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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8103#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2915 fasta sequence
[TTCCCCGAGTAGCCTCGCCGTCGCCGTCGCCGGAGATGGAGGCGGCGCGGGAGTCAATGGCGGCGCTCGTCGACGCCGGCCTCTACGACTGCGCCCAGACGCTCGGGTGCTTTCTTGTGTCTTCATCACCTGCGAGCAGCGAGGCTGGTATGTCCATGAAGGTGGAAAGCTTGGTACTGCATGGTGATGCTTTGCGTGGAGAGAAAGAATTTCGCAGGGCACTGAGTGCCTACAAACAAGCTATGCAATACAGCAAAAACATTCCTGGGCAAGCAACAAGTAATACTAGAAGCTCAGTAACTGCCACTGGCCGGTCTCCTTCTCCAAATTCTTCAAGTCTTGCACCACTCAATGAAAATGAGGTGAAATTTAAAATTGCACTTTGCTATTCTGCTCTACGTGAGCATCGTGAAGCACTTCAAGAGGATGACTCGGACTCACTTGTGGTAGCTTCTTCTGTATGATGGAAGACATATGATGCAAAACATGGCCTCTATGTTGCCTGCAGATGGAAGGGATTCCTTCTAAAGCGAGGACTCTAAAAATGAATCTGATGTTAGGGAAGCTATATCGGATATCCAGAAATAATCGTGCAGCTGCTGTATGTTATAAAGAGTGCCTGAGGCAATGCCCTTATGTTTTTGAGGCTATTACAGCTTTGGCTGAAATGGGGCTTTCTTCAAAGGAGTTCTCTTTGATATTCTCACAAGCACCAAATCGAGGAGGCAAGGCTCCAGGTGACTCTTTAGATGCACAGCGTTGGTGGAACCGCTATGTTGAGGCCCAATGTTGCATTGCTTCACATGATTATAAAGGTGGCCTTGACATATATCTAGACTTAATGCAGCGATTCCCGAACAATGTGCACATCTTGCTGGAAATTGCTAAGGTTGAAGCCATCATAGGTAGGAATGATGAAGCTATCATGAACTTTGAAAAGGCTCGGTTAATTGATCCAAACATCATGACATATATGGATGAGTATGCAATTCTCCTTAAGTCAAAATCTGACTACACAAAGCTTAACAAGTTGGTACATGATATGCTGCATATTGACCCTGCAAGACCAGAAACATGTCTTGCTCTTGCAGCATTGTGGGAAAGAAAAGATGAAAGAAAAGCTTTGACATATGCTGAAAAGAGTCTCCGAGTTGATGATAGACATATAACTGGATATATCATGAAGGGAAATCTTCATCTTTTGTTGAATCGACCTGATTTGGCAGTCACAGACTTCAGGGGAGCTCAAGAACTTAGGGCCGATCTTCGCTCTTATCAAGGATTGGTACGTGCTTATCTAGCGCTCTCTAAATGCAAAGATGCATTATTCACTGCACGTGAAGCAATGAAGGTTATGCATCAGTCTGCAAAAGCTCTCAAATTAGTTGGTGATGTGCATGCTATCAGTTCCAGTGGGAGAGAGAAGGCTAGGAAGTTCTATGAATCCGCCATTCGTCTTGAACCTGGATTTCTGGGAGCTGCATTGGCTTTGGCTGATCTGCATGTCGCTGAAGGACGAAATAAGGATGCAGTATTGCTGCTTGAAAGATATCTAAGACAGTGGACAGATGATTCTCTACACATCAAGTTGGCTCAAGTTTTTGCAGCAACGAATATGCTTTCTGATGCACTTTCCCACTACCAATCTGCTCTAAGGATAAACCCACATAATGAGGCCGCAAAGAAAGGATTGGAACGCTTAGAGAAGCAAATGAAGGGAGTAGACCCGGACGCGCCTGAAGAGGACGAAGAGAACGAAGCTGACGATGTCGACGGTGATCAAGACGACGCTGAACTACTGTAGAAAAAACCTGATCAACTCACATCAACCCAAGGCACCACCTCTTACCAAGCGTCAACTGCGAAAGAGGACCAAATCTGCAGCCGCTGCCACAGCAGGAGAGCCCCTCAATTGCCATATATCAACTAGCAACTTGGAAGGCACGGCAACTGGAAGACGAGTGACGACGACGGGTGCCTCTCCCTTACCGCGATGATCAGATACGTGCGGTATGTATAAGTACGGCGATTCTACCACGCACAGTGGTACATACGTATACGTACACTAGCCAGCAGCTGGAGCTGGCTGGCTTCTCTACTACACTGGCATGCAGCTTGGTGTGGCAGGCTACACCCAGAGCGCGCCGGCGTCGTGGAGGAGCGGGACAAGGCCGCCGGCGACGTGGAGCGACATGACCCGGTCGGTGGAGCCGACGAGCCTGCCGCCGATGAACACTGTCGGCACCACGACGCCGCGGCCGCGGCCACCGCCGTTGGCGGCGGTGCCGGCGAGCAACATCCCGGCGAGCGCGTTCTCCATGTCGGCGCCGGCGGGCTCCTCGTCGAGCTCCACCACGCGGGCGTCGACGCCGAGCTCCCGGAGCAGGCGCGTCACGGCGTGGGACATGCCGCACGAGCTCTTGCTGAACACCACCACCGCCTTCTGCGACGCCAGCCTTGTCACCCTGTCCATCTCTATATATGCAAATGTCTATGTGCCTAGTGTCTTCTTCCCCGTCTCCGGCGACTACGACCTGGCCGCGGAATGCGCCGGGATCTTTGGCTGGATGGATGTCACCGGCGGTGATCGCCCGATCGATCGAGGTTGTGTCACTTGTTAGTGATGCTGATCTGCTGGTTGTGCTTGCATTTGAGAGGTTAGGGAAGGCATGCTTATATAGTGTTCTTATGCATGTTGGCGAAATGGTATATCGCGCGTGCAAATGCTGGGTGAAGATGGAGTTAAAGAATCTTCAGAGGAATAATTAAAGGCGATCGATCGATTTATGCATTTCTGCGGGTTTTTTTTTTCTTCTCTCTCTCTCTTTTGGTTTTGGGATAATGCTTGGCACCATTTCTGGGTTGTGAAAAAGATGAGCTGATAGATAGGTTGGTAAGGAATATGGAACATTTTG]
[+] EMBL AK119376 [TTCCCCGAGTAGCCTCGCCGTCGCCGTCGCCGGAGATGGAGGCGGCGCGGGAGTCAATGGCGGCGCTCGTCGACGCCGGCCTCTACGACTGCGCCCAGACGCTCGGGTGCTTTCTTGTGTCTTCATCACCTGCGAGCAGCGAGGCTGGTATGTCCATGAAGGTGGAAAGCTTGGTACTGCATGGTGATGCTTTGCGTGGAGAGAAAGAATTTCGCAGGGCACTGAGTGCCTACAAACAAGCTATGCAATACAGCAAAAACATTCCTGGGCAAGCAACAAGTAATACTAGAAGCTCAGTAACTGCCACTGGCCGGTCTCCTTCTCCAAATTCTTCAAGTCTTGCACCACTCAATGAAAATGAGGTGAAATTTAAAATTGCACTTTGCTATTCTGCTCTACGTGAGCATCGTGAAGCACTTCAAGAGGATGACTCGGACTCACTTGTGGTAGCTTCTTCTGTATGATGGAAGACATATGATGCAAAACATGGCCTCTATGTTGCCTGCAGATGGAAGGGATTCCTTCTAAAGCGAGGACTCTAAAAATGAATCTGATGTTAGGGAAGCTATATCGGATATCCAGAAATAATCGTGCAGCTGCTGTATGTTATAAAGAGTGCCTGAGGCAATGCCCTTATGTTTTTGAGGCTATTACAGCTTTGGCTGAAATGGGGCTTTCTTCAAAGGAGTTCTCTTTGATATTCTCACAAGCACCAAATCGAGGAGGCAAGGCTCCAGGTGACTCTTTAGATGCACAGCGTTGGTGGAACCGCTATGTTGAGGCCCAATGTTGCATTGCTTCACATGATTATAAAGGTGGCCTTGACATATATCTAGACTTAATGCAGCGATTCCCGAACAATGTGCACATCTTGCTGGAAATTGCTAAGGTTGAAGCCATCATAGGTAGGAATGATGAAGCTATCATGAACTTTGAAAAGGCTCGGTTAATTGATCCAAACATCATGACATATATGGATGAGTATGCAATTCTCCTTAAGTCAAAATCTGACTACACAAAGCTTAACAAGTTGGTACATGATATGCTGCATATTGACCCTGCAAGACCAGAAACATGTCTTGCTCTTGCAGCATTGTGGGAAAGAAAAGATGAAAGAAAAGCTTTGACATATGCTGAAAAGAGTCTCCGAGTTGATGATAGACATATAACTGGATATATCATGAAGGGAAATCTTCATCTTTTGTTGAATCGACCTGATTTGGCAGTCACAGACTTCAGGGGAGCTCAAGAACTTAGGGCCGATCTTCGCTCTTATCAAGGATTGGTACGTGCTTATCTAGCGCTCTCTAAATGCAAAGATGCATTATTCACTGCACGTGAAGCAATGAAGGTTATGCATCAGTCTGCAAAAGCTCTCAAATTAGTTGGTGATGTGCATGCTATCAGTTCCAGTGGGAGAGAGAAGGCTAGGAAGTTCTATGAATCCGCCATTCGTCTTGAACCTGGATTTCTGGGAGCTGCATTGGCTTTGGCTGATCTGCATGTCGCTGAAGGACGAAATAAGGATGCAGTATTGCTGCTTGAAAGATATCTAAGACAGTGGACAGATGATTCTCTACACATCAAGTTGGCTCAAGTTTTTGCAGCAACGAATATGCTTTCTGATGCACTTTCCCACTACCAATCTGCTCTAAGGATAAACCCACATAATGAGGCCGCAAAGAAAGGATTGGAACGCTTAGAGAAGCAAATGAAGGGAGTAGACCCGGACGCGCCTGAAGAGGACGAAGAGAACGAAGCTGACGATGTCGACGGTGATCAAGACGACGCTGAACTACTGTAGAAAAAACCTGATCAACTCACATCAACCCAAGGCACCACCTCTTACCAAGCGTCAACTGCGAAAGAGGACCAAATCTGCAGCCGCTGCCACAGCAGGAGAGCCCCTCAATTGCCATATATCAACTAGCAACTTGGAAGGCACGGCAACTGGAAGACGAGTGACGACGACGGGTGCCTCTCCCTTACCGCGATGATCAGATACGTGCGGTATGTATAAGTACGGCGATTCTACCACGCACAGTGGTACATACGTATACGTACACTAGCCAGCAGCTGGAGCTGGCTGGCTTCTCTACTACACTGGCATGCAGCTTGGTGTGGCAGGCTACACCCAGAGCGCGCCGGCGTCGTGGAGGAGCGGGACAAGGCCGCCGGCGACGTGGAGCGACATGACCCGGTCGGTGGAGCCGACGAGCCTGCCGCCGATGAACACTGTCGGCACCACGACGCCGCGGCCGCGGCCACCGCCGTTGGCGGCGGTGCCGGCGAGCAACATCCCGGCGAGCGCGTTCTCCATGTCGGCGCCGGCGGGCTCCTCGTCGAGCTCCACCACGCGGGCGTCGACGCCGAGCTCCCGGAGCAGGCGCGTCACGGCGTGGGACATGCCGCACGAGCTCTTGCTGAACACCACCACCGCCTTCTGCGACGCCAGCCTTGTCACCCTGTCCATCTCTATATATGCAAATGTCTATGTGCCTAGTGTCTTCTTCCCCGTCTCCGGCGACTACGACCTGGCCGCGGAATGCGCCGGGATCTTTGGCTGGATGGATGTCACCGGCGGTGATCGCCCGATCGATCGAGGTTGTGTCACTTGTTAGTGATGCTGATCTGCTGGTTGTGCTTGCATTTGAGAGGTTAGGGAAGGCATGCTTATATAGTGTTCTTATGCATGTTGGCGAAATGGTATATCGCGCGTGCAAATGCTGGGTGAAGATGGAGTTAAAGAATCTTCAGAGGAATAATTAAAGGCGATCGATCGATTTATGCATTTCTGCGGGTTTTTTTTTTCTTCTCTCTCTCTCTTTTGGTTTTGGGATAATGCTTGGCACCATTTCTGGGTTGTGAAAAAGATGAGCTGATAGATAGGTTGGTAAGGAATATGGAACATTTTG]
