These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8172#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2507 fasta sequence [TTTCGCACAACAGAATACCAGCAAAGAATCCAAGATTATCCAGGCATCGCTCATGAAACCATTCATCCACAGAGCAGCTGCTTTGCTATGTCTCGCCGTAGCAACTGCGGTGTGTCTCTCCTCCGTCACAGCGATGTCCTGCCAGAGAAAATGCGGTGACATCGAAGTTCCTTTTCCATTCGGCATAGACGGTGATCAGCCTGGCTGTGCCAAGCCGGGCTTTGAGCTGAGCTGCGGCAACAACACGGAGAGTGGTGTACCGATTCTCCTCCGCAAAGTGCAGCCCCTTAGCAGGAGCGTGGAGGTGCTCGGCATCTCCTTGCCGAAAGGCCAGCTCCGGATGAGGATGCATATGTCCTCTCACTGCTACAACATGACCACTCGTGTCATGGACTGCGTCGACAACGGGTGGATGGACTTGACGGGGAGTCCCTTCACCTTCTCCGACAGