCAAAGCTAAACTATCACTTCTGCAACGCTAAACTATCACACGCAAAGGCAAGAATGTACAAAGAAATTACAGAGAATTTATATGTACAGGCGAGAAAGGCATCTTTGTATATCCTCAAACAGGTAAATCCACCCATGTTGCCGTTCACCCGAGCGACCTGAGGCGGAGCAAGATTTCTGGTAAAGATCCCACACCATACATTCATCTGTTTCGTTCTCTCGTTCACATTAACTCAGTTTGCACCGTTCTACAACTTCAGCCCAATTGGATCATCGTTTGCTTGGAACCCTTTGTAGCAGCAAAAGACTGGCCAGCCCCACTTGACGCTTGTACTTTCTGGCTGTGAAGACCAAGGAAACAAACGTCTTCTGGCCTTTCTTGAGACAAGATTAACCATCTTGA-TCTCAGCTGCTCCTATCCACCAGGCTCTTGTGGTTCATGGGCCTGTGTATTTCGATTCCGCAACTTGTCTTTAGAAAGAGAGTCACGAGGAACATATGCATACCCCTTCGGAAGACGTTGGTTCTGTGTAGAAGCTTGATCAGATGTCATAAAAAGCTCCTTTTGAAATGTTTCCCTATTCTTCTTAT-CTTCGTCTTCTTTTCTCCAG-TTCCAAATTCTGTGAGGTAAC-GGTCTTCGCGGGAGCTG--TAACAGCAGTTGATCCTCTTTCACTAAGCTTCCGTTTGAACGATATCAGTGTCCTTGAGCTATCAGCTGTGTTTATCTCAGCATCCCTGTTATTCAGAGAAAACGTGATCGCCTTTTTCCCAGAAATAGTGCTGTACACTGTTACATCATCAGACCTTTGCATGGTTCCGCTGTATGATTTGTTGTTAACAGATAGTAGTGGCAGATTCAGAACTTGCTCCATGCTAGGTAGGAGAAAAC]

[-] EMBL AU165038             [TTTTTGGGGTCCGGTCCAAGCATACAACAAATGAACATAAGTACCACT AAATCTTTAGAAAATGTTTTTTAACATCGTCTGTGTGGCTCCCAATGGCAGGAAAGATTATTAACCCAAGTTACAAATCTGGACGGCAAGAGGAAAACACCTGTCTCAGACCAAAAAATTATCTGCATCTAACATATAAAAAAGCTGACTACCACACCAGACTAAGTTATTACTAGTCATTAAAACAAAAACCTCTTGTTTGCTGAAATATTAAATGGTTGTTAACAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB630848             [                                 AACATAAGTACCACTAAAATCTTTAGAAAATGTTTTTTTACATCGTCTGTGTGGCTCCCAATGGCAGGAAAGATTATTAACCCAAGTTACAAATCTGGACGGCAAGAGGAAAACACCTGTCTCAGACCAAAAAATTATCTGCATCTAACATATAAAAAAGCTGACTACCACACCAGACTAAGTTATTACTAGTCATTAAAACAAAAACCTCTTGTTTGCTGAAATATTAAATGGTTGTTAACAAGCTCCGAGCAAGTCACCCGCAACCAATCAACATAAAAAAGAACAGGGTCAGACTGTACTGCTGTATCTAAAACTATACCAGCTATCACCACTTCACCATTAAAATGGCTGCTGTAAACCAACAGTTCCATTTCAACTGCTTTCGCCGTCTCCATCCCAACAGGCAGCAATGAATCAGACCTCATTAGCCATTACCAATTGCCTGTCTCCAATCCCTTGAGCGATTATCAGCCCCGCGGTGGCCCTGACTCGCACCAATGGACCATTTCTTTTCTTGTAATCCCAACAAAGAGTGGTTATTTCTTTTTTTGTCTTCTGCAAAGCTAAACTATCACTTCTGCAACGCTAAACTATCACACGCAAAGGCAAGAATGTACAAAGAAATTACAGAGAATTTATATGTACAGGCGAGAAAGGCATCTTTGTATATCCTCAAACAGGTAAATCCACCCATGTTGCCGTTCACCCGAGCGACCTGAGGCGGAGCAAGATTTCTGGTAAAGATCCCACACCATACATTCATCTGTTTCGTTCTCTCGTTCACATTAACTCAGTTTGCACCGTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BI803748             