These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8116#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 782 fasta sequence [GAGTTTTTTTTTCCTTTTAAGGACTGAAGTTTTGTCTATCTTTAATTTTA-CCCCTTATGTGAACACACACACACATATATATCCCAATGTTTACCAATATATATGTATTTACGTATGTATGTATGTGTTTCTTATGTTTAGTTACA-GAGAT-GGAAAGAACATTAATAAATATACACCAAGACCAAAAACTGACAAAAACAAAAGATGTAGAGGGGGCAAGCAAC-AGAGAGAACAACAAAATGTGTGACTAAACAATCTATAACATACACTTCCTCCTATCTTTCTTTCCTGTATACAAATTATCTTTAACCCCCCAACAATAATGCCTAAACTAAAGGAATTAATCTAGCTAAATTAAGAATCATCTTGGAAAA---AAGGAGAGTTCTCTCATATTAATATTTCTCCCCATCCCATGCATGCATATGCATCCATCACCTCCAAGGCTAGGCACCATTTTGCAAATTAATCTCTCTCTCTAGAGA--TCTCTGATGCTTGATCTCTTTTAATTTCTCTCTCCTTGCTGTAACTT-TTTTTGTTTCTCTCTCTAGATCTTCTTCTCACTCTAGTGCTCCAAGTGCAATGCATGGATGAGCCAAATCATGGATGGATAGGTAGGTGTGTAGAATGCAGAAATGATCAGCAACCACTGTAGTCTCGCAAGGAGAAGCGGCCGCTGCCGTCGGGCCCGGCGTTGCCGGCGCCGGCGTGCTGCAGGCCCAGCGTCAGCGACACGTCGCCTGCCGCCGCCGCGGCGCCGGCCGGGTCGAACCGCCCGTACAGGT] [+] EMBL CB620921 [GAGTTTTTTTTTCCTTTTAAGGACTGAAGTTTTGTCTATCTTTAATTTTA CCCCTTATGTGAACACACACACACATATATATCCCAATGTTTACCAATATATATGTATTTACGTATGTATGTATGTGTTTCTTATGTTTAGTTACA GAGAT GGAAAGAACATTAATAAATATACACCAAGACCAAAAACTGACAAAAACAAAAGATGTAGAGGGGGCAAGCAAC AGAGAGAACAACAAAATGTGTGACTAAACAATCTATAACATACACTTCCTCCTATCTTTCTTTCCTGTATACAAATTATCTTTAACCCCCCAACAATAATGCCTAAACTAAAGGAATTAATCTAGCTAAATTAAGAATCATCTTGGAAAA AAGGAGAGTTCTCTCATATTAATATTTCTCCCCATCCCATGCATGCATATGCATCCATCACCTCCAAGGCTAGGCACCATTTTGCAAATTAATCTCTCTCTCTAGAGATCTCTCTGATGCTTGATCTCTTTTAATTTCTCTCTCCTTGCTGTAACTTCTTTTTGTTTCTCTCTCTAGATCTTCTTCTCACTCTAGTGCTCCAAGTGCAATGCATGGATGAGCCAAATCATGGATGGATAGGTAGGTGTGTAGAATGCAGAAATGATCAGCAACCACTGTAGTCTCGCAAGGAGAAGCGGCCGCTGCCGTCGGGCCCGGCGTTGCCGGCGCCGGCGTGCTGCAGGCCCAGCGTCAGCGACACGTCGCCTGCCGC ] [+] EMBL CB620882 [ TTTACCCCCCTTTGAGAACACACACACACATATATATCCCAATGTTTACCAATATATATGTATTTACGTATGTATGTATGCGTTTCTTATGTTTAGTTACA GAGAT GGAAAGAACATTAATAAATATACACCAAGACCAAAAACTGACAAAAACAAAAGATGTAGAGGGGGCAAGCAAC AGAGAGAACAACAAAATGTGTGACTAAACAATCTATAACATACACTTCCTCCTATCTTTCTTTCCTGTATACAAATTATCTTTAACCCCCCAACAATAATGCCTAAACTAAAGGAATTAATCTAGCTAAATTAAGAATCATCTTGGAAAA