cluster # 8106

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8106 cluster # 8106 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8106#0 length = 1314 sequences # 5
consensusID : consensus_8106#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1314
fasta sequence
                              [CTCTATATTTTTCGCTGCAACTTTAGGGTTGGCCTGTTTGCCTTACACCGAAGTACAACAGTAGTGACATGTTTCTCGAAGCACCAAAATTTACTTTACAGGTAAAGAGGCGGAAAGAACGGCAATCCCACCAGCTCACTTTAATGAACTTAAATGTCCAAAGAGTAACTATAACCTCGGAGAAGAAACCCCACGCTTTCTTGCAGCAAACTTAAAACCAAGGGGAGCAAAGGCCAAAAGGGGCAAAAAAAAAAATTGGAACAAGCGTGGACCCTCGTCTCTAACTGAATGGTCAGTTCCAGCTACATATAATACCACAGAAATAAGCGCTAGACCATTTGGGAATCTGCAACATTTCCTTGCAGATCATCCATGCTTGATATATACACTCTTGATCAGGCACCTCTATGCTGAAAGCCCAAAAAAAACTTCCTTTGCCAACACTTAGATATCCAAC-AAATAACTGTTCTTTTTCATCCTATGATGGCTACTCGGAAAAATATACTACCTCCGTTAATAATTAGGCCAGTTCATCTGAGCCCGTTGTGGCTGCTGATAACCATTGGCAGGTGGTCCAACCATTTCACCACCAACCCCAGCAATGGCCTGAGGTGGCTGTAGTAGTGGATGAACAGCGGCTCCAGCCATTGTCTGTGCCGGGTGATATATCCCTCC-AAAAGTACCATGACCAGCTTGAGCAGGGGCAAACGCCAGGTGCTGTCCCTGCAGAGGCAGTCCGTAATAGTTGCTAGGCTGGAGACCAGAAATATCACGTCCTGGGGCAGGAATCCAGACACCGGAGCCTTCGCTCTGCTGCCCGGCAATATAGACATTGGTTTCTTTGAATTGGGATCCACTGATATCATCACTCTCGACAGAAGTTCCACTTGCCACCATAGTGTTATTTGTATAGATTGACGGACTAGAATCATATGTTCCATATGCACCATGGTTTCCAACATGTGTCTGGGTTCCATTGTTAGCACCAGGCTTGTATGTATTGGTTGGGTATTTACCTGGTGGTGCAACAGCTGCACTTACAGGTGGATACATGCCTCCGGTTGAAGGGGGTTGAGGAACCATGAAATGAAGGGGTTGTGGTGGAACATAGAGTGGATACTGACTGTATGGGAAATAATTTGGTGGGTATTGAGGTAAAACACCTAAATGCTGGCGGAATAATTGAAGTGGCTGTTGTGGAATACCAACAGAATTTGGTACGGCTCCAGGGGTTGGGGTGGCAAGTGGAGTAGACCCAACTGAAGGCAGCACGAAGGAGTTGATTCCCTCTTGGGCATGCCCAGTTTGTGTGGG]

[+] EMBL CB632218             [CTCTATATTTTTCGCTGCAACTTTAGGGTTGGCCTGTTTGCCTTACACCGAAGTACAACAGTAGTGACATGTTTCTCGAAGCACCAAAATTTACTTTACAGGTAAAGAGGCGGAAAGAACGGCAATCCCACCAGCTCACTTTAATGAACTTAAATGTCCAAAGAGTAACTATAACCTCGGAGAAGAAACCCCACGCTTTCTTGCAGCAAACTTAAAACCAAGGGGAGCAAAGGCCAAAAGGGGCAAAAAAAAAAATTGGAACAAGCGTGGACCCTCGTCTCTAACTGAATGGTCAGTTCCAGCTACATATAATACCACAGAAATAAGCGCTAGACCATTTGGGAATCTGCAACATTTCCTTGCAGATCATCCATGCTTGATATATACACTCTTGATCAGGCACCTCTATGCTGAAAGCCCAAAAAAAACTTCCTTTGCCAACACTTAGATATCCAAC AAATAACTGTTCTTTTTCATCCTATGATGGCTACTCGGAAAAATATACTACCTCCGTTAATAATTAGGCCAGTTCATCTGAGCCCGTTGTGGCTGCTGATAACCATTGGCAGGTGGTCCAACCATTTCACCACCAACCCCAGCAATGGCCTGAGGTGGCTGTAGTAGTGGATGAACAGCGGCTCCAGCCATTGTCTGTGCCGGGTGATATATCCCTCCAAAAAGTACCATGACCAGCTTGAGCAGGGGCAAACGCCAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB632219             [                     