These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8141#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1126 fasta sequence [CCTTTTTTTTAATTGAACTTGCGACAATTCATTCACTTGAGTTTGACTGAACCCTGTTTATTTGGTTCATAATTTTTATATCATAGTAACATACATAGAACACCATTTTATTTGCAGTTAATACAACCTTTTTTTCAGCTAAACAAGCTATGGCACAGGGTGCAGCAACTCATGAGCACGATTTCTGACCAACAACAGAGTTGTTAAAACACAGA-TTTTTTTTTCCATTTTCAGGTTAAAGCCCGGTGCAGAGGAACGACAAGACTGATCCTGCTCTGCGCCGCGTCCTCTCGCTCACCTTCCACTCCTCAACGAGGAGCTTCTTCAACTTGGGGCAGCCCGAGACGATAGTCGCTATTCCTGTGCTGCTCACTCGCCTGCAGTACACCATCTGGCATGACTGCAGCGGCAGGCAGCCCCTGACAAGGTGGCCTAGACCAACATCAGTGACCTCTGGACAGTGGGACAGCGCGATATCTTTAAGCTGCGAGCAACCTTCACCGATCTCCGCAAGCGCCATGTCTCCTATGGACCGGAGAACACTTATATCCAAGTAGACCAGATCAGGGCATCCTCTTGCAATTGCAGTGAGCCCATTATCAGTGATTAGTTGGCATCCACACAAGTTTAACTTTCGAAGAGGACAGCCTTCAGCAATTGCAGTCAGCCCTGCATCAGATACCCTCTCACAAAATTGGAGTGTTAACTCTCTAAGCGATTTACAGTTCTCAGCAAAAGATATCAATGCTTTGTCTCCTATCTCATAACCACGCCGAATAGAAAGTTCAGTCAAGTTCTTGCAACCTTGAGCTATGTAGCACAAGGCATCATCACTTATTCTGGAACAGTCGACCAAATAAAGAGACCTGAGAAGGGAGCAACCTCTACCAACCTCCAGAAATGCACTGTCCTGGATCCTTGGACAATAAATTAGAGATAATTCCAAAAGACCCGGGCACCAACGTCCAATGTGCTCCAGTGCAGCAGTTTCCATATTCTGACAACCATTGATCTTCAGGCGTGCTAATTTTTTGCAGCTACGAGCTACAAATTCAAGGCTTCTATCAGTTAGTAAATGGCAGTCATTGAGAATAAGATCTGTGAGATTCTTGCACCCTTTGGCAAT] [+] EMBL CB645754 [CCTTTTTGTTAATTGAACTTGCGACAATTCATTCACTTGACTTTGACTGAACCCTGTTTATTTGGTTCATAATTTTTATATCATAGTAACATACATAGAACACCATTTTATTTGCAGTTAATACAACCTTTTTTTCAGCTAAACAAGCTATGGCACAGGGTGCAGCAACTCATGAGCACGATTTCTGACCAACAACAGAGTTGTTAAAACACAGA TTTTTTTTTCCATTTTCAGGTTAAAGCCCGGTGCAGAGGAACGACAAGACTGATCCTGCTCTGCGCCGCGTCCTCTCGCTCACCTTCCACTCCTCAACGAGGAGCTTCTTCAACTTGGGGCAGCCCGAGACGATAGTCGCTATTCCTGTGCTGCTCACTCGCCTGCAGTACACCATCTGGCATGACTGCAGCGGCAGGCAGCCCCTGACAAGGTGGCCTAGACCAACATCAGTGACCTCTGGACAGTGGGACAGCGCGATATCTTTAAGCTGCGAGCAACCTTCACCGATCTCCGCAAGCGCCATGTCTCCTATGGACCGGAGAACACTTATATCCAAGTAGACCAGATCAGGGCATCCTCTTGCAATTGCAGTGAGCCCATTATCAGTGATTAGTTGGCATCCACACAAGTTTAACTTTCGAAGAGGACAGCCTTCAGCAATTGCAGTCAGCCCTGCATCAGATACCCTCTCACAAAATTGGAGTGTTAACTCTCTAAGCGATTTACAGTTCTCAGCAAAAGATATCAATGCTTTGTCTCCTATCTCATAACCACGCCGAATAGAAAGTTCAGT ] [+] EMBL CF317267 [ TTTTTTAATTGAACTTGCGACAATTCATTCACTTGAGTTTGACTGAACCCTGTTTATTTGGTTCATAATTTTTATATCATAGTAACATACATAGAACACCATTTTATTTGCAGTTAATACAACCTTTTTTTCAGCTAAACAAGCTATGGCACAGGGTGCAGCAACTCATGAGCACGATTTCTGACCAACAACAGAGTTGTTAAAACACAGA