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Oryza sativa
cluster # 8137 cluster # 8137       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8137#0 length = 2221 sequences # 5  

consensusID : consensus_8137#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2221
fasta sequence
                              [GCGCGCATACACCAGCAAATTGCCAAATCCTAGCGTCGAAAGCGCCCCCAGACCACGAGCCAGTCAGAGACGGATCTGGCCGGCCGATGCGCGCGTGAGGCATCGTCAGCCAGAGCCAGCTAGTGTGTTTGTGTGTGTCACTGTGGTGGTGTGTGGCCTGTCACCTCACCTGATCCAACACAAGCGCGAGGAGGCGAAGGCGATGCTGCAGCGGTTGGGCATCGGGGGCCGCGCGGCGGAGGAGACCGAGCCGGCGCGCTTCGCCTTCGCCGACGCCCTCCCGGCATGGCCGCAAGGTGGTGGGTTTGCGACGGGGAGGATCTGCGTGGGGGAGCTGGAGCTCGCGGCGGTCACCGCGTTCGAGAAGATCTGCGCCCTGTCGGCGACGAAGGGCGGCGGCGGCGGCGTCACGTTCTACAGGCCGGCCGGCGTGCCGGGGGGGTTCTCCGTGCTCGGCCATTACTGCCAGTCCAACACACGCCCGCTCCACGGCCACCTGCTCGTCGCCAAGGCGGTGGCGGGCAAGCCGGAGTCGGAGTCGCTGCCGCCTCTCCGGCCGCCGCACGACTACGAGCTCGTGTGCGCGTTCCGCGCCGATGGCGTCGGGGAGGACAGGAAGTCTTGCCGTGGGTACGGCCGCACCGGCGCCTACTTCTGGCTTCCCGTGCCGACGGATGGGTACCGGGCGCTCGGGCTGCTCGTCACGGCTGAGCCCGACAAGCCGCCGCTCAGGGAGGTGGCGTGCGCCCGCGCGGACCTCACCGACGAGTGCGAGCCCCACGGGTCGCTGCTGCAGCTCCAGCTCGTGGGGCAATCGGCGTGCTGGTCGTCGTCGACGGTCCCAGCGGCGTTCGCCCTGCGTGGCATCAGGCCGACGCACCGGGGGATGTGGGGGCGGGGCATCGGCGCCGGGACGTTCTGCTGCGGCGCGGTGGGGCTGTCGCCGCGGGAGCAGGGCATGGCGTGCCTCAAGAACGTGGACCTCGACCTGTCGGCGATGCCGACGCTGGAGCAGGCGCACGCGGTGATCCGCCACTACGGCCCGACGCTGTACTTCCACCCCAAGGAGGTGTACCTCCCGTCGTCCGTCTCCTGGTTCTTCAAGAACGGCGCCGCGCTGTGCAAGAAAGGGGAGGACGCCGCCGTGGAGCTCGACGTTGAGGGGTCCCACCTCCCGTGCGGCGAGTGCAACGACGGCGAGTACTGGATCGGCCTGCCGGACGGCAAGCGTGGGGAGTCCATCATCTACGGCGACATCGACAGCGCGGAGCTGTACGCGCACGTGAAGCCGGCGATGGGCGGGACGTGCACCGACGTCGCCATGTGGGTGTTCTGCCCGTTCAATGGCCCGGCCAGGTTCAAGTTGGGGCCGATCACCATCCCGCTCGGCAAGACCGGGCAGCACATCGGCGACTGGGAGCACTTCACGCTCCGCGTCAGCAACTTCACCGGCGAGCTCATGGCCGTCTACTTCTCGCAGCACAGCGGCGGGCGGTGGGTGGACGCGTCCGCGCTCGAGTACACCGCGGGGAACAAGCCGGCGGTGTACTCCTCCCGGAACGGCCACGCCAGCTACCCGTTCCCGGGCGTGTACCTGCAGGGGTCGGCGGCGCTCGGGATCGGCAT-CCGGAACGACGCGGCGCGGAGCGAGCTGGCCGTGGATTCCAGCGCCAAGTACAGGATCGTGGCGGCGGAGTACCTCGGCGAGGGCGCCGTGGAGGAGCCGCGGTGGCTCAACTTCATGAGGGTGTGGGGGCCGACGGTGGTGTACAAGTCGAGGCAGAGGATGGAGCGGATGACGAGCGCGATGCACCGCCGGCTGAGGAGCCCCGCAGAGAGGATGCTGAACAAGCTGCCCAACGAGCTGTCCAGGGA-GGAGGGGCCGACGGGGCCCAAGGAGAAGAACAACTGGGAAGGGGA-CGAGCGATGGTAGGAG-GCTGAGGATTTGTCATTTGTGCTTTGGTGTGTCTGTTTGTTTCGTTTTGGTTCAGGTGTTTTACGGTTA-CTGGAGCAGCTTGTACTGTGACAGAGATGTAGTACTACGTGATTATTATTCATGATTGAGGGAACAGATTTGCTA-T-TG-TTTGTACTTTGTAGGCTATTATTATACTGTCCACTACTACTACAGTACGTGAGAACAAGGGACTACCTACTTGAGTATTTTGTCAAACCGATTTTGTTTCGATTAGTAATCCAGTATGGTTGCAACCAAAAAAAAAAA]

[+] EMBL AK072156             [GCGCGCATACACCAGCAAATTGCCAAATCCTAGCGTCGAAAGCGCCCCCAGACCACGAGCCAGTCAGAGACGGATCTGGCCGGCCGATGCGCGCGTGAGGCATCGTCAGCCAGAGCCAGCTAGTGTGTTTGTGTGTGTCACTGTGGTGGTGTGTGGCCTGTCACCTCACCTGATCCAACACAAGCGCGAGGAGGCGAAGGCGATGCTGCAGCGGTTGGGCATCGGGGGCCGCGCGGCGGAGGAGACCGAGCCGGCGCGCTTCGCCTTCGCCGACGCCCTCCCGGCATGGCCGCAAGGTGGTGGGTTTGCGACGGGGAGGATCTGCGTGGGGGAGCTGGAGCTCGCGGCGGTCACCGCGTTCGAGAAGATCTGCGCCCTGTCGGCGACGAAGGGCGGCGGCGGCGGCGTCACGTTCTACAGGCCGGCCGGCGTGCCGGGGGGGTTCTCCGTGCTCGGCCATTACTGCCAGTCCAACACACGCCCGCTCCACGGCCACCTGCTCGTCGCCAAGGCGGTGGCGGGCAAGCCGGAGTCGGAGTCGCTGCCGCCTCTCCGGCCGCCGCACGACTACGAGCTCGTGTGCGCGTTCCGCGCCGATGGCGTCGGGGAGGACAGGAAGTCTTGCCGTGGGTACGGCCGCACCGGCGCCTACTTCTGGCTTCCCGTGCCGACGGATGGGTACCGGGCGCTCGGGCTGCTCGTCACGGCTGAGCCCGACAAGCCGCCGCTCAGGGAGGTGGCGTGCGCCCGCGCGGACCTCACCGACGAGTGCGAGCCCCACGGGTCGCTGCTGCAGCTCCAGCTCGTGGGGCAATCGGCGTGCTGGTCGTCGTCGACGGTCCCAGCGGCGTTCGCCCTGCGTGGCATCAGGCCGACGCACCGGGGGATGTGGGGGCGGGGCATCGGCGCCGGGACGTTCTGCTGCGGCGCGGTGGGGCTGTCGCCGCGGGAGCAGGGCATGGCGTGCCTCAAGAACGTGGACCTCGACCTGTCGGCGATGCCGACGCTGGAGCAGGCGCACGCGGTGATCCGCCACTACGGCCCGACGCTGTACTTCCACCCCAAGGAGGTGTACCTCCCGTCGTCCGTCTCCTGGTTCTTCAAGAACGGCGCCGCGCTGTGCAAGAAAGGGGAGGACGCCGCCGTGGAGCTCGACGTTGAGGGGTCCCACCTCCCGTGCGGCGAGTGCAACGACGGCGAGTACTGGATCGGCCTGCCGGACGGCAAGCGTGGGGAGTCCATCATCTACGGCGACATCGACAGCGCGGAGCTGTACGCGCACGTGAAGCCGGCGATGGGCGGGACGTGCACCGACGTCGCCATGTGGGTGTTCTGCCCGTTCAATGGCCCGGCCAGGTTCAAGTTGGGGCCGATCACCATCCCGCTCGGCAAGACCGGGCAGCACATCGGCGACTGGGAGCACTTCACGCTCCGCGTCAGCAACTTCACCGGCGAGCTCATGGCCGTCTACTTCTCGCAGCACAGCGGCGGGCGGTGGGTGGACGCGTCCGCGCTCGAGTACACCGCGGGGAACAAGCCGGCGGTGTACTCCTCCCGGAACGGCCACGCCAGCTACCCGTTCCCGGGCGTGTACCTGCAGGGGTCGGCGGCGCTCGGGATCGGCAT