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTTTTTTTACAGGCGAGAAAGGCATC  TGGGTATCCTCAAACAGGTAAATCCACCCATGTTGCCGTTCACCCGAGCGACCTGAGGCGGAGCAAGATTTCTGGTAAAGATCCCACACCATACATTCATCTGTTTCGTTCTCTCGTTCACATTAACTCAG TTGCACCGTTCTACAACTTCAGCCCAA TGGATCATCG TTGCTTGGAACCC TTGTAGCAGCAAAAGACTGGCCAGCCCCACTTGACGCTTGTACTTTCTGGCTGTGAAGACCAAGGAAACAAACGTCTTCTGGCCTTTCTTGAGACAAGATTAACCATCTTGACTCTCAGCTGCTCCTATCCACCAGGCTCTTGTGGTTCATGGGCCTGTGTATTTCGATTCCGCAACTTGTCTTTAGAAAGAGAGTCACGAGGAACATATGCATACCCCTTCGGAAGACG TGGTTCTGTGTAGAAGCTTGATCAGATGTCATAAAAAGCTCCTTTTGAAATGTTTCCCTATTCTTCTTAT CTTCGTCTTCTTTTCTCCAG TTCCAAATTCTGTGAGGTAAC GGTCTTCGCGGGAGCTG  TAACAGCAGT                                                                                                                                                                                                                                      ]
[-] EMBL AK063192             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAAGGCATCTTTGTATATCCTCAAACAGGTAAATCCACCCATGTTGCCGTTCACCCGAGCGACCTGAGGCGGAGCAAGATTTCTGGTAAAGATCCCACACCATACATTCATCTGTTTCGTTCTCTCGTTCACATTAACTCAGTTTGCACCGTTCTACAACTTCAGCCCAATTGGATCATCGTTTGCTTGGAACCCTTTGTAGCAGCAAAAGACTGGCCAGCCCCACTTGACGCTTGTACTTTCTGGCTGTGAAGACCAAGGAAACAAACGTCTTCTGGCCTTTCTTGAGACAAGATTAACCATCTTGA TCTCAGCTGCTCCTATCCACCAGGCTCTTGTGGTTCATGGGCCTGTGTATTTCGATTCCGCAACTTGTCTTTAGAAAGAGAGTCACGAGGAACATATGCATACCCCTTCGGAAGACGTTGGTTCTGTGTAGAAGCTTGATCAGATGTCATAAAAAG                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB648351             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGCATCTTTGTATATCCTCAAACAGGTAAATCCACCCATGTTGCCGTTCACCCGAGCGACCTGAGGCGGAGCAAGATTTCTGGTAAAGATCCCACACCATACATTCATCTGTTTCGTTCTCTCGTTCACATTAACTCAGTTTGCACCGTTCTACAACTTCAGCCCAATTGGATCATCGTTTGCTTGGAACCCTTTGTAGCAGCAAAAGACTGGCCAGCCCCACTTGACGCTTGTACTTTCTGGCTGTGAAGACCAAGGAAACAAACGTCTTCTGGCCTTTCTTGAGACAAGATTAACCATCTTGA