[+] EMBL BU673487 [ CCGCCGTTGGCGGCGGTGCCGGCGAGCAACATCCCGGCGAGCGCGTTCTCCATGTCGGCGCCGGCGGGCTCCTCGTCGAGCTCCACCACGCGGGCGTCGACGCCGAGCTCCCGGAGCAGGCGCGTCACGGCGTGGGACATGCCGCACGAGCTCTTGCTGAACACCACCACCGCCTTCTGCGACGCCAGCCTTGTCACCCTGTCCATCTCTATATATGCAAATGTCTATGTGCCTAGTGTCTTCTTCCCCGTCTCCGGCGACTACGACCTGGCCGCGGAATGCGCCGGGATCTTTGGCTGGATGGATGTCACCGGCGGTGATCGCCCGATTGATCGAGGTTGTGT ]
consensusID : consensus_8103#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2245 fasta sequence
[CAAATCTCCGAACCACAAATTCCAATTCAAAAACTTTTTCCCCGAGTAGCCTCGCCGTCGCCGTCGCCGGAGATGGAGGCGGCGCGGGAGTCAATGGCGGCGCTCGTCGACGCCGGCCTCTACGACTGCGCCCAGACGCTCGGGTGCTTTCTTGTGTCTTCATCACCTGCGAGCAGCGAGGCTGGTATGTCCATGAAGGTGGAAAGCTTGGTACTGCATGGTGATGCTTTGCATGGAGAGAAAGAATTTCGCAGGGCACTGAGTGCCTACAAACAAGCTATGCAATACAGCAAAAACATTCCTAGGCAAGCAACAAGTAATACTAGAAGCTCAGTAACTGCCACTGGCCGGTCTCCTTCTCCAAATTCTTCAAGTCTTGCACCACTCAATGAAAATGAGGTGAAATTTAAAATTGCACTTTGCTATTCTGCTCTACGTGAGCATCGTGAAGCACTTCAAGAGATGGAAGGGATTCCTTCTAAAGCGAGGACTCTAAAAATGAATCTGATGTTAGGGAAGCTATATCGGATATCCAGAAATAATCGTGCAGCTGCTGTATGTTATAAAGAGTGCCTGAGGCAATGCCCTTATGTTTTTGAGGCTATTACAGCTTTGGCTGAAATGGGGCTTTCTTCAAAGGAGTTCTCTTTGATATTCTCACAAGCACCAAATCGAGGAGGCAAGGCTCCAGGTGACTCTTTAGATGCACAGCGTTGGTGGAACCGCTATGTTGAGGCCCAATGTTGCATTGCTTCACATGATTATAAAGGTGGCCTTGACATATATCTAGACTTAATGCAGCGATTCCCGAACAATGTGCACATCTTGCTGGAAATTGCTAAGGTTGAAGCCATCATAGGTAGGAATGATGAAGCTATCATGAACTTTGAAAAGGCTCGGTTAATTGATCCAAACATCATGACATATATGGATGAGTATGCAATTCTCCTTAAGTCAAAATCTGACTACACAAAGCTTAACAAGTTGGTACATGATATGCTGCATATTGACCCTGCAAGACCAGAAACATGTCTTGCTCTTGCAGCATTGTGGGAAAGAAAAGATGAAAGAAAAGCTTTGACATATGCTGAAAAGAGTCTCCGAGTTGATGATAGACATATAACTGGATATATCATGAAGGGAAATCTTCATCTTTTGTTGAATCGACCTGATTTGGCAGTCACAGACTTCAGGGGAGCTCAAGAACTTAGGGCCGATCTTCGCTCTTATCAAGGATTGGTACGTGCTTATCTAGCGCTCTCTAAATGCAAAGATGCATTATTCACTGCACGTGAAGCAATGAAGGTTATGCATCAGTCTGCAAAAGCTCTCAAATTAGTTGGTGATGTGCATGCTATCAGTTCCAGTGGGAGAGAGAAGGCTAGGAAGTTCTATGAATCCGCCATTCGTCTTGAACCTGGATTTCTGGGAGCTGCATTGGCTTTGGCTGATCTGCATGTCGCTGAAGGACGAAATAAGGATGCAGTATTGCTGCTTGAAAGATATCTAAGACAGTGGACAGATGATTCTCTACACATCAAGTTGGCTCAAGTTTTTGCAGCAACGAATATGCTTTCTGATGCACTTTCCCACTACCAATCTGCTCTAAGGATAAACCCACATAATGAGGCCGCAAAGAAAGGATTGGAACGCTTAGAGAAGCAAATGAAGGGAGTAGACCCGGACGCGCCTGAAGAGGACGAAGAGAACGAAGCTGACGATGTCGACGGTGATCAAGACGACGCTGAACTACTGTAGAAAAAACCTGATCAACTCACATCAACCCAAGGCACCACCTCTTACCAAGCGTCAACTGCGAAAGAGGACCAAATCTGCAGCCGCTGCCACAGCAGGAGAGCCCCTCAATTGCCATATATCAACTAGCAACTTGGAAGGCACGGCAACTGGAAGACGAGTGACGACGACGGGTGCCTCTCCCTTACCGCGAGTAAGTTTTCTTGCTAACGCGAAACCTCGTCGTAGAGTTGCAATGCTCACCGTAGGTTTATTTTTCTAATGCTGGGGAAATGTGAACTGAACTTGTTGGTTTCAAGTCAAACTTTATTACTACCTCTGTCCTAACATATAGCAACTTAGTACCCAACAGTCCAAATTCCTGGTATCTAGGATGTCTCATTTGATATTAGGGTGCTATATTTTGAGACGGGGTAGTAGTTAATTTGCTCTCCATGTATTATTGTTTTTTACATTATTGTGTTATATATCATGGCGACAAAAAAGGGGC]
[+] EMBL AK101105 [CAAATCTCCGAACCACAAATTCCAATTCAAAAACTTTTTCCCCGAGTAGCCTCGCCGTCGCCGTCGCCGGAGATGGAGGCGGCGCGGGAGTCAATGGCGGCGCTCGTCGACGCCGGCCTCTACGACTGCGCCCAGACGCTCGGGTGCTTTCTTGTGTCTTCATCACCTGCGAGCAGCGAGGCTGGTATGTCCATGAAGGTGGAAAGCTTGGTACTGCATGGTGATGCTTTGCATGGAGAGAAAGAATTTCGCAGGGCACTGAGTGCCTACAAACAAGCTATGCAATACAGCAAAAACATTCCTAGGCAAGCAACAAGTAATACTAGAAGCTCAGTAACTGCCACTGGCCGGTCTCCTTCTCCAAATTCTTCAAGTCTTGCACCACTCAATGAAAATGAGGTGAAATTTAAAATTGCACTTTGCTATTCTGCTCTACGTGAGCATCGTGAAGCACTTCAAGAGATGGAAGGGATTCCTTCTAAAGCGAGGACTCTAAAAATGAATCTGATGTTAGGGAAGCTATATCGGATATCCAGAAATAATCGTGCAGCTGCTGTATGTTATAAAGAGTGCCTGAGGCAATGCCCTTATGTTTTTGAGGCTATTACAGCTTTGGCTGAAATGGGGCTTTCTTCAAAGGAGTTCTCTTTGATATTCTCACAAGCACCAAATCGAGGAGGCAAGGCTCCAGGTGACTCTTTAGATGCACAGCGTTGGTGGAACCGCTATGTTGAGGCCCAATGTTGCATTGCTTCACATGATTATAAAGGTGGCCTTGACATATATCTAGACTTAATGCAGCGATTCCCGAACAATGTGCACATCTTGCTGGAAATTGCTAAGGTTGAAGCCATCATAGGTAGGAATGATGAAGCTATCATGAACTTTGAAAAGGCTCGGTTAATTGATCCAAACATCATGACATATATGGATGAGTATGCAATTCTCCTTAAGTCAAAATCTGACTACACAAAGCTTAACAAGTTGGTACATGATATGCTGCATATTGACCCTGCAAGACCAGAAACATGTCTTGCTCTTGCAGCATTGTGGGAAAGAAAAGATGAAAGAAAAGCTTTGACATATGCTGAAAAGAGTCTCCGAGTTGATGATAGACATATAACTGGATATATCATGAAGGGAAATCTTCATCTTTTGTTGAATCGACCTGATTTGGCAGTCACAGACTTCAGGGGAGCTCAAGAACTTAGGGCCGATCTTCGCTCTTATCAAGGATTGGTACGTGCTTATCTAGCGCTCTCTAAATGCAAAGATGCATTATTCACTGCACGTGAAGCAATGAAGGTTATGCATCAGTCTGCAAAAGCTCTCAAATTAGTTGGTGATGTGCATGCTATCAGTTCCAGTGGGAGAGAGAAGGCTAGGAAGTTCTATGAATCCGCCATTCGTCTTGAACCTGGATTTCTGGGAGCTGCATTGGCTTTGGCTGATCTGCATGTCGCTGAAGGACGAAATAAGGATGCAGTATTGCTGCTTGAAAGATATCTAAGACAGTGGACAGATGATTCTCTACACATCAAGTTGGCTCAAGTTTTTGCAGCAACGAATATGCTTTCTGATGCACTTTCCCACTACCAATCTGCTCTAAGGATAAACCCACATAATGAGGCCGCAAAGAAAGGATTGGAACGCTTAGAGAAGCAAATGAAGGGAGTAGACCCGGACGCGCCTGAAGAGGACGAAGAGAACGAAGCTGACGATGTCGACGGTGATCAAGACGACGCTGAACTACTGTAGAAAAAACCTGATCAACTCACATCAACCCAAGGCACCACCTCTTACCAAGCGTCAACTGCGAAAGAGGACCAAATCTGCAGCCGCTGCCACAGCAGGAGAGCCCCTCAATTGCCATATATCAACTAGCAACTTGGAAGGCACGGCAACTGGAAGACGAGTGACGACGACGGGTGCCTCTCCCTTACCGCGAGTAAGTTTTCTTGCTAACGCGAAACCTCGTCGTAGAGTTGCAATGCTCACCGTAGGTTTATTTTTCTAATGCTGGGGAAATGTGAACTGAACTTGTTGGTTTCAAGTCAAACTTTATTACTACCTCTGTCCTAACATATAGCAACTTAGTACCCAACAGTCCAAATTCCTGGTATCTAGGATGTCTCATTTGATATTAGGGTGCTATATTTTGAGACGGGGTAGTAGTTAATTTGCTCTCCATGTATTATTGTTTTTTACATTATTGTGTTATATATCATGGCGACAAAAAAGGGGC]
[+] EMBL AK072901 [ ATCTCCGAACCACAAATTCCAATTCAAAAACTTTTTCCCCGAGTAGCCTCGCCGTCGCCGTCGCCGGAGATGGAGGCGGCGCGGGAGTCAATGGCGGCGCTCGTCGACGCCGGCCTCTACGACTGCGCCCAGACGCTCGGGTGCTTTCTTGTGTCTTCATCACCTGCGAGCAGCGAGGCTGGTATGTCCATGAAGGTGGAAAGCTTGGTACTGCATGGTGATGCTTTGCATGGAGAGAAAGAATTTCGCAGGGCACTGAGTGCCTACAAACAAGCTATGCAATACAGCAAAAACATTCCTAGGCAAGCAACAAGTAATACTAGAAGCTCAGTAACTGCCACTGGCCGGTCTCCTTCTCCAAATTCTTCAAGTCTTGCACCACTCAATGAAAATGAGGTGAAATTTAAAATTGCACTTTGCTATTCTGCTCTACGTGAGCATCGTGAAGCACTTCAAGAGATGGAAGGGATTCCTTCTAAAGCGAGGACTCTAAAAATGAATCTGATGTTAGGGAAGCTATATCGGATATCCAGAAATAATCGTGCAGCTGCTGTATGTTATAAAGAGTGCCTGAGGCAATGCCCTTATGTTTTTGAGGCTATTACAGCTTTGGCTGAAATGGGGCTTTCTTCAAAGGAGTTCTCTTTGATATTCTCACAAGCACCAAATCGAGGAGGCAAGGCTCCAGGTGACTCTTTAGATGCACAGCGTTGGTGGAACCGCTATGTTGAGGCCCAATGTTGCATTGCTTCACATGATTATAAAGGTGGCCTTGACATATATCTAGACTTAATGCAGCGATTCCCGAACAATGTGCACATCTTGCTGGAAATTGCTAAGGTTGAAGCCATCATAGGTAGGAATGATGAAGCTATCATGAACTTTGAAAAGGCTCGGTTAATTGATCCAAACATCATGACATATATGGATGAGTATGCAATTCTCCTTAAGTCAAAATCTGACTACACAAAGCTTAACAAGTTGGTACATGATATGCTGCATATTGACCCTGCAAGACCAGAAACATGTCTTGCTCTTGCA ]