CCGGAACGACGCGGCGCGGAGCGAGCTGGCCGTGGATTCCAGCGCCAAGTACAGGATCGTGGCGGCGGAGTACCTCGGCGAGGGCGCCGTGGAGGAGCCGCGGTGGCTCAACTTCATGAGGGTGTGGGGGCCGACGGTGGTGTACAAGTCGAGGCAGAGGATGGAGCGGATGACGAGCGCGATGCACCGCCGGCTGAGGAGCCCCGCAGAGAGGATGCTGAACAAGCTGCCCAACGAGCTGTCCAGGGA GGAGGGGCCGACGGGGCCCAAGGAGAAGAACAACTGGGAAGGGGA CGAGCGATGGTAGGAG GCTGAGGATTTGTCATTTGTGCTTTGGTGTGTCTGTTTGTTTCGTTTTGGTTCAGGTGTTTTACGGTTA CTGGAGCAGCTTGTACTGTGACAGAGATGTAGTACTACGTGATTATTATTCATGATTGAGGGAACAGATTTGCTA T TG TTTGTACTTTGTAGGCTATTATTATACTGTCCACTACTACTACAGTACGTGAGAACAAGGGACTACCTACTTGA                                                                ]
[+] EMBL AU029780             [                                                                                                                                                                                                                                                                                                        GTGGTGGGTTTGCGACGGGGAGGATCTGCGTGGGGGAGCTGGAGCTCGCGGCGGTCACCGCGTTCGAGAAGATCTGCGCCCTGTCGGCGACGAAGGGCGGCGGCGGCGGCGTCACGTTCTACAGGCCGGCCGGCGTGCCGGGGGGGTTCTCCGTGCTCGGCCATTACTGCCAGTCCAACACACGCCCGCTCCACGGCCACCTGCTCGTCGCCAAGGCGGTGGCGGGCAAGCCGGAGTCGGAGTCGCTGCCGCCTCTCCGGCCGGCGCACGACTACGAGCTCGTGTGCGCGTTNCNGGCGGATGGCGTCGGGGAGGACAGGAAGTCTTGCCGTGGGTACGGCCGAACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BQ909195             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TACTCCTCCCGGAACGGCCACGCCAGCTACCCGTTCCCGGGCGTGTACCTGCAGGGGTC GCGGCGCTCGGGATCGGCAT CCGGAACGACGCGGCGCGGAGCGAGCTGGCCGTGGATTCCAGCGCCAAGTACAGGATCGTGGCGGCGGAGTACCTCGGCGAGGGCGCCGTGGAGGAGCCGCGGTGGCTCAACTTCATGAGGGTGTGGGGGCCGACGGTGGTGTACAAGTCGAGGCAGAGGATGGAGCGGATGACGAGCGCGATGCACCGCCGGCTGAGGAGCCCCGCGGAGAGGATGCTGAACAAGCTGCCCAACGAGCTGTCCAGGGACGGAGGGGCCGACGGGGCCCAAGGAGAAGAACAACTGGGAAGGGGACCGAGCGATGGTAGGAGCGCTGAGGATTTGTCATTTGTGCTTTGGTGTGTCTCTTTGTGTCGTTTTGGTTCAGGTGTTTTACGGTTACCTGGAGCAGCTTGTACTGTGACAGAGATGTAGTACTACGTGATTATTATTCATGATTGAGGGAACAGATTTGCTA TCTGCTTTGTACTTTGTAGGCTATTAaaaaaaa                                                                                                              ]
