These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8147#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1727 fasta sequence [AAAACGAGCCCCCAAATCCCAGAGAGGAGTCGCGAGCTTTTCATCAATCCTCTGATTTTCCCCCAGGTTTCCCCACCCGCAAAGAGCCTCAAAATTCCCCCTCCTCTGTCGCGACCGATCGCG-ACGACGGCGCCGGACGAGCAGACACCGCCGCCACGATGCCGCCCTCCACCGGCTCCGTCCCACCCGCCGCATCAACGCCGGCGGCTGGGGACGAGGCCACCGCCGCCGGGAGGGTACTCCTCGGCAGGTACGAGCTCGGCGGCCTCCTCGGCCGCGGCGCCTCCGCCAAGGTGTACCTCGCCCGCGACCTCCTCACCGGCCGCGACGTCGCCATCAAGTCCTTCCCCAACCCCCGCCACGGCGGCGGCCTCCGCGGCGGCGAGGAGGATGTCCTCCTCCGCCCCGCGCCCATCGAGCGGGAGGCGGCCATTCTCCCCAGGCTGCGCCACCGCCACGTGATGCGCCTCCGCGAGATTCTGGCCACGCGCAAGAAGGTCCACTTCGTCCTCGACCTCGCCGCCGGCGGCGAGCTCTTCTCCCTGCTCGACGCGTCCGGCCGCATGACGGAGGACCTCGCGCGGCACTACTTCCGGCAGCTCATCTCCGCCGTCCGGTACTGCCACTCCCGTGGCGTGTACCACCGCGACATCAAGCCGGAGAACCTCCTCCTCGACGACGCGGGCGACCTCAAGGTGGCCGACTTCGGCCTCGGCGCCGTCGCCGACGGCGCCCTCCACCACACCCTCTGCGGCACCCCGGCCTACGTGGCGCCGGAGATCCTGTCGAGGAAGGGGTACAACCCAGCGAAGGTGGACATCTGGTCCTGCGGCGTCGTCCTCTTCGTGCTCGCCGCGGGGTACCTCCCCTTCAACGACGCCAGCCTCGTCAACATGTACCGCAAGATCTACGCCGGCAAGTTCCGGTGCCCGGCCTGGTTCTCGCCGGAGCTCCGGTGCCTGGTCCGCCGCATCCTGGACCCCAACCCGGCGACCCGCATTGACACGGAGGAGATCATCACCCACCCGTGGTTCCGCCAGGACGCGAGCCACTTCGCGATGGCGCAGCTGATGCAGCACGGCCACGACGAGGAGGCCAAATTCAAGACCGAGTTCAAGGAGGACGACATGGCCCGGGACATGACGGCGTTCGACATACTCGCATGCTCCCCTGGCTCCGACCTCTCCGGCCTCTTCGGCGCCGAGCCGGG-GAAGGAGCGGGTGTTCGTCGGCGAGCCGGCGGCGGCGGTGCTATCCCGAGTGGAGGAGGCCGGGAAGAAGGAAGGGTACATGGTAACGAGAGAAGGGAAGAAGGGCACCGGGCCGGTGTACGTGAAAGGCGAGAACGGCGGCATTGTGGCCAAGGTCTGCGTGTTCAAGATCGCCGACGCGGTGTCC-GTCGTCG-AGGTGGTGAAAGGCTACGGCGCCGAGGCCG-CCCGGTTCTGGAAGGCCAGGCTCGAGCCGGCGATGAAGCCTCCGGCAGCCATCTGAGCTGCCGACGAGAGGGTGAGCTGGTTCGTTGCCGCGTGCTTG--CAAATTGCA-ATCGAGATTTGTTCTTGTGTTGTTCAGTGTAACCGTGTGAGTGATGTCTCCCGTCGGCGAATTGTTTGGGTTTTTTTGGGATGTATTTGTTCATGGACGGCGTCATGGAGGTGGTATGTAAGCACGATTTGGTGATGTCTGGGCTGGAAAATAAGAGGCAAAAAATTCCCTGCTCCTAAAGGGAAA] [+] EMBL AK111746 [AAAACGAGCCCCCAAATCCCAGAGAGGAGTCGCGAGCTTTTCATCAATCCTCTGATTTTCCCCCAGGTTTCCCCACCCGCAAAGAGCCTCAAAATTCCCCCTCCTCTGTCGCGACCGATCGCG ACGACGGCGCCGGACGAGCAGACACCGCCGCCACGATGCCGCCCTCCACCGGCTCCGTCCCACCCGCCGCATCAACGCCGGCGGCTGGGGACGAGGCCACCGCCGCCGGGAGGGTACTCCTCGGCAGGTACGAGCTCGGCGGCCTCCTCGGCCGCGGCGCCTCCGCCAAGGTGTACCTCGCCCGCGACCTCCTCACCGGCCGCGACGTCGCCATCAAGTCCTTCCCCAACCCCCGCCACGGCGGCGGCCTCCGCGGCGGCGAGGAGGATGTCCTCCTCCGCCCCGCGCCCATCGAGCGGGAGGCGGCCATTCTCCCCAGGCTGCGCCACCGCCACGTGATGCGCCTCCGCGAGATTCTGGCCACGCGCAAGAAGGTCCACTTCGTCCTCGACCTCGCCGCCGGCGGCGAGCTCTTCTCCCTGCTCGACGCGTCCGGCCGCATGACGGAGGACCTCGCGCGGCACTACTTCCGGCAGCTCATCTCCGCCGTCCGGTACTGCCACTCCCGTGGCGTGTACCACCGCGACATCAAGCCGGAGAACCTCCTCCTCGACGACGCGGGCGACCTCAAGGTGGCCGACTTCGGCCTCGGCGCCGTCGCCGACGGCGCCCTCCACCACACCCTCTGCGGCACCCCGGCCTACGTGGCGCCGGAGATCCTGTCGAGGAAGGGGTACAACCCAGCGAAGGTGGACATCTGGTCCTGCGGCGTCGTCCTCTTCGTGCTCGCCGCGGGGTACCTCCCCTTCAACGACGCCAGCCTCGTCAACATGTACCGCAAGATCTACGCCGGCAAGTTCCGGTGCCCGGCCTGGTTCTCGCCGGAGCTCCGGTGCCTGGTCCGCCGCATCCTGGACCCCAACCCGGCGACCCGCATTGACACGGAGGAGATCATCACCCACCCGTGGTTCCGCCAGGACGCGAGCCACTTCGCGATGGCGCAGCTGATGCAGCACGGCCACGACGAGGAGGCCAAATTCAAGACCGAGTTCAAGGAGGACGACATGGCCCGGGACATGACGGCGTTCGACATACTCGCATGCTCCCCTGGCTCCGACCTCTCCGGCCTCTTCGGCGCCGAGCCGGG GAAGGAGCGGGTGTTCGTCGGCGAGCCGGCGGCGGCGGTGCTATCCCGAGTGGAGGAGGCCGGGAAGAAGGAAGGGTACATGGTAACGAGAGAAGGGAAGAAGGGCACCGGGCCGGTGTACGTGAAAGGCGAGAACGGCGGCATTGTGGCCAAGGTCTGCGTGTTCAAGATCGCCGACGCGGTGTCC GTCGTCG AGGTGGTGAAAGGCTACGGCGCCGAGGCCG CCCGGTTCTGGAAGGCCAGGCTCGAGCCGGCGATGAAGCCTCCGGCAGCCATCTGAGCTGCCGACGAGAGGGTGAGCTGGTTCGTTGCCGCGTGCTTG CAAATTGCA ATCGAGATTTGTTCTTGTGTTGTTCAGTGTAACCGTGTGAGTGATGTCTCCCGTCGGCGAATTGTTTGGGTTTTTTTGGGATGTATTTGTTCATGGACGGCGTCATGGAGGTAGTATGTAAGCACGATTTGGTGATGTCTGGGCTGGAAAATAAGAGGCAAAAA ] [+] EMBL AA754545 [ cnCCACCCTCAAAGAGCCTCAAAATTCCCCCTCCNNTGTCTNNACCGATNNCGNACTACGGCGNCGGACNANCAGACACCGCCGCCACGATGCCGCCCTCCACCGGCTCCGTCCCACCCGCCGCATCAACGCCGGCGGCTGGGGACGANGCCACCGCCGCCGGGAGGGTNCTCCTCGGCAGGTACGANCTCGGCGGCCTCCTCGGCCGCGGCGCCTCCGCCAAGGTGTNCCTCGCCCGCGACCTCCTCACCGGCCGCGACGTCGCCATCAAGTCNTTCTTTTTNCCCCGCCACGGCGGCGGCCTCCGCGGCGGCGANGANGATGTCCTCCTCCGCCCCGCGCCCATCGAGCGGGAGGCGGCCATTCTCCCCAGGCTGCGCCACCGCCACGTGATGCGCCTCCGCGAGATTCTGGCCACGCGCAAGAANGTCCACTTCGTCCTCGACCTCGCCGCCGGCGGCGANCTCTTCTCCCTGCTCGAC