[+] EMBL AK105677 [ AACCACAAATTCCAATTCAAAAACTTTTTCCCCGAGTAGCCTCGCCGTCGCCGTCGCCGGAGATGGAGGCGGCGCGGGAGTCAATGGCGGCGCTCGTCGACGCCGGCCTCTACGACTGCGCCCAGACGCTCGGGTGCTTTCTTGTGTCTTCATCACCTGCGAGCAGCGAGGCTGGTATGTCCATGAAGGTGGAAAGCTTGGCACTGCATGGTGATGCTTTGCATGGAGAGAAAGAATTTCGCAGGGCACTGAGTGCCTACAAACAAGCTATGCAATACAGCAAAAACATTCCTAGGCAAGCAACAAGTAATACTAGAAGCTCAGTAACTGCCACTGGCCGGTCTCCTTCTCCAAATTCTTCAAGTCCTGCACCACTCAATGAAAATGAGGTGAGATTTAAAATTGCACTTTGCTATTCTGCTCTACGTGAGCATCGTGAAGCACTTCAAGAGATGGAAGGGATTCCTTCTAAAGCGAGGACTCTAAAAATGAATCTGATGTTAGGGAAGCTATATCGGATATCCAGAAATAATCGTGCAGCTGCTGTATGTTATAAAGAGTGCCTGAGGCAATGCCCTTATGTTTTTGAGGCTATTACAGCTTTGGCTGAAATGGGGCTTTCTTCAAAGGAGTTCTCTTTGATATTCTCACAAGCACCAAATCGAGGAGGCAAGGCTCCAGGTGACTCTTTAGATGCACAGCGTTGGTGGAACCGCTATGTTGAGGCCCAATGTTGCATTGCTTCACATGATTATAAAGGTGGCCTTGACATATATCTAGACTTAATGCAGCGATTCCCGAACAATGTGCACATCTTGCTGGAAATTGCTAAGGTTGAAGCCATCATAGGTAGGAATGATGAAGCTATCATGAACTTTGAAAAGGCTCGGTTAATTGATCCAAACATCATGACATATATGGATGAGTATGCAATTCTCCTTAAGTCAAAATCTGACTACACAAAGCTTAACAAGTTGGTACATGATATGCTGCATATTGACCCTGCAAGACCAGAAACATGTCTTGCTCTTGCAGCATTGTGGGAAAGAAAAGATGAAAGAAAAGCTTTGACATATGCTGAAAAGAGTCTCCGAGTTGATGATAGACATATAACTGGATATATCATGAAGGGAAATCTTCATCTTTTGTTGAATCGACCTGATTTGGCAGTCACAGACTTCAGGGGAGCTCAAGAACTTAGGGCCGATCTTCGCTCTTATCAAGGATTGGTACGTGCTTATCTAGCGCTCTCTAAATGCAAAGATGCATTATTCACTGCACGTGAAGCAATGAAGGTTATGCATCAGTCTGCAAAAGCTCTCAAATTAGTTGGTGATGTGCATGCTATCAGTTCCAGTGGGAGAGAGAAGGCTAGGAAGTTCTATGAATCCGCCATTCGTCTTGAACCTGGATTTCTGGGAGCTGCATTGGCTTTGGCTGATCTGCATGTCGCTGAAGGACGAAATAAGGATGCAGTATTGCTGCTTGAAAGATATCTAAGACAGTGGACAGATGATTCTCTACACATCAAGTTGGCTCAAGTTTTTGCAGCAACGAATATGCTTTCTGATGCACTTTCCCACTACCAATCTGCTCTAAGGATAAACCCACATAATGAGGCCGCAAAGAAAGGATTGGAACGCTTAGAGAAGCAAATGAAGGGAGTAGACCCGGACGCGCCTGAAGAGGACGAAGAGAACGAAGCTGACGATGTCGACGGTGATCAAGACGACGCTGAACTACTGTAGAAAAAACCTGATCAACTCACATCAACCCAAGGCACCACCTCTTACCAAGCGTCAACTGCGAAAGAGGACCAAATCTGCAGCCGCTGCCACAGCAGGAGAGCCCCTCAATTGCCATATATCAACTAGCAACTTGGAAGGCACGGCAACTGGAAGACGAGTGACGACGACGGGTGCCTCTCCCTTACCGCGAGTAAGTTTTCTTGCTAACGCGAAACCTCGTCGTAGAGTTGCAATGCTCACCGTAGGTTTATTTTTCTAATGCTGGGGAAATGTGAACTGAACTTGTTGGTTTCTAGTCAAACTTTATTACTACCTCTGTCCTAACATATAGCAACTTAGTACCCAACAGTCCAAATTCCTGGTATCTAGGATGTCTCATTTGATATTAGGGTGCTATATTTTGAGACGGGGTAGTAGTTA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8103#0 -------------------------------------TTCCCCGAGTAGCCTCGCCGTCG 23
consensus_8103#1 CAAATCTCCGAACCACAAATTCCAATTCAAAAACTTTTTCCCCGAGTAGCCTCGCCGTCG 60
***********************
consensus_8103#0 CCGTCGCCGGAGATGGAGGCGGCGCGGGAGTCAATGGCGGCGCTCGTCGACGCCGGCCTC 83
consensus_8103#1 CCGTCGCCGGAGATGGAGGCGGCGCGGGAGTCAATGGCGGCGCTCGTCGACGCCGGCCTC 120
************************************************************
consensus_8103#0 TACGACTGCGCCCAGACGCTCGGGTGCTTTCTTGTGTCTTCATCACCTGCGAGCAGCGAG 143
consensus_8103#1 TACGACTGCGCCCAGACGCTCGGGTGCTTTCTTGTGTCTTCATCACCTGCGAGCAGCGAG 180
************************************************************
consensus_8103#0 GCTGGTATGTCCATGAAGGTGGAAAGCTTGGTACTGCATGGTGATGCTTTGCGTGGAGAG 203
consensus_8103#1 GCTGGTATGTCCATGAAGGTGGAAAGCTTGGTACTGCATGGTGATGCTTTGCATGGAGAG 240
**************************************************** *******
consensus_8103#0 AAAGAATTTCGCAGGGCACTGAGTGCCTACAAACAAGCTATGCAATACAGCAAAAACATT 263
consensus_8103#1 AAAGAATTTCGCAGGGCACTGAGTGCCTACAAACAAGCTATGCAATACAGCAAAAACATT 300
