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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8120#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1632 fasta sequence
[AGAGAGCTGGAAATGGATCCCCTTTAAAAGCCGTTGCGTTGGCTCTGCCGCCTTGGCAACAACATCCAATTTCCAAACCAAGAGAGAAGCAGCAGCGATGGCGATGCGGCAGGGAGCGCTGCGAGGCCCCTCCGATTACTCCCAGGAGCCCACCCGCCACCCCTCCCTGCGCATCAACGCCAAGGAGCCGTTCAATGCGGAGGCGACGAGGCGGGACCTCGTGGCGTCCTACATCACCCCCGTGGATCTCTTCCTCAAGAGGAACCATGGCCCCATCCCCATCCTCCACGACATCGACAGCTACTATGTGACGGTTGCCGGTCTGATAGAGAGGCCAGCGAAGCTTTATCTGAATGACATCAAGAAGCTGCCCAAGTACAATGTCACTGCCACTCTGCAGTGTGCAGGGAACAGGAGG-ACCGAAATGA-GCAA-GAGCAGGAAGGTGA-GAGGCGTCGGA-TGGGATGTCTGCGCTCTCGGGAATGCGACATGGGGAGGAGCTAAGTTATCTGATGTCCTTCAGCTCATTGGTGTGCCATATCATACTGAAATTACTCCATCAGGAGGAAAGCATGTTGAGTTCACTAGTGTAGATCAGTGCCCTGAGGAAAAAGGTGGCCCTTACAAAGCATCGATTTCTTTAGGCCATGCAACAAATCCTGCAGCAGATGTACTGGTTGCATATGAAATGAATGGTGAGGTGCTCAAGCGTGATCATGGATACCCTCTCCGTGTCGTAGTTCCAGGTGTGATTGGTGCTCGTTCAGTCAAATGGTTGGACAGAATTGACATAATTGAGGAAGAGTGTCAGGGTTTCTTTATGCAAAAGGATTACAAAATGTTCCCTCCATCTGTTGATTGGGACAATATTGTGTGGTCAACCAGGAAGCCCCAAATGGACTACCCAGTTCAGTCTGCCATATGCTCTTTGGAAGACA-CAAATG-CCATCATTCCAGGAGAAGTGACTGTCACTGGATATGCGTTGTCAGGAGGCGGCCGAGGTATTGAGAGGGTGGATATATCCACTGACGGTGGCAAGACTTGGTTCGGTGCTGTCCGGTACCAAAAGGAAGGTGTACCATACGTCGCAGGTGACATAAGTAGTGACAAGTGGGCTTGGGTTCTCTTCAAGACTGTTATCGATGTGAAAGGTGACACGGAGGTTATCGTAAAAGCGGTTGATTCCAGTGCAAATGTGCAACCTGAGAGCGTGGAGACCATATGGAACCTTAGAGGGATCCTGAACACCTGCTGGCACCGTGTTCGCCTTCTGACAATACACAACCTTAGAAGCCTTTTGTGATGATCCTACACATACACCTAACTAGTATTATCTCTTTAAATTTACCGCTCTATGTTGCACTGTCGTTCCGCTTTCGGATCTGCATTGGAGAAAAAGAGTCAAGAGGGACCAATAATATAATGCTGGCTGACTTGCTTGGATGCTGGAATAAAATCCCGTGCCACCTTGTTATCCTATTCTTTTTGAGTAAGAAATATGTGTGTATGAAATAATGGGCACAGGCTAGATCAACCTCATTTAAGAGTGCAAAACAGTTTGCCTCTTTGTTTTATTTGGATGCAACAATTGGTCAACATAAAAAAAAAAGTTTCAGATTTGTGTAAAAAAAAAAA]
[+] EMBL AK069818 [AGAGAGCTGGAAATGGATCCCCTTTAAAAGCCGTTGCGTTGGCTCTGCCGCCTTGGCAACAACATCCAATTTCCAAACCAAGAGAGAAGCAGCAGCGATGGCGATGCGGCAGGGAGCGCTGCGAGGCCCCTCCGATTACTCCCAGGAGCCCACCCGCCACCCCTCCCTGCGCATCAACGCCAAGGAGCCGTTCAATGCGGAGGCGACGAGGCGGGACCTCGTGGCGTCCTACATCACCCCCGTGGATCTCTTCCTCAAGAGGAACCATGGCCCCATCCCCATCCTCCGCGACATCGACAGCTACTATGTGACGGTTGCCGGTCTGATAGAGAGGCCAGCGAAGCTTTATCTGAATGACATCAAGAAGCTGCCCAAGTACAATGTCACTGCCACTCTGCAGTGTGCAGAGAACAGGAGG ACCGAAATGA GCAA GAGCAGGAAGGTGA GAGGCGTCGGA TGGGATGTCTGCGCTCTCGGGAATGCGACATGGGGAGGAGCTAAGTTATCTGATGTCCTTCAGCTCATTGGTGTGCCATATCATACTGAAATTACTCCATCAGGAGGAAAGCATGTTGAGTTCACTAGTGTAGATCAGTGCCCTGAGGAAAAAGGTGGCCCTTACAAAGCATCGATTTCTTTAGGCCATGCAACAAATCCTGCAGCAGATGTACTGGTTGCATATGAAATGAATGGTGAGGTGCTCAAGCGTGATCATGGATACCCTCTCCGTGTCGTAGTTCCAGGTGTGATTGGTGCTCGTTCAGTCAAATGGTTGGACAGAATTGACATAATTGAGGAAGAGTGTCAGGGTTTCTTTATGCAAAAGGATTACAAAATGTTCCCTCCATCTGTTGATTGGGACAATATTGTGTGGTCAACCAGGAAGCCCCAAATGGACTACCCAGTTCAGTCTGCCATATGCTCTTTGGAAGACA