TATCAGCTGCTCCTATCCATCAGGCTCTTGTGGTTCATGGGCCTGTGTATTTTGATTCCGCAACTTGTCTTTAGAAAGAGAGTCACGAGGAACATATGCATACCCCTTCGGAAGACGTTGGTTCTGTGTAGAAGCTTGATCAGATGTCATAAAAAGCTCCTTTTGAAATGTTTCCCTATTCTTCTTATCCTTCGTCTTCTTTTCTCCAGCTTCCAATTTCTGTGAGGTAACTGGTCTTCGCGGGAGCTGCTTACCAGCAAGTGATCCTCTTTCACTAAGCTTCCGTTTGAACGATATCAGTGTCCTTGAGCTATCAGCTGTGTTTATCTCAGCATCCCTGTTATTCAGAGAAAACGTGATCGCCTTTTTCCCAGAAATAGTGCTGTACACTGTTACATCATCAGACCTTTGCATGGTTCCGCTGTATGATTTGTTGTTAACAGATAGTAGTGGCAGATTCAGAACTTGCTCCATGCTAGGTAGGAGAAAAC]


>consensus_8095#0 TTTTTGGGGTCCGGTCCAAGCATACAACAAATGAACATAAGTACCACTAAATCTTTAGAA AATGTTTTTTAACATCGTCTGTGTGGCTCCCAATGGCAGGAAAGATTATTAACCCAAGTT ACAAATCTGGACGGCAAGAGGAAAACACCTGTCTCAGACCAAAAAATTATCTGCATCTAA CATATAAAAAAGCTGACTACCACACCAGACTAAGTTATTACTAGTCATTAAAACAAAAAC CTCTTGTTTGCTGAAATATTAAATGGTTGTTAACAAGCTCCGAGCAAGTCACCCGCAACC AATCAACATAAAAAAGAACAGGGTCAGACTGTACTGCTGTATCTAAAACTATACCAGCTA TCACCACTTCACCATTAAAATGGCTGCTGTAAACCAACAGTTCCATTTCAACTGCTTTCG CCGTCTCCATCCCAACAGGCAGCAATGAATCAGACCTCATTAGCCATTACCAATTGCCTG TCTCCAATCCCTTGAGCGATTATCAGCCCCGCGGTGGCCCTGACTCGCACCAATGGACCA TTTCTTTTCTTGTAATCCCAACAAAGAGTGGTTATTTCTTTTTTTGTCTTCTGCAAAGCT AAACTATCACTTCTGCAACGCTAAACTATCACACGCAAAGGCAAGAATGTACAAAGAAAT TACAGAGAATTTATATGTACAGGCGAGAAAGGCATCTTTGTATATCCTCAAACAGGTAAA TCCACCCATGTTGCCGTTCACCCGAGCGACCTGAGGCGGAGCAAGATTTCTGGTAAAGAT CCCACACCATACATTCATCTGTTTCGTTCTCTCGTTCACATTAACTCAGTTTGCACCGTT CTACAACTTCAGCCCAATTGGATCATCGTTTGCTTGGAACCCTTTGTAGCAGCAAAAGAC TGGCCAGCCCCACTTGACGCTTGTACTTTCTGGCTGTGAAGACCAAGGAAACAAACGTCT TCTGGCCTTTCTTGAGACAAGATTAACCATCTTGATCTCAGCTGCTCCTATCCACCAGGC TCTTGTGGTTCATGGGCCTGTGTATTTCGATTCCGCAACTTGTCTTTAGAAAGAGAGTCA CGAGGAACATATGCATACCCCTTCGGAAGACGTTGGTTCTGTGTAGAAGCTTGATCAGAT GTCATAAAAAGCTCCTTTTGAAATGTTTCCCTATTCTTCTTATCTTCGTCTTCTTTTCTC CAGTTCCAAATTCTGTGAGGTAACGGTCTTCGCGGGAGCTGTAACAGCAGTTGATCCTCT TTCACTAAGCTTCCGTTTGAACGATATCAGTGTCCTTGAGCTATCAGCTGTGTTTATCTC AGCATCCCTGTTATTCAGAGAAAACGTGATCGCCTTTTTCCCAGAAATAGTGCTGTACAC TGTTACATCATCAGACCTTTGCATGGTTCCGCTGTATGATTTGTTGTTAACAGATAGTAG TGGCAGATTCAGAACTTGCTCCATGCTAGGTAGGAGAAAAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)