************************************************************
consensus_8103#0 CCTGGGCAAGCAACAAGTAATACTAGAAGCTCAGTAACTGCCACTGGCCGGTCTCCTTCT 323
consensus_8103#1 CCTAGGCAAGCAACAAGTAATACTAGAAGCTCAGTAACTGCCACTGGCCGGTCTCCTTCT 360
*** ********************************************************
consensus_8103#0 CCAAATTCTTCAAGTCTTGCACCACTCAATGAAAATGAGGTGAAATTTAAAATTGCACTT 383
consensus_8103#1 CCAAATTCTTCAAGTCTTGCACCACTCAATGAAAATGAGGTGAAATTTAAAATTGCACTT 420
************************************************************
consensus_8103#0 TGCTATTCTGCTCTACGTGAGCATCGTGAAGCACTTCAAGAGGATGACTCGGACTCACTT 443
consensus_8103#1 TGCTATTCTGCTCTACGTGAGCATCGTGAAGCACTTCAAGAG------------------ 462
******************************************
consensus_8103#0 GTGGTAGCTTCTTCTGTATGATGGAAGACATATGATGCAAAACATGGCCTCTATGTTGCC 503
consensus_8103#1 ------------------------------------------------------------
consensus_8103#0 TGCAGATGGAAGGGATTCCTTCTAAAGCGAGGACTCTAAAAATGAATCTGATGTTAGGGA 563
consensus_8103#1 -----ATGGAAGGGATTCCTTCTAAAGCGAGGACTCTAAAAATGAATCTGATGTTAGGGA 517
*******************************************************
consensus_8103#0 AGCTATATCGGATATCCAGAAATAATCGTGCAGCTGCTGTATGTTATAAAGAGTGCCTGA 623
consensus_8103#1 AGCTATATCGGATATCCAGAAATAATCGTGCAGCTGCTGTATGTTATAAAGAGTGCCTGA 577
************************************************************
consensus_8103#0 GGCAATGCCCTTATGTTTTTGAGGCTATTACAGCTTTGGCTGAAATGGGGCTTTCTTCAA 683
consensus_8103#1 GGCAATGCCCTTATGTTTTTGAGGCTATTACAGCTTTGGCTGAAATGGGGCTTTCTTCAA 637
************************************************************
consensus_8103#0 AGGAGTTCTCTTTGATATTCTCACAAGCACCAAATCGAGGAGGCAAGGCTCCAGGTGACT 743
consensus_8103#1 AGGAGTTCTCTTTGATATTCTCACAAGCACCAAATCGAGGAGGCAAGGCTCCAGGTGACT 697
************************************************************
consensus_8103#0 CTTTAGATGCACAGCGTTGGTGGAACCGCTATGTTGAGGCCCAATGTTGCATTGCTTCAC 803
consensus_8103#1 CTTTAGATGCACAGCGTTGGTGGAACCGCTATGTTGAGGCCCAATGTTGCATTGCTTCAC 757
************************************************************
consensus_8103#0 ATGATTATAAAGGTGGCCTTGACATATATCTAGACTTAATGCAGCGATTCCCGAACAATG 863
consensus_8103#1 ATGATTATAAAGGTGGCCTTGACATATATCTAGACTTAATGCAGCGATTCCCGAACAATG 817
************************************************************
consensus_8103#0 TGCACATCTTGCTGGAAATTGCTAAGGTTGAAGCCATCATAGGTAGGAATGATGAAGCTA 923
consensus_8103#1 TGCACATCTTGCTGGAAATTGCTAAGGTTGAAGCCATCATAGGTAGGAATGATGAAGCTA 877
************************************************************
consensus_8103#0 TCATGAACTTTGAAAAGGCTCGGTTAATTGATCCAAACATCATGACATATATGGATGAGT 983
consensus_8103#1 TCATGAACTTTGAAAAGGCTCGGTTAATTGATCCAAACATCATGACATATATGGATGAGT 937
************************************************************
consensus_8103#0 ATGCAATTCTCCTTAAGTCAAAATCTGACTACACAAAGCTTAACAAGTTGGTACATGATA 1043
consensus_8103#1 ATGCAATTCTCCTTAAGTCAAAATCTGACTACACAAAGCTTAACAAGTTGGTACATGATA 997
************************************************************
consensus_8103#0 TGCTGCATATTGACCCTGCAAGACCAGAAACATGTCTTGCTCTTGCAGCATTGTGGGAAA 1103
consensus_8103#1 TGCTGCATATTGACCCTGCAAGACCAGAAACATGTCTTGCTCTTGCAGCATTGTGGGAAA 1057