[+] EMBL BQ909133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCCGGAACGGCCACGCCAGCTACCCGTTCCCGGGCGTGTACCTGCAGGGGTCGGCGGCGCTCGGGATCGGCAT CCGGAACGACGCGGCGCGGAGCGAGCTGGCCGTGGATTCCAGCGCCAAGTACAGGATCGTGGCGGCGGAGTACCTCGGCGAGGGCGCCGTGGAGGAGCCGCGGTGGCTCAACTTCATGAGGGTGTGGGGGCCGACGGTGGTGTACAAGTCGAGGCAGAGGATGGAGCGGATGACGAGCGCGATGCACCGCCGGCTGAGGAGCCCCGCGGAGAGGATGCTGAACAAGCTGCCCAACGAGCTGTCCAGGGA GGAGGGGCCGACGGGGCCCAAGGAGAAGAACAACTGGGAAGGGGA CGAGCGATGGTAGGAG GCTGAGGATTTGTCATTTGTGCTTTGGTGTGTCTCTTTGTGTCGTTTTGGTTCAGGTGTTTTACGGTTA CTGGAGCAGCTTGTACTGTGACAGAGATGTAGTACTACGTGATTATTATTCATGATTGAGGGAACAGATTTGCTACN CGCTTTGTACTTTGTAGGCTATTAaaaaaaa                                                                                                              ]
[+] EMBL AU094777             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                gaATCGGCATCCCGGAACGACGCGGCGCGGAGCGAGCTGGCCGTGGATTCCAGCGCCAAGTACAGGATCGTGGCGGCGGAGTACCTCGGCGAGGGCGCCGTGGAGGANCCGCGNTGGCTCAACTTCATGAGGGTGTGGGGGCCGACGGTGGTGTACAAGTCGAGGCAGAGGATGGAGCGGATGACGAGCGCGATGCACCGCCGGCTGAGGAGCCCCGCAGAGAGGATGCTGAACAAGCTGCCCAACGAGCTGTCCAGGGA GGAGGGGCCGACGGGGCCCAAGGAGAAGAACAACTGGGAAGGGGA CGAGCGATGGTAGGAG GCTGAGGATTTGTCATTTGTGCTTTGGTGTGTCTGTTTGTTTCGTTTTGGTTCAGGTGTTTTACGGTTA CTGGAGCAGCTTGTACTGTGACAGAGATGTAGTACTACGTGATTATTATTCATGATTGAGGGAACAGATTTGCTA T TG TTTGTACTTTGTAGGCTATTATTATACTGTCCACTACTACTACAGTACGTGAGAACAAGGGACTACCTACTTGAGTATTTTGTCAAACCGATTTTGTTTCGATTAGTAATCCAGTATGGTTGCAACCAAAAAAAAAAA]


>consensus_8137#0 GCGCGCATACACCAGCAAATTGCCAAATCCTAGCGTCGAAAGCGCCCCCAGACCACGAGC CAGTCAGAGACGGATCTGGCCGGCCGATGCGCGCGTGAGGCATCGTCAGCCAGAGCCAGC TAGTGTGTTTGTGTGTGTCACTGTGGTGGTGTGTGGCCTGTCACCTCACCTGATCCAACA CAAGCGCGAGGAGGCGAAGGCGATGCTGCAGCGGTTGGGCATCGGGGGCCGCGCGGCGGA GGAGACCGAGCCGGCGCGCTTCGCCTTCGCCGACGCCCTCCCGGCATGGCCGCAAGGTGG