cluster # 8165

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Oryza sativa
cluster # 8165 cluster # 8165 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8165#0 length = 1451 sequences # 5
consensusID : consensus_8165#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1451
fasta sequence
                              [TCGAGACAGACGCAGACGCAGAGCCGACCGAGCGGCGGCCGAGCCGAGCCGAATCGAATCGAATCGAATCGAAACCCTCCTCCTTCCAATCCAGGCGGCGGCGGCGGCGGCGATCGCCGGCGGCATGAACAAGCGGCCCCGCGACGAGCCCTCCTCCTCCTTCGCCTCCGCCCCCAAGCGCCAGTACGGCGCAGGCGGCGGAGGGTATGGGGGGCATGGGTACTCGGAGGAGCGGAGCAGCGCGCGGCGGGTGGCGGACCACTACAGCGCGAGGTCGAACCAGACGCTCGAGGAGCGGGAGAACAGCCCCATCATCCACCTCAAGAAGCTCAACAACTGGATTAAGAGTGTTCTGATCCAGCTCTACGCACACCCCGGAGACTGCGTTCTTGATCTGGCTTGTGGAAAGGGAGGTGACTTGATAAAGTGGGACAAAGCCAAGGTTGGATATTATGTAGGAGTTGATATCGCCGAAGGCTCGATAAAAGATTGCATGACTCGCTATAATGGTGACACTGATCAACAACGAAGGAAGAAGTTCAGTTTTCCTGCACGGCTTATTTGTGCTGATTGTTACGAGGCTCGTTTGGATGAGCATTTATATGAGGATGCTCCGTTTGACATATGTAGCTGCCAGTTTGCGTTACATTACTCATGGTCAACTGAAGCACGTGCAAGACAAGCCCTAGCTAATGTATCTGCTTTGCTTCGTCCTGGAGGAGTTTTCATTGGGACAATGCCTGATGCTAATGTCATCATCAAAAGGCTTAGAGAAACTGATGGCATGGAATTTGGGAATGGTGTTTACTGGATTAGTTTTGGCGAAGAGTATGCTGAAAAGAAATTCCCCGCATCCAGACCTTTCGGTATCAAATACAAGTTTCACTTAGAGGATGCTGTTGATTGCCCGGAATGGGTTGTTCCATTCCATCTCTTCAAATTGCTGGCAGAGGAGTATGACCTGGAGTTGGTTCTGACGAAAAACTTCCATGAATTTGTACACGAGTACTTGCAAAAGCCAGAGTTTGCTGAGCTCATGCGGAGGCTGGGTGCCCTAGGTGATGGAAGGCAGGACCAAAGTACACTGTCACAGGATGAATGGGAGGTAGCCTATCTCTACCTCGCATTTGTTTTGCGCAAGAGAGGCCAACCCCCCTCCCAGCGGAGGGCCAACAATGCAAACAGAGGAAAGATGTTTCTCACTGAGAACGACATCGATTTCCTTGGGGTATAAAGCAAACAGAACTGTACTCTAGAGCTTACTAACAACTTACCGATTCAATGCTTCATACAGCATAAAAAGAAGAAAGTTGTACCTTTAGTAGCTCACCAGTTATTCCTCGAAGCTGTACCTGTTGTATACTAAATGTATAAACCCTATAAGGACTCTTGATGCAATTTTGCAGAAATGAATGAAATGAATAATAGGTCCCGTTNNAAAAAAAAAANAN]

[+] EMBL AK103587             [TCGAGACAGACGCAGACGCAGAGCCGACCGAGCGGCGGCCGAGCCGAGCCGAATCGAATCGAATCGAATCGAAACCCTCCTCCTTCCAATCCAGGCGGCGGCGGCGGCGGCGATCGCCGGCGGCATGAACAAGCGGCCCCGCGACGAGCCCTCCTCCTCCTTCGCCTCCGCCCCCAAGCGCCAGTACGGCGCAGGCGGCGGAGGGTATGGGGGGCATGGGTACTCGGAGGAGCGGAGCAGCGCGCGGCGGGTGGCGGACCACTACAGCGCGAGGTCGAACCAGACGCTCGAGGAGCGGGAGAACAGCCCCATCATCCACCTCAAGAAGCTCAACAACTGGATTAAGAGTGTTCTGATCCAGCTCTACGCACACCCCGGAGACTGCGTTCTTGATCTGGCTTGTGGAAAGGGAGGTGACTTGATAAAGTGGGACAAAGCCAAGGTTGGATATTATGTAGGAGTTGATATCGCCGAAGGCTCGATAAAAGATTGCATGACTCGCTATAATGGTGACACTGATCAACAACGAAGGAAGAAGTTCAGTTTTCCTGCACAGCTTATTTGTGCTGATTGTTACGAGGCTCGTTTGGATGAGCATTTATATGAGGATGCTCCGTTTGACATATGTAGCTGCCAGTTTGCGTTACATTACTCATGGTCAACTGAAGCACGTGCAAGACAAGCCCTAGCTAATGTATCTGCTTTGCTTCGTCCTGGAGGAGTTTTCATTGGGACAATGCCTGATGCTAATGTCATCATCAAAAGGCTTAGAGAAACTGATGGCATGGAATTTGGGAATGGTGTTTACTGGATTAGTTTTGGCGAAGAGTATGCTGAAAAGAAATTCCCCGCATCCAGACCTTTCGGTATCAAATACAAGTTTCACTTAGAGGATGCTGTTGATTGCCCGGAATGGGTTGTTCCATTCCATCTCTTCAAATTGCTGGCAGAGGAGTATGACCTGGAGTTGGTTCTGACGAAAAACTTCCATGAATTTGTACACGAGTACTTGCAAAAGCCAGAGTTTGCTGAGCTCATGCGGAGGCTGGGTGCCCTAGGTGATGGAAGGCAGGACCAAAGTACACTGTCACAGGATGAATGGGAGGTAGCCTATCTCTACCTCGCATTTGTTTTGCGCAAGAGAGGCCAACCCCCCTCCCAGCGGAGGGCCAACAATGCAAACAGAGGAAAGATGTTTCTCACTGAGAACGACATCGATTTCCTTGGGGTATAAAGCAAACAGAACTGTACTCTAGAGCTTACTAACAACTTACCGATTCAATGCTTCATACAGCATAAAAAGAAGAAAGTTGTACCTTTAGTAGCTCACCAGTTATTCCTCGAAGCTGTACCTGTTGTATACTAAATGTATAAACCCTATAAGGACTCTTGATGCAATTTTGCAGAAATGAATGAGATGAATAATAGGTCCCGT                ]
[+] EMBL AK063927             [                                      CCGAGCCGAGCCGAATCGAATCGAATCGAATCGAAACCCTCCTCCTTCCAATCCAGGCGGCGGCGGCGGCGGCGATCGCCGGCGGCATGAACAAGCGGCCCCGCGACGAGCCCTCCTCCTCCTTCGCCTCCGCCCCCAAGCGCCAGTACGGCGCAGGCGGCGGAGGGTATGGGGGGCATGGGTACTCGGAGGAGCGGAGCAGCGCGCGGCGGGTGGCGGACCACTACAGCGCGAGGTCGAACCAGACGCTCGAGGAGCGGGAGAACAGCCCCATCATCCACCTCAAGAAGCTCAACAACTGGATTAAGAGTGTTCTGATCCAGCTCTACGCACACCCCGGAGACTGCGTTCTTGATCTGGCTTGTGGAAAGGGAGGTGACTTGATAAAGTGGGACAAAGCCAAGGTTGGATATTATGTAGGAGTTGATATCGCCGAAGGCTCGATAAAAGATTGCATGACTCGCTATAATGGTGACACTGATCAACAACGAAGGAAGAAGTTCAGTTTTCCTGCACGGCTTATTTGTGCTGATTGTTACGAGGCTCGTTTGGATGAGCATTTATATGAGGATGCTCCGTTTGACATATGTAGCTGCCAGTTTGCGTTACATTACTCATGGTCAACTGAAGCACGTGCAAGACAAGCCCTAGCTAATGTATCTGCTTTGCTTCGTCCTGGAGGAGTTTTCATTGGGACAATGCCTGATGCTAATGTCATCATCAAAAGGCTTAGAGAAACTGATGGCATGGAATTTGGGAATGGTGTTTACTGGATTAGTTTTGGCGAAGAGTATGCTGAAAAGAAATTCCCCGCATCCAGACCTTTCGGTATCAAATACAAGTTTCACTTAGAGGATGCTGTTGATTGCCCGGAATGGGTTGTTCCATTCCATCTCTTCAAATTGCTGGCAGAGGAGTATGACCTGGAGTTGGTTCTGACGAAAAACTTCCATGAATTTGTACACGAGTACTTGCAAAAGCCAGAGTTTGCTGAGCTCATGCGGAGGCTGGGTGCCCTAGGTGATGGAAGGCAGGACCAAAGTACACTGTCACAGGATGAATGGGAGGTAGCCTATCTCTACCTCGCATTTGTTTTGCGCAAGAGAGGCCAACCCCCCTCCCAGCGGAGGGCCAACAATGCAAACAGAGGAAAGATGTTTCTCACTGAGAACGACATCGATTTCCTTGGGGTATAAAGCAAACAGAACTGTACTCTAGAGCTTACTAACAACTTACCGATTCAATGCTTCATACAGCATAAAAAGAAGAAAGTTGTACCTTTAGTAGCTCACCAGTTATTCCTCGAAGCTGTACCTGTTGTATACTAAATGTATAAACCCTATAAGGACTCTTGATGCAATTTTGCAGAAATGAATGAAATGAATAATAGGTCCCGT                ]
[+] EMBL CB685359             [                                                   AATCCTTTCGAATCGAATCGAAACCCTCCTCCTTCCAATCCAGGCGGCGGCGGCGGCGGCGATCGCCGGCGGCATGAACAAGCGGCCCCGCGACGAGCCCTCCTCCTCCTTCGCCTCCGCCCCCAAGCGCCAGTACGGCGCAGGCGGCGGAGGGTATGGGGGGCATGGGTACTCGGAGGAGCGGAGCAGCGCGCGGCGGGTGGCGGACCACTACAGCGCGAGGTCGAACCAGACGCTCGAGGAGCGGGAGAACAGCCCCATCATCCACCTCAAGAAGCTCAACAACTGGATTAAGAGTGTTCTGATCCAGCTCTACGCACACCCCGGAGACTGCGTTCTTGATCTGGCTTGTGGAAAGGGAGGTGACTTGATAAAGTGGGACAAAGCCAAGGTTGGATATTATGTAGGAGTTGATATCGCCGAAGGCTCGATAAAAGATTGCATGACTCGCTATAATGGTGACACTGATCAACAACGAAGGAAGAAGTTCAGTTTTCCTGCACGGCTTATTTGTGCTGATTGTTACGAGGCTCGTTTGGATGAGCATTTATATGAGGATGCTCCGTTTGACATATGTAGCTGCCAGTTTGCGTTACATTACTCATGGTCAACTGAAGCACGTGCAAGACAAGCCCTAGCTAATGTATCTGCTTTGCTTCGTCCTGGAGGAGTTTTCATTGGGACAATGCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA757918             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCTGATGCTAATGTCATCATCAAAAGGCTTAGAGAAACTGATGGCATGGAATTTGGGAACGGTGTTTACTGGATTAGTTTTGGCGAAGAGTATGCTGAAAAGAAATTCCCTGCATCCAGACCTTTCGGTATCAAATACAAGTTTCACTTAGAGGATGCTGTTGATTGCCCGGAATGGGTTGTTCCATTCCATCTCTTCAAATTGCTGGCAGAGGAGTATGACCTGGAGTTGGTTCTGACGAAAAACTTCCATGAATTTGTACACGAGTACTTGCAAAAGCCAGAGTTTGCTGAGCTCATGCGGAGGCTGGGTGCCCTAGGTGATGGAAGGCAGGACCAAAGTACACTGTCACAGGATGAATGGGAGGTAGCCTATCTCTACCTCGCATTTGTTTTGCGCAAGAGAGGCCAACCCCCCTCCCAGCGGAGGGCCAACAATGCAAACAGAGGAAAGATGTTTCTCACTGAGAACGACATCGATTTCCTTGGGGTATAAAGCAAACAGAACTGTACTCTAGAGCTTACTAACAACTTACCGATTCAATGCTTCATACAGCATAAAAAGAAGAAAGTTGTACCTTTAGTAGCTCACCAGTTATTCCTCGAAGCTGTACCTGTTGTATACTAAATGTATAAACCCTATAANGACTCTTGATGCAATTTTGCAGAAATGAATGAAATGAATAATAGGTCCCNGTNNAAAAAAAAAANAN]