TTTTTTTTCCATTTTCAGGTTAAAGCCCGGTGCAGAGGAACGACAAGACTGATCCTGCTCTGCGCCGCGTCCTCTCGCTCACCTTCCACTCCTCAACGAGGAGCTTCTTCAACTTGGGGCAGCCCGAGACGATAGTCGCTATTCCTGTGCTGCTCACTCGCCTGCAGTACACCATCTGGCATGACTGCAGCGGCAGGCAGCCCCTGACAAGGTGGCCTAGACCAACATCAGTGACCTCTGGACAGTGGGACAGCGCGATATCTTTAAGCTGCGAGCAACCTTCACCGATCTCCGCAAGCGCCATGTCTCCTATGGACCGGAGAACACTTATATCCAAGTAGACCAGATCAGGGCATCCTCTTGCAATTGCAGTGAGCCCATTATCAGTGATTAGTTGGCATCCACACAAGT ] [+] EMBL CF316773 [ TTTTTTAATTGAACTTGCGACAATTCATTCACTTGAGTTTGACTGAACCCTGTTTATTTGGTTCATAATTTTTATATCATAGTAACATACATAGAACACCATTTTATTTGCAGTTAATACAACCTTTTTTTCAGCTAAACAAGCTATGGCACAGGGTGCAGCAACTCATGAGCACGATTTCTGACCAACAACAGAGTTGTTAAAACACAGA TTTTTTTTCCATTTTCAGGTTAAAGCCCGGTGCAGAGGAACGACAAGACTGATCCTGCTCTGCGCCGCGTCCTCTCGCTCACCTTCCACTCCTCAACGAGGAGCTTCTTCAACTTGGGGCAGCCCGAGACGATAGTCGCTATTCCTGTGCTGCTCACTCGCCTGCAGTACACCATCTGGCATGACTGCAGCGGCAGGCAGCCCCTGACAAGGTGGCCTAGACCAACATCAGTGACCTCTGGACAGTGGGACAGCGCGATATCTTTAAGCTGCGAGCAACCTTCACCGATCTCCGCA ] [+] EMBL CB621538 [ TCTTTTATTTGAGTTTGACTGAACCCTGTTTATTTGGTTC CAATTTTTATATCATAGTAACATACATAGAACACCATTTTATTTGCAGTTAATACAACCTTTTTTTCAGCTAAACAAGCTATGGCACAGGGTGCAGCAACTCATGAGCACGATTTCTGACCAACAACAGAGTTGTTAAAACACAGATTTTTTTTTTCCATTTTCAGGTTAAAGCCCGGTGCAGAGGAACGACAAGACTGATCCTGCTCTGCGCCGCGTCCTCTCGCTCACCTTCCACTCCTCAACGAGGAGCTTCTTCAACTTGGGGCAGCCCGAGACGATAGTCGCTATTCCTGTGCTGCTCACTCGCCTGCAGTACACCATCTGGCATGACTGCAGCGGCAGGCAGCCCCTGACAAGGTGGCCTAGACCAACATCAGTGACCTCTGGACAGTGGGACAGCGCGATATCTTTAAGCTGCGAGCAACCTTCACCGATCTCCGCAAGCGCCATGTCTCCTATGGACCGGAGAACACT TATCCAAGTAGACCAGATCAGGGCATCCTCTTGCAATTGCAGTGAGCCCATTATCAGTGATTAGTTGGCATCCACACAAGTTTAACTTTCGAAGAGGACAGCCTTCAGCAATTGCAGTCAGCCCTGCATCAGATACCCTCTCACAAAATTGGAGTGTTAACTCTCTAAGCGATTTACAGTTCTCAGCAAAAGATATCAATGCTTTGTCTCCTATCTCATAACCACGCCGAATAGAAAGTTCAGTCAAGTTCTTGCAACCTTGAGCTATGTAGCACAAGGCATCATCACTTATT ] [-] EMBL CB645753 [ CGATAGTCGCTATTCCTGTGCTGCTCACTCGCTTGCAGTACACCATCTGGCATGACTGCAGCGGCAGGCAGCCCCTGACAAGGTGGCCTAGACCAACATCAGTGACCTCTGGACAGTGGGACAGCGCGATATCTTTAAGCTGCGAGCAACCTTCACCGATCTCCGCAAGCGCCATGTCTCCTATGGACCGGAGAACACTTATATCCAAGTAGACCAGATCAGGGCATCCTCTTGCAATTGCAGTGAGCCCATTATCAGTGATTAGTTGGCATCCACACAAGTTTAACTTTCGAAGAGGACAGCCTTCAGCAATTGCAGTCAGCCCTGCATCAGATACCCTCTCACAAAATTGGAGTGTTAACTCTCTAAGCGATTTACAGTTCTCAGCAAAAGATATCAATGCTTTGTCTCCTATCTCATAACCACGCCGAATAGAAAGTTCAGTCAAGTTCTTGCAACCTTGAGCTATGTAGCACAAGGCATCATCACTTATTCTGGAACAGTCGACCAAATAAAGAGACCTGAGAAGGGAGCAACCTCTACCAACCTCCAGAAATGCACTGTCCTGGATCCTTGGACAATAAATTAGAGATAATTCCAAAAGACCCGGGCACCAACGTCCAATGTGCTCCAGTGCAGCAGTTTCCATATTCTGACAACCATTGATCTTCAGGCGTGCTAATTTTTTGCAGCTACGAGCTACAAATTCAAGGCTTCTATCAGTTAGTAAATGGCAGTCATTGAGAATAAGATCTGTGAGATTCTTGCACCCTTTGGCAAT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||