TGGGTTTGCGACGGGGAGGATCTGCGTGGGGGAGCTGGAGCTCGCGGCGGTCACCGCGTT CGAGAAGATCTGCGCCCTGTCGGCGACGAAGGGCGGCGGCGGCGGCGTCACGTTCTACAG GCCGGCCGGCGTGCCGGGGGGGTTCTCCGTGCTCGGCCATTACTGCCAGTCCAACACACG CCCGCTCCACGGCCACCTGCTCGTCGCCAAGGCGGTGGCGGGCAAGCCGGAGTCGGAGTC GCTGCCGCCTCTCCGGCCGCCGCACGACTACGAGCTCGTGTGCGCGTTCCGCGCCGATGG CGTCGGGGAGGACAGGAAGTCTTGCCGTGGGTACGGCCGCACCGGCGCCTACTTCTGGCT TCCCGTGCCGACGGATGGGTACCGGGCGCTCGGGCTGCTCGTCACGGCTGAGCCCGACAA GCCGCCGCTCAGGGAGGTGGCGTGCGCCCGCGCGGACCTCACCGACGAGTGCGAGCCCCA CGGGTCGCTGCTGCAGCTCCAGCTCGTGGGGCAATCGGCGTGCTGGTCGTCGTCGACGGT CCCAGCGGCGTTCGCCCTGCGTGGCATCAGGCCGACGCACCGGGGGATGTGGGGGCGGGG CATCGGCGCCGGGACGTTCTGCTGCGGCGCGGTGGGGCTGTCGCCGCGGGAGCAGGGCAT GGCGTGCCTCAAGAACGTGGACCTCGACCTGTCGGCGATGCCGACGCTGGAGCAGGCGCA CGCGGTGATCCGCCACTACGGCCCGACGCTGTACTTCCACCCCAAGGAGGTGTACCTCCC GTCGTCCGTCTCCTGGTTCTTCAAGAACGGCGCCGCGCTGTGCAAGAAAGGGGAGGACGC CGCCGTGGAGCTCGACGTTGAGGGGTCCCACCTCCCGTGCGGCGAGTGCAACGACGGCGA GTACTGGATCGGCCTGCCGGACGGCAAGCGTGGGGAGTCCATCATCTACGGCGACATCGA CAGCGCGGAGCTGTACGCGCACGTGAAGCCGGCGATGGGCGGGACGTGCACCGACGTCGC CATGTGGGTGTTCTGCCCGTTCAATGGCCCGGCCAGGTTCAAGTTGGGGCCGATCACCAT CCCGCTCGGCAAGACCGGGCAGCACATCGGCGACTGGGAGCACTTCACGCTCCGCGTCAG CAACTTCACCGGCGAGCTCATGGCCGTCTACTTCTCGCAGCACAGCGGCGGGCGGTGGGT GGACGCGTCCGCGCTCGAGTACACCGCGGGGAACAAGCCGGCGGTGTACTCCTCCCGGAA CGGCCACGCCAGCTACCCGTTCCCGGGCGTGTACCTGCAGGGGTCGGCGGCGCTCGGGAT CGGCATCCGGAACGACGCGGCGCGGAGCGAGCTGGCCGTGGATTCCAGCGCCAAGTACAG GATCGTGGCGGCGGAGTACCTCGGCGAGGGCGCCGTGGAGGAGCCGCGGTGGCTCAACTT CATGAGGGTGTGGGGGCCGACGGTGGTGTACAAGTCGAGGCAGAGGATGGAGCGGATGAC GAGCGCGATGCACCGCCGGCTGAGGAGCCCCGCAGAGAGGATGCTGAACAAGCTGCCCAA CGAGCTGTCCAGGGAGGAGGGGCCGACGGGGCCCAAGGAGAAGAACAACTGGGAAGGGGA CGAGCGATGGTAGGAGGCTGAGGATTTGTCATTTGTGCTTTGGTGTGTCTGTTTGTTTCG TTTTGGTTCAGGTGTTTTACGGTTACTGGAGCAGCTTGTACTGTGACAGAGATGTAGTAC TACGTGATTATTATTCATGATTGAGGGAACAGATTTGCTATTGTTTGTACTTTGTAGGCT ATTATTATACTGTCCACTACTACTACAGTACGTGAGAACAAGGGACTACCTACTTGAGTA TTTTGTCAAACCGATTTTGTTTCGATTAGTAATCCAGTATGGTTGCAACCAAAAAAAAAA A



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)