These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8131#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1046 fasta sequence [TCTCTTGCTCTCAAGCGGCGTGCAACCATGGCGGCCACGGCCTCCTCCTTCCTCGCCCGCCGCCTCCTCCTCACCCGCCGCGTCCTTTCCTCCCCCCTCCGCCCCTTCTCCACCACTGACTCCTCCTCATCCT-CCTCCTCCTCCTCTTCCTCCGACGACTCCCGTGCGGGATCTGATGCGGGACCCGACCCCGAGCAGCAGCAACCGCCACCAGCGGGCCAGGATCAGCAGGCCGCCGCCCGGCCGCGCGCCGGCGACACCCGTCCCCTCGAGAACGGCCTTGACCCCGGAATCTACAAGGCGATAATGGTGGGGAAGGT-GGGGCAGGAGCCGATACAGAAGCGGCTGAGGAGCGGGAGAACGGTCGTGCTGTTCTCGCTCGGCACCGGCGGCATCCGCAACAACCGCCGCCCGCTGGACCGCGAGGAGCCGCACCAGTACGCTGAACGATGCTCCGTGCAGTGGCACCGCGTCTGCATCTACCCGGAACGGCTCGGCAGCCTCGCGCTCAAGCACGTCAAGACCGGTTCTGTTCTTTATCTGGAAGGGAATCTTGAGACGAAAGTGTTTTCTGATCCTATAACTGGACTGGTTCGGCGCATAAGAGAAATAGCTGTGCGCTCAAATGGCCGTCTCTTGTTTCTTGGGAATGATTGTAATGCGCCCAAGTTAGGTGAAGCCAAGG-G-CGTTGGC-TACTT-CTGAAAC-TGAGGTCCACTCGACATCAAGGTATATCAG-TTGAT-AAAATTGATTTAAATTAGAGGTATCTCAACTGTGCTTAGCTTTAAGCGTT-CAACGTATGGTGAAGATCTCAGTAGTGGACCAGCTTTATGGAACAAATACAGTTGGACATCATTGTCGAAACCCTCTAATAATTGAACAACTGATTGTACTGTATAACTTGATTTTGACAAAACAACATATGTGGCTGTGCTATTTATTTTAGTTCTCCCAAAATTTCTTTTGACCTTTTGGGTCAGAGAAGTTTGTGAATTTGAGCTTTTCTAC-AATAAAATGGATCTGTTTACTCNNNNNNNNNNNNNNNNNNN] [+] EMBL C72418 [TCTCTTGCTCTCAAGCGGCGTGCAACCATGGCGGCCACGGCCTCCTCCTTCCTCGCCCGCCGCCTCCTCCTCACCCGCCGCGTCCTTTCCTCCCCCCTCCGCCCCTTCTCCACCACTGACTCCTCCTCATCCTATCTCCTCCTCCTCTTCCTCCGACGACTCCCGTGCGGGATCTGATGCGGGACCCGACCCCGAGCAGCAGCNACCGCCACCAGCGGGCCAGGATCAGCAGGCCGCCGCCCGGCCGCGCGCNGGCGANACCCGTTCCCTCGAGAACGGCCTTGACCCCGGAATCTACAAGGCGATAATGGTGGGGAAGGTGGGGGCAGGAGCTGATANAGAAGCAGCT ] [+] EMBL AK073560 [ TCTTGCTCTCAAGCGGCGTGCAACCATGGCGGCCACGGCCTCCTCCTTCCTCGCCCGCCGCCTCCTCCTCACCCGCCGCGTCCTTTCCTCCCCCCTCCGCCCCTTCTCCACCACTGACTCCTCCTCATCCT CCTCCTCCTCCTCTTCCTCCGACGACTCCCGTGCGGGATCTGATGCGGGACCCGACCCCGAGCAGCAGCAACCGCCACCAGCGGGCCAGGATCAGCAGGCCGCCGCCCGGCCGCGCGCCGGCGACACCCGTCCCCTCGAGAACGGCCTTGACCCCGGAATCTACAAGGCGATAATGGTGGGGAAGGT GGGGCAGGAGCCGATACAGAAGCGGCTGAGGAGCGGGAGAACGGTCGTGCTGTTCTCGCTCGGCACCGGCGGCATCCGCAACAACCGCCGCCCGCTGGACCGCGAGGAGCCGCACCAGTACGCTGAACGATGCTCCGTGCAGTGGCACCGCGTCTGCATCTACCCGGAACGGCTCGGCAGCCTCGCGCTCAAGCACGTCAAGACCGGTTCTGTTCTTTATCTGGAAGGGAATCTTGAGACGAAAGTGTTTTCTGATCCTATAACTGGACTGGTTCGGCGCATAAGAGAAATAGCTGTGCGCTCAAATGGCCGTCTCTTGTTTCTTGGGAATGATTGTAATGCGCCCAAGTTAGGTGAAGCCAAGG G CGTTGGC TACTT CTGAAAC