************************************************************
consensus_8103#0 GAAAAGATGAAAGAAAAGCTTTGACATATGCTGAAAAGAGTCTCCGAGTTGATGATAGAC 1163
consensus_8103#1 GAAAAGATGAAAGAAAAGCTTTGACATATGCTGAAAAGAGTCTCCGAGTTGATGATAGAC 1117
************************************************************
consensus_8103#0 ATATAACTGGATATATCATGAAGGGAAATCTTCATCTTTTGTTGAATCGACCTGATTTGG 1223
consensus_8103#1 ATATAACTGGATATATCATGAAGGGAAATCTTCATCTTTTGTTGAATCGACCTGATTTGG 1177
************************************************************
consensus_8103#0 CAGTCACAGACTTCAGGGGAGCTCAAGAACTTAGGGCCGATCTTCGCTCTTATCAAGGAT 1283
consensus_8103#1 CAGTCACAGACTTCAGGGGAGCTCAAGAACTTAGGGCCGATCTTCGCTCTTATCAAGGAT 1237
************************************************************
consensus_8103#0 TGGTACGTGCTTATCTAGCGCTCTCTAAATGCAAAGATGCATTATTCACTGCACGTGAAG 1343
consensus_8103#1 TGGTACGTGCTTATCTAGCGCTCTCTAAATGCAAAGATGCATTATTCACTGCACGTGAAG 1297
************************************************************
consensus_8103#0 CAATGAAGGTTATGCATCAGTCTGCAAAAGCTCTCAAATTAGTTGGTGATGTGCATGCTA 1403
consensus_8103#1 CAATGAAGGTTATGCATCAGTCTGCAAAAGCTCTCAAATTAGTTGGTGATGTGCATGCTA 1357
************************************************************
consensus_8103#0 TCAGTTCCAGTGGGAGAGAGAAGGCTAGGAAGTTCTATGAATCCGCCATTCGTCTTGAAC 1463
consensus_8103#1 TCAGTTCCAGTGGGAGAGAGAAGGCTAGGAAGTTCTATGAATCCGCCATTCGTCTTGAAC 1417
************************************************************
consensus_8103#0 CTGGATTTCTGGGAGCTGCATTGGCTTTGGCTGATCTGCATGTCGCTGAAGGACGAAATA 1523
consensus_8103#1 CTGGATTTCTGGGAGCTGCATTGGCTTTGGCTGATCTGCATGTCGCTGAAGGACGAAATA 1477
************************************************************
consensus_8103#0 AGGATGCAGTATTGCTGCTTGAAAGATATCTAAGACAGTGGACAGATGATTCTCTACACA 1583
consensus_8103#1 AGGATGCAGTATTGCTGCTTGAAAGATATCTAAGACAGTGGACAGATGATTCTCTACACA 1537
************************************************************
consensus_8103#0 TCAAGTTGGCTCAAGTTTTTGCAGCAACGAATATGCTTTCTGATGCACTTTCCCACTACC 1643
consensus_8103#1 TCAAGTTGGCTCAAGTTTTTGCAGCAACGAATATGCTTTCTGATGCACTTTCCCACTACC 1597
************************************************************
consensus_8103#0 AATCTGCTCTAAGGATAAACCCACATAATGAGGCCGCAAAGAAAGGATTGGAACGCTTAG 1703
consensus_8103#1 AATCTGCTCTAAGGATAAACCCACATAATGAGGCCGCAAAGAAAGGATTGGAACGCTTAG 1657
************************************************************
consensus_8103#0 AGAAGCAAATGAAGGGAGTAGACCCGGACGCGCCTGAAGAGGACGAAGAGAACGAAGCTG 1763
consensus_8103#1 AGAAGCAAATGAAGGGAGTAGACCCGGACGCGCCTGAAGAGGACGAAGAGAACGAAGCTG 1717
************************************************************
consensus_8103#0 ACGATGTCGACGGTGATCAAGACGACGCTGAACTACTGTAGAAAAAACCTGATCAACTCA 1823
consensus_8103#1 ACGATGTCGACGGTGATCAAGACGACGCTGAACTACTGTAGAAAAAACCTGATCAACTCA 1777
************************************************************
consensus_8103#0 CATCAACCCAAGGCACCACCTCTTACCAAGCGTCAACTGCGAAAGAGGACCAAATCTGCA 1883
consensus_8103#1 CATCAACCCAAGGCACCACCTCTTACCAAGCGTCAACTGCGAAAGAGGACCAAATCTGCA 1837
************************************************************
consensus_8103#0 GCCGCTGCCACAGCAGGAGAGCCCCTCAATTGCCATATATCAACTAGCAACTTGGAAGGC 1943