AAGGAGAGTTCTCTCATATTAATATTTCTCCCCATCCCATGCATGCATATGCATCCATCACCTCCAAGGCTAGGCACCATTTTGCAAATTAATCTCTCTCTCTAGAGATCTCTCTGATGCTTGATCTCTTTTAATTTCTCTCTCCTTGCTGTAACTTCTTTTTGTTTCTCTCTCTAGATCTTCTTCTCACTCTAGTGCTCCAAGTGCAATGCATGGATGAGCCAAATCATGGATGGATAGGTAGGTGTGTAGAATGCAGAAATGATCAGCAACCACTGTAGTCTCGCAAGGAGAAGCGGCCGCTGCCGTCGGGCCCGGCGTTGCCGGCGCCGGCGTGCTGCAGGCCCAGCGTCAGCGACACGTCGCCTGCCGCCGCCGCGGCGCCGGCCGGGTCGAACCGCCCGTACAGGT] [+] EMBL CB636148 [ CCAATATATATTTTTTTACGTATGTATGTATGTGTTTCTTATGTTTAGTTACAGGATATGGGAAACAACATTAATAAGTATACACCAAGACCAAAAACTGACAAAAACAAAAGATGTATAGGGGGCAAGCAACGAGACAGAACAACAAAATGTGTGACTAAACAATGTATAACATACACTTCCTCCTATCTTTCTTTCCTGTATACAAATTATACTTAACCCCCCAACAATAATGCCTAAACTAAAGGAATTAATCTAGCTAAATTAAAAATCATCTTGGAAAAAAGAAGGAGAGTTCTCTCATATTAATATTTCTCCCCATCCCATGCATGCATATGCATCCATCACCTCCAAGGCTAGGCACCATTTTGCAAATTAATCTCTCTCTGTAGAGA TCTCTGATGCTTGATCTCTTTTAATTTCTCTCTCCTTGCTGTAACTT TTTTTGTTTCTCTCTCTAGATCTTCTTCTCACTCTAGTGCTCCAAGTGCAATGCATGGATGAGCCAAATCATGGATGGATAGGTAAGTGTGTAGTCTGCANAAATGATCAGCAACCAC ] [-] EMBL CB683353 [ CCAATATATATGTATTTACGTATGTATGTATGTGTTTCTTATGTTTAGTTACA GAGAT GGAAAGAACATTAATAAGTATACACCAAGACCAAAAACTGACAAAAACAAAAGATGTAGAGGGGGCAAGCAAC AGAGAGAACAACAAAATGTGTGACTAAACAATCTATAACATACACTTCCTCCTATCTTTCTTTCCTGTATACAAATTATCCTTAACCCCCCAACAATAATGCCTAAACTAAAGGAATTAATCTAGCTAAATTAAGAATCATCTTGGAAAAAAGAAGGAGAGTTCTCTCATATTAATATTTCTCCCCATCCCATGCATGCATATGCATCCATCACCTCCAAGGCTAGGCACCATTTTGCAAATTAATCTCTCTCTCTAGAGA TCTCTGATGCTTGATCTCTTTTAATTTCTCTCTCCTTGCTGTAACTT TTTTTGTTTCTCTCTCTAGATCTTCTTCTCACTCTAGTGCTCCAAGAGCGATGC ] [+] EMBL CB665414 [ GAGAGCTTTCTCATATTAATATTTCTCCCCATCCCATGCATGCATATGCATCCATCACCTCCAAGGCTAGGCACCATTTTGCAAATTAATCTCTCTCTCTAGAGA TCTCTGATGCTTGATCTCTTTTAATTTCTCTCTCCTTGCTGTAACTT TTTTTGTTTCTCTCTCTACATCTTCTTCTCACTCTAGTGCTCCAAGTGCAATGCATGGATGAGCCAAATCATGGATGGATAGGTAGGTGTGTAGTATGCACAAATGATCAGCAACCACTGTAGTCTCGCAAGGAGAAGCGGCCGCTGCCGTCGGGCCCGGCGTTGCCGGCGCCGGCGTGCTGCAGGCCCACCGTCAGCGACACCTCGCCgg ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||