C TCCGGCCGCATGACGGAAGA CTC CGCGGNACTNCTTCCGGCAGCTCATC ] [-] EMBL CB668129 [ CCGGCGACCCGCATTGACACGGAGGAGATCATCACCCACCCGTGGTTCCGCCAGGACGCGAGCCACTTCGCGATGGCGCAGCTGATGCAGCACGGCCACGACGAGGAGGCCAAATTCAAGACCGAGTTCAAGGAGGACGACATGGCCCGGGACATGACGGCGTTCGACATACTCGCATGCTCCCCTGGCTCCGACCTCTCCGGCCTCTTCGGCGCCGAGCCGGG GAAGGAGCGGGTGTTCGTCGGCGAGCCGGCGGCGGCGGTGCTATCCCGAGTGGAGGAGGCCGGGAAGAAGGAAGGGTACATGGTAACGAGAGAAGGGAAGAAGGGCACCGGGCCGGTGTACGTGAAAGGCGAGAACGGCGGCATTGTGGCCAAGGTCTGCGTGTTCAAGATCGCCGACGCGGTGTCC GTCGTCG AGGTGGTGAAAGGCTACGGCGCCGAGGCCG CCCGGTTCTGGAAGGCCAGGCTCGAGCCGGCGATGAAGCCTCCGGCAGCCATCTGAGCTGCCGACGAGAGGGTGAGCTGGTTCGTTGCCGCGTGCTTG CAAATTGCA ATCGAGATTTGTTCTTGTGTTGTTCAGTGTAACCGTGTGAGTGATGTCTCCCGTCGGCGAATTGTTTGGGTTTTTTTGGGATGTATTTGTTCATGGACGGCGTCATGGAGGTGGTATGTAAGCACGATTTGGTGATGTTAGGGGTGGAAAATAAGAGGCAAAAAATTCCCTGCTCCTAAAGGG ] [+] EMBL OSC338 [ AAATTCAAGACCGAGTTCAAGGAGGACGACATGGCCCGGGACATGACGGCGTTCGACATACTCGCATGCTCCCCTGGCTCCGACCTCTCCGGCCTCTTCGGCGCCGAGCCGGGNGAAGGAGCGGGTNTTCGTCGGCGAGCCGGCGGCGNCGGTGCTATCCCGAGTGGAGGAGGCCGGGAAGAAGGAAGGGTACATGGTAACGAGAGAAGGGAAGAAGGGCACCGNGCCGGTGTACGTNAAAGGCGAGAACGGCGGCATTNTGGCCAAGGTCTGCNTGTTCAAGATCGCCGACGCGGTGTNC GTCGTCGAAGGTGGTGAAA ] [+] EMBL BI813590 [ tattTCCCGA TGGAGGA GCCGGGAAGAAGGAAGGGTACATGGTAACGAGAGAAGGGAAGAAGGGCACCGGGCCGGTGTACGTGAAAGGCGAGAACGGCGGCATTGTGGCCAAGGTCTGCGTGTTCAAGATCGCCGACGCGGTGTCCAGTCGTCG AGGTGGTGAAAGGCTACGGCGCCGAGGCCGCCCCGGTTCTGGAAGGCCAGGCTCGAGCCGGCGATGAAGCCTCCGGCAGCCATCTGAGCTGCCGACGAGAGGGTGA CTGGTTCGTTGCCGCGTGCTTGCACAAATTGCACATCGAGATTTGTTCTTGTGTTGTTCAGTGTAACCGTGTGAGTGATGTCTCCCGTCGGCGAATTGTTTGGGTTTTTTTGGGATGTATTTGTTCATGGACGGCGTCATGGAGGTGGTATGTAAGCCCGATTTGGTGATGTCTGGGCTGGAAAATAAGAGGCCAAAAATTCCCTGCTCCAAAAaaaaaa] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||