consensus_8103#1 GCCGCTGCCACAGCAGGAGAGCCCCTCAATTGCCATATATCAACTAGCAACTTGGAAGGC 1897
************************************************************
consensus_8103#0 ACGGCAACTGGAAGACGAGTGACGACGACGGGTGCCTCTCCCTTACCGCGATGATCAGAT 2003
consensus_8103#1 ACGGCAACTGGAAGACGAGTGACGACGACGGGTGCCTCTCCCTTACCGCGA--GTAAGTT 1955
*************************************************** * ** *
consensus_8103#0 ACGTGCGGTATGTATAAGTACGGCG----ATTCTACCACGCACAGT-GGTACATACGTAT 2058
consensus_8103#1 TTCTTGCTAACGCGAAACCTCGTCGTAGAGTTGCAATGCTCACCGTAGGTTTATTTTTCT 2015
* * * ** ** ** ** * * *** ** *** ** * *
consensus_8103#0 ACGTACACTAGCCAGCAGCTGGAGCTGGCTGGCTTCTCTACTACACTGGCATGCAGCTTG 2118
consensus_8103#1 AATGCTGGGGAAATGTGAACTGAACTTGTTGGTTTCAAGTCAAACTTTATTACTACCTCT 2075
* * ** ** * *** *** * * * * **
consensus_8103#0 GTG-TGGCAGGCTACA-CCCAGAGCGCGCCGGC----GTCGTGGAGGAGCGGGACAAGGC 2172
consensus_8103#1 GTCCTAACATATAGCAACTTAGTACCCAACAGTCCAAATTCCTGGTATCTAGGATGTCTC 2135
** * ** ** * ** * * * * * * *** *
consensus_8103#0 CGCCGGCGACGTGGAGCGACATGACCCGGTCGGT--GGAGCCGACGAGCCTGCCGCCGAT 2230
consensus_8103#1 ATTTGATATTAGGGTGCTATATTTTGAGACGGGGTAGTAGTTAATTTGCTCTCCATGTAT 2195
* ** ** * ** * ** * ** * ** ** **
consensus_8103#0 GAACACTGTCGGCACCACGACGCCGCG-GCCGCGGCCACCGCCGTTGGCGGCGGTGCCGG 2289
consensus_8103#1 TATTGTTTTTTACATTATTGTGTTATATATCATGGCGACAAAAA--AGGGGC-------- 2245
* * * ** * * * *** ** * ***
consensus_8103#0 CGAGCAACATCCCGGCGAGCGCGTTCTCCATGTCGGCGCCGGCGGGCTCCTCGTCGAGCT 2349
consensus_8103#1 ------------------------------------------------------------
consensus_8103#0 CCACCACGCGGGCGTCGACGCCGAGCTCCCGGAGCAGGCGCGTCACGGCGTGGGACATGC 2409
consensus_8103#1 ------------------------------------------------------------
consensus_8103#0 CGCACGAGCTCTTGCTGAACACCACCACCGCCTTCTGCGACGCCAGCCTTGTCACCCTGT 2469
consensus_8103#1 ------------------------------------------------------------
consensus_8103#0 CCATCTCTATATATGCAAATGTCTATGTGCCTAGTGTCTTCTTCCCCGTCTCCGGCGACT 2529
consensus_8103#1 ------------------------------------------------------------
consensus_8103#0 ACGACCTGGCCGCGGAATGCGCCGGGATCTTTGGCTGGATGGATGTCACCGGCGGTGATC 2589
consensus_8103#1 ------------------------------------------------------------
consensus_8103#0 GCCCGATCGATCGAGGTTGTGTCACTTGTTAGTGATGCTGATCTGCTGGTTGTGCTTGCA 2649
consensus_8103#1 ------------------------------------------------------------
consensus_8103#0 TTTGAGAGGTTAGGGAAGGCATGCTTATATAGTGTTCTTATGCATGTTGGCGAAATGGTA 2709
consensus_8103#1 ------------------------------------------------------------
consensus_8103#0 TATCGCGCGTGCAAATGCTGGGTGAAGATGGAGTTAAAGAATCTTCAGAGGAATAATTAA 2769
consensus_8103#1 ------------------------------------------------------------
consensus_8103#0 AGGCGATCGATCGATTTATGCATTTCTGCGGGTTTTTTTTTTCTTCTCTCTCTCTCTTTT 2829
consensus_8103#1 ------------------------------------------------------------
consensus_8103#0 GGTTTTGGGATAATGCTTGGCACCATTTCTGGGTTGTGAAAAAGATGAGCTGATAGATAG 2889
consensus_8103#1 ------------------------------------------------------------
consensus_8103#0 GTTGGTAAGGAATATGGAACATTTTG 2915
consensus_8103#1 --------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||