CAAATG CCATCATTCCAGGAGAAGTGACTGTCACTGGATATGCGTTGTCAGGAGGCGGCCGAGGTATTGAGAGGGTGGATATATCCACTGACGGTGGCAAGACTTGGTTCGGTGCTGTCCGGTACCAAAAGGAAGGTGTACCATACGTCGCAGGTGACATAAGTAGTGACAAGTGGGCTTGGGTTCTCTTCAAGACTGTTATCGATGTGAAAGGTGACACGGAGGTTATCGTAAAAGCGGTTGATTCCAGTGCAAATGTGCAACCTGAGAGCGTGGAGACCATATGGAACCTTAGAGGGATCCTGAACACCTGCTGGCACCGTGTTCGCCTTCTGACAATACACAACCTTAGAAGCCTTTTGTGATGATCCTACACATACACCTAACTAGTATTATCTCTTTAAATTTACCGCTCTATGTTGCACTGTCGTTCCGCTTTCGGATCTGCATTGGAGAAAAAGAGTCAAGAGGGACCAATAATATAATGCTGGCTGACTTGCTTGGATGCTGGAATAAAATCCCGTGCCAC ]
[+] EMBL AU173155 [ AGCAGCAGCGATGGCGATGCGGCAGGGAGCGCTGCGAGGCCCCTCCGATTACTCCCAGGAGCCCACCCGCCACCCCTCCCTGCGCATCAACGCCAAGGAGCCGTTCAATGCGGAGGCGACGAGGCGGGACCTCGTGGCGTCCTACATCACCCCCGTGGATCTCTTCCTCAAGAGGAACCATGGCCCCATCCCCATCCTCCACGACATCGACAGCTACTATGTGACGGTTGCCGGTCTGATAGAGAGGCCAGCGAAGCTTTATCTGAATGACATCAAGAAGCTGCCCAAGTACAATGTCACTGCCACTCTGCAGTGTGCAGGGAACAGGAGG ACCGAAATGA GCAA GAGCAGGAAGGTGA GAGGCGTCGGA TGGGATGTCTGCGCTCTCGGGAATGCGACATGGGGAGGAGCTAAGTTATCTGATGTCCTTCAGCT ]
[+] EMBL AU062489 [ CAGCANTGGCNATGCGGCANGGAGCNCTGCANGGCCCCTCCAATTACTCCCAGGANCCCACCCGCCACCCCTCCCTGCGCATCAACGCCAAGGAGCCGTTCAATGCGGAGGCNACGAGGCGGGACCTCGTGGCGTCCTACATCACCCCCGTGGATCTNTTCCTCAAGAGGAACCATGGCCCCATCCCCATCCTCCACGACATCGACAGCTACTATGTGACGGTTGCCGGTNTGATAGAGAGGCCAGCG ANTTTTATCTGAATGACATCAAGAAGCTGCCCAAGTACAATGTCACNGCCACTCTGCAGTGTGCAGGGAACAGGAGGAACCGAAATGANGCAAGGAGCAGGAAGGTTAGGAGGCGTCGGATTGGGA ]
[+] EMBL AU092200 [ CATATGCTCTTTGGAAGACACCAAATGCCCATCATTCCAGGAGAAGTGACTGTCACTGGATATGCGTTGTCAGGAGGCGGCCGAGGTATTGAGAGGGTGGATATATCCACTGACGGTGGCAAGACTTGGTTCGGTGCTGTCCGGTACCAAAAGGAAGGTGTACCATACGTCGCAGGTGACATAAGTAGTGACAAGTGGGCTTGGGTTCTCTTCAAGACTGTTATCGATGTGAAAGGTGACACGGAGGTTATCGTAAAAGCGGTTGATTCCAGTGCAAATGTGCAACCTGAGAGCGTGGAGACCATATGGAACCTTAGAGGGATCCTGAACACCTGCTGGCACCGTGTTCGCCTTCTGACAATACACAACCTTAGAAGCCTTTTGTGATGATCCTACACATACACCTAACTAGTATTATCTCTTTAAATTTACCGCTCTATGTTGCACTGTCGTTCCGCTTTCGGATCTGCATTGGAGAAAAAGAGTCAAGAGGGACCAATAATATAATGCTGGCTGACTTGCTTGGATGCTGGAATAAAATCCCGTGCCACCTTGTTATCCTATTCTTTTTGAGTAAGAAATATGTGTGTATGAAATAATGGGCACAGGCTAGATCAACCTCATTTAAGAGTGCAAAACAGTTTGCCTCTTTGTTTTATTTGGATGCAACAATTGGTCAACATAAAAAAAAAA ]
[+] EMBL AU173156 [ AGAGCGTGGAGACCATATGGAACCTTAGAGGGATCCTGAACACCTGCTGGCACCGTGTTCGCCTTNTGACAATACACAACCTTAGAAGCCTTTTGTGATGATCCTACACATACACCTAACTAGTATTATCTCTTTAAATTTACCGCTCTATGTTGCACTGTCGTTCCGCTTTCGGATCTGCATTGGAGAAAAAGAGTCAAGAGGGACCAATAATATAATGCTGGCTGACTTGCTTGGATGCTGGAATAAAATCCCGTGCCNCCTTGTTATCCTATTCTTTTTGAGTAAGAAATATGTGTGTATGAAATAATGGGCACAGGCTAGATCAACCTCATTTAAGAGTGCAAAACAGTTTGCCTCTTTGTTTTATTTGGATGCAACAATTGGTCAACATACATGGAATGGTTTCAGATTTGTGTAAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||