[-] EMBL CB685360             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CATCAAAAGGCTTAGAGAAACTGATGGCATGGAATTTGGGAATGGTGTTTACTGGATTAGTTTGGGCGAAGAGTATGCTGAAAAGAAATTCCCCGCATCCAGACCTTTCGGTATCAAATACAAGTTTCACTTAGAGGATGCTGTTGATTGCCCGGAATGGGTTGTTCCATTCCATCTCTTCAAATTGCTGGCAGAGGAGTATGACCTGGAGTTGGTTCTGACGAAAAACTTCCATGAATTTGTACACGAGTACTTGCAAAAGCCAGAGTTTGCTGAGCTCATGCGGAGGCTGGGTGCCCTAGGTGATGGAAGGCAGGACCAAAGTACACTGTCACAGGATGAATGGGAGGTAGCCTATCTCTACCTCGCATTTGTTTTGCGCAAGAGAGGCCAACCCCCCTCCCAGCGGAGGGCCAACAATGCAAACAGAGGAAAGATGTTTCTCACTGAGAACGACATCGATTTCCTTGGGGTATAAAGCAAACAGAACTGTACTCTAGAGCTTACTAACAACTTACCGATTCAATGCTTCATACAGCATAAAAAGAAGAAAGTTGTACCTTTAGTAGCTCACCAGTTATTCCTCGAAGCTGTACCTGTTGTATACTAAATGTATAAACCCTATAAGGACTCTTGATGCAATTTTGCAGAGAGGAATGAAATGAATAATA                        ]




>consensus_8165#0
TCGAGACAGACGCAGACGCAGAGCCGACCGAGCGGCGGCCGAGCCGAGCCGAATCGAATC
GAATCGAATCGAAACCCTCCTCCTTCCAATCCAGGCGGCGGCGGCGGCGGCGATCGCCGG
CGGCATGAACAAGCGGCCCCGCGACGAGCCCTCCTCCTCCTTCGCCTCCGCCCCCAAGCG
CCAGTACGGCGCAGGCGGCGGAGGGTATGGGGGGCATGGGTACTCGGAGGAGCGGAGCAG
CGCGCGGCGGGTGGCGGACCACTACAGCGCGAGGTCGAACCAGACGCTCGAGGAGCGGGA
GAACAGCCCCATCATCCACCTCAAGAAGCTCAACAACTGGATTAAGAGTGTTCTGATCCA
GCTCTACGCACACCCCGGAGACTGCGTTCTTGATCTGGCTTGTGGAAAGGGAGGTGACTT
GATAAAGTGGGACAAAGCCAAGGTTGGATATTATGTAGGAGTTGATATCGCCGAAGGCTC
GATAAAAGATTGCATGACTCGCTATAATGGTGACACTGATCAACAACGAAGGAAGAAGTT
CAGTTTTCCTGCACGGCTTATTTGTGCTGATTGTTACGAGGCTCGTTTGGATGAGCATTT
ATATGAGGATGCTCCGTTTGACATATGTAGCTGCCAGTTTGCGTTACATTACTCATGGTC
AACTGAAGCACGTGCAAGACAAGCCCTAGCTAATGTATCTGCTTTGCTTCGTCCTGGAGG
AGTTTTCATTGGGACAATGCCTGATGCTAATGTCATCATCAAAAGGCTTAGAGAAACTGA
TGGCATGGAATTTGGGAATGGTGTTTACTGGATTAGTTTTGGCGAAGAGTATGCTGAAAA
GAAATTCCCCGCATCCAGACCTTTCGGTATCAAATACAAGTTTCACTTAGAGGATGCTGT
TGATTGCCCGGAATGGGTTGTTCCATTCCATCTCTTCAAATTGCTGGCAGAGGAGTATGA
CCTGGAGTTGGTTCTGACGAAAAACTTCCATGAATTTGTACACGAGTACTTGCAAAAGCC
AGAGTTTGCTGAGCTCATGCGGAGGCTGGGTGCCCTAGGTGATGGAAGGCAGGACCAAAG
TACACTGTCACAGGATGAATGGGAGGTAGCCTATCTCTACCTCGCATTTGTTTTGCGCAA
GAGAGGCCAACCCCCCTCCCAGCGGAGGGCCAACAATGCAAACAGAGGAAAGATGTTTCT
CACTGAGAACGACATCGATTTCCTTGGGGTATAAAGCAAACAGAACTGTACTCTAGAGCT
TACTAACAACTTACCGATTCAATGCTTCATACAGCATAAAAAGAAGAAAGTTGTACCTTT
AGTAGCTCACCAGTTATTCCTCGAAGCTGTACCTGTTGTATACTAAATGTATAAACCCTA
TAAGGACTCTTGATGCAATTTTGCAGAAATGAATGAAATGAATAATAGGTCCCGTTNNAA
AAAAAAAANAN
clustalw multiple alignements is not computed in this case