TGAGGTCCACTCGACATCAAGGTATATCAG TTGAT AAAATTGATTTAAATTAGAGGTATCTCAACTGTGCTTAGCTTTAAGCGTT CAACGTATGGTGAAGATCTCAGTAGTGGACCAGCTTTATGGAACAAATACAGTTGGACATCATTGTCGAAACCCTCTAATAATTGAACAACTGATTGTACTGTATAACTT ] [+] EMBL AK063836 [ TCAAGCGGCGTGCAACCATGGCGGCCACGGCCTCCTCCTTCCTCGCCCGCCGCCTCCTCCTCACCCGCCGCGTCCTTTCCTCCCCCCTCCGCCCCTTCTCCACCACTGACTCCTCCTCATCCT CCTCCTCCTCCTCTTCCTCCGACGACTCCCGTGCGGGATCTGATGCGGGACCCGACCCCGAGCAGCAGCAACCGCCACCAGCGGGCCAGGATCAGCAGGCCGCCGCCCGGCCGCGCGCCGGCGACACCCGTCCCCTCGAGAACGGCCTTGACCCCGGAATCTACAAGGCGATAATGGTGGGGAAGGT GGGGCAGGAGCCGATACAGAAGCGGCTGAGGAGCGGGAGAACGGTCGTGCTGTTCTCGCTCGGCACCGGCGGCATCCGCAACAACCGCCGCCCGCTGGACCGCGAGGAGCCGCACCAGTACGCTGAACGATGCTCCGTGCAGTGGCACCGCGTCTGCATCTACCCGGAACGGCTCGGCAGCCTCGCGCTCAAGCACGTCAAGACCGGTTCTGTTCTTTATCTGGAAGGGAATCTTGAGACGAAAGTGTTTTCTGATCCTATAACTGGACTGGTTCGGCGCATAAGAGAAATAGCTGTGCGCTCAAATGGCCGTCTCTTGTTTCTTGGGAATGATTGTAATGCGCCCAAGTTAGGTGAAGCCAAGG G CGTTGGC TACTT CTGAAAC TGAGGTCCACTCGACATCAAGGTATATCAG TTGAT AAAATTGATTTAAATTAGAGGTATCTCAACTGTGCTTAGCTTTAAGCGTT CAACGTATGGTGAAGATCTCAGTAGTGGACCAGCTTTATGGAACAAATACAGTTGGACATCATTGTCGAAACCCTCTAATAATTGAACAACTGATTGTACTGTATAACTTGATTTTGACAAAACAACATATGTGGCTGTGCTATTTATTTTAGTTCTCCCAAAATTTCTTTTGACCTTTTGGGTCAGAGAAGTTTGTGAATTTGAGCTTTTCTAC AATAAAATGGAT ] [+] EMBL CA755223 [ ACCAGTACGCTGAACGATGCTCCGTGCAGTGGCACCGCGTCTGCATCTACCCGGAACGGCTCGGCAGCCTCGCGCTCAAGCACGTCAAGACCGGTTCTGTTCTTTATCTGGAAGGGAATCTTGAGACGAAAGTGTTTTCTGATCCTATAACTGGACTGGTTCGGCGCATAAGAGAAATAGCTGTGCGCTCAAATGGCCGTCTCTTGTTTCTTGGGAATGATTGTAATGCGCCCAAGTTAGGTGAAGCCAAGG G CGTTGGC TACTT CTGAAAC TGAGGTCCACTCGACATCAAGGTATATCAG TTGAT AAAATTGATTTAAATTAGAGGTATCTCAACTGTGCTTAGCTTTAAGCGTT CAACGTATGGTGAAGATCTCAGTAGTGGACCAGCTTTATGGAACAAATACAGTTGGACATCATTGTCGAAACCCTCTNATAATTGAACAACTGATTGTACTGTATAACTTGATTTTGACAAAACAACATATGTGGCTGTGCTATTTATTTTAGTTCTCCCAAAATTTCTTTTGACCTTTTGNGTCAGAGAAGTTTGTGAATTTGAGCTTTTCTACNNATAAATGGGATCTGTTTACTCNNNNNNNNNNNNNNNNNNN] [+] EMBL AU101148 [ gtTGAAGCCAAGGNGCCGTTGGCTTACTTCCTGAAACTTGAGGTCCAATCGACATCAAGGTATATCAGTTTGATAAAAATTGATTTAAATTAGAGGTATCTCAACTGTGCTTAGCTTTAAGCGTTNCAACGTATGGTGAAGATCTCAGTAGTGGACCAGCTTTATGGAACAAATACAGTTGGACATCATTGTCGAAACCCTCTAATAATTGAACAACTGATTGTACTGTATAACTTGATTTTGACAAAACAACATATGTGGCTGTGCTATTTATTTTAGTTCTCCCAAAATTTCTTTTGACCTTTTGGGTCAGAGAAGTTTGTGAATTTGAGCTTTTCTAC AATAAAATGGATCTGTTTACTCaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||