TTTAGGGTTGGCCTGTTTGTATTACACCGAAGTACAACAGTAGTGACATGTTTCTCGAAGCACCAAAATTTACTTTACAGGTAAAGAGGCGGAAAGAACGGCAATCCCACCAGCTCACTTTAATGAACTTAAATGTCCAAAGAGTAACTATAACCTCGGAGAAGAAACCCCACGCTTTCTTGCAGCAAACTTAAAACCAAGGGGAGCAAAGGCCAAAAGGGGCAAAAAAAAAAATTGGAACAAGCGTGGACCCTCGTCTCTAACTGAATGGTCAGTTCCAGCTACATATAATACCACAGAAATAAGCGCTAGACCATTTGGGAATCTGCAACATTTCCTTGCAGATCATCCATGCTTGATATATACACTCTTGATCAGGCACCTCTATGCTGAAAGCCCAAAAAAAACTTCCTTTGCCAACACTTAGATATCCAAC AAATAACTGTTCTTTTTCATCCTATGATGGCTACTCGGAAAAATATACTACCTCCGTTAATAATTAGGCCAGTTCATCTGAGCCCGTTGTGGCTGCTGATAACCATTGGCAGGTGGTCCAACCATTTCACCACCAACCCCAGCAATGGCCTGAGGTGGCTGTAGTAGTGGATGAACAGCGGCTCCAGCCATTGTCTGTGCCGGGTGATATATCCCTCC AAAAGTACCATGACCAGCTTGAGCAGGGGCAAACGCCAGGTGCTGTCCCTGCAGAGGCAGTCCGTAATAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB654049             [                                                                                                                                                                                                                                                                                           ACTGAATGGTCAGTTCCAGCTACATATAATACCACATAAATAAGCGCTAGACCATTTGGGAATCTGCAACATTTCCTTGCAGATCATCCATGCTTGATATATACACTCTTGATCAGGCACCTCTATGCTGAAAGCCCAAAAAAAACTTCCTTTGCCAACACTTAGATATCCAAC AAATAACTGTTCTTTTTCATCCTATGATGGCTACTCGGAAAAATATACTACCTCCGTTAATAATTAGGCCAGTTCATCTGAGCCCGTTGTGGCTGCTGATAACCATTGGCAGGTGGTCCAACCATTTCACCACCAACCCCAGCAATGGCCTGAGGTGGCTGTAGTAGTGGATGAACAGCGGCTCCAGCCATTGTCTGTGCCGGGTGATATATCCCTCC AAAAGTACCATGACCAGCTTGAGCAGGGGCAAACGCCAGGTGCTGTCCCTGCAGAGGCAGTCCGTAATAGTTGCTAGGCTGGAGACCAGAAATATCACGTCCTGGGGCAGGAATCCAGACACCGGAGCCTTCGCTCTGCTGCCCGGCAATATAGACATTGGTTTCTTTGAATTGGGATCCACTGATATCATCACTCTCGACAGAAGTTCCACTTGCCACCATAGTGTTATTTGTATAGATTGACGGACTAGAATCATATGTTCCATATGCACCATGGTTTCCAACATGTGTCTGGGTTCCATTGTTAGCACCAGGCTTGTATGTATTGGTTGGGTATTTACCTGGTGGTGCAACAGCTGCACTTACAGGTGGATACATGCCTCCGGTTGAAGGGGGTTGAGGAACCATGAAATGAAGGGGTTGTGGTGGAACATAGAGTGGATA                                                                                                                                                                                                   ]
[-] EMBL AU066127             [                                                                                                                                                                                                                                                                                                                                                                                 nCCATGC TGATATATACAC NTTGAT AGGCNCCTTTATGCTGAAAGCCCAAAAAAAACTTCCTTTGCCAANACTTAGATATCCAACAAAATAACTGTTCTTTTTCATCCTATGATGGCTACTCGGAAAAATATACTACCNCCGTTAATAATTAGGCCAGTTCATCTGAGCCCGTTGTGGCTGCTGATAACCATTGGCAGGTGGTCCAACCATTTCACCACCAACCCCAGCAATGGCCTGAGGTGGCTGTAGTAGTGGATGAACAGCGGCTCCAGCCATTGTCTGTGCCGGGTGATATATCCCTCC AAAAGTACCATGACCAGCTTGAGCAGGGGCAAACGCCAGGTGCTGTCCCTGCAGAGGCAGTCCGTAATAGTTGCTAGGCTGGAGACCAGAAATATCACGTCCTGGGGCAGGAATCCAGACACCGGAGCCTTCGCTCTGCTGCCCGGCAATATAGACATTGGTTTCTTTGAATTGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CA999313             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGGGCAAACGCCAGGTGCTGTCCCTGCAGAGGCAGTCCGTAATAGTTGCTAGGCTGGAGACCAGAAATATCACGTCCTGGGGCAGGAATCCAGACACCGGAGCCTTCGCTCTGCTGCCCGGCAATATAGACATTGGTTTCTTTGAATTGGGATCCACTGATATCATCACTCTCGACAGAAGTTCCACTTGCCACCATAGTGTTATTTGTATAGATTGACGGACTAGAATCATATGTTCCATATGCACCATGGTTTCCAACATGTGTCTGGGTTCCATTGTTAGCACCAGGCTTGTATGTATTGGTTGGGTATTTACCTGGTGGTGCAACAGCTGCACTTACAGGTGGATACATGCCTCCGGTTGAAGGGGGTTGAGGAACCATGAAATGAAGGGGTTGTGGTGGAACATAGAGTGGATACTGACTGTATGGGAAATAATTTGGTGGGTATTGAGGTAAAACACCTAAATGCTGGCGGAATAATTGAAGTGGCTGTTGTGGAATACCAACAGAATTTGGTACGGCTCCAGGGGTTGGGGTGGCAAGTGGAGTAGACCCAACTGAAGGCAGCACGAAGGAGTTGATTCCCTCTTGGGCATGCCCAGTTTGTGTGGG]




>consensus_8106#0
CTCTATATTTTTCGCTGCAACTTTAGGGTTGGCCTGTTTGCCTTACACCGAAGTACAACA
GTAGTGACATGTTTCTCGAAGCACCAAAATTTACTTTACAGGTAAAGAGGCGGAAAGAAC
GGCAATCCCACCAGCTCACTTTAATGAACTTAAATGTCCAAAGAGTAACTATAACCTCGG
AGAAGAAACCCCACGCTTTCTTGCAGCAAACTTAAAACCAAGGGGAGCAAAGGCCAAAAG
GGGCAAAAAAAAAAATTGGAACAAGCGTGGACCCTCGTCTCTAACTGAATGGTCAGTTCC
AGCTACATATAATACCACAGAAATAAGCGCTAGACCATTTGGGAATCTGCAACATTTCCT
TGCAGATCATCCATGCTTGATATATACACTCTTGATCAGGCACCTCTATGCTGAAAGCCC
AAAAAAAACTTCCTTTGCCAACACTTAGATATCCAACAAATAACTGTTCTTTTTCATCCT
ATGATGGCTACTCGGAAAAATATACTACCTCCGTTAATAATTAGGCCAGTTCATCTGAGC
CCGTTGTGGCTGCTGATAACCATTGGCAGGTGGTCCAACCATTTCACCACCAACCCCAGC
AATGGCCTGAGGTGGCTGTAGTAGTGGATGAACAGCGGCTCCAGCCATTGTCTGTGCCGG
GTGATATATCCCTCCAAAAGTACCATGACCAGCTTGAGCAGGGGCAAACGCCAGGTGCTG
TCCCTGCAGAGGCAGTCCGTAATAGTTGCTAGGCTGGAGACCAGAAATATCACGTCCTGG
GGCAGGAATCCAGACACCGGAGCCTTCGCTCTGCTGCCCGGCAATATAGACATTGGTTTC
TTTGAATTGGGATCCACTGATATCATCACTCTCGACAGAAGTTCCACTTGCCACCATAGT
GTTATTTGTATAGATTGACGGACTAGAATCATATGTTCCATATGCACCATGGTTTCCAAC
ATGTGTCTGGGTTCCATTGTTAGCACCAGGCTTGTATGTATTGGTTGGGTATTTACCTGG
TGGTGCAACAGCTGCACTTACAGGTGGATACATGCCTCCGGTTGAAGGGGGTTGAGGAAC
CATGAAATGAAGGGGTTGTGGTGGAACATAGAGTGGATACTGACTGTATGGGAAATAATT
TGGTGGGTATTGAGGTAAAACACCTAAATGCTGGCGGAATAATTGAAGTGGCTGTTGTGG
AATACCAACAGAATTTGGTACGGCTCCAGGGGTTGGGGTGGCAAGTGGAGTAGACCCAAC
TGAAGGCAGCACGAAGGAGTTGATTCCCTCTTGGGCATGCCCAGTTTGTGTGGG
clustalw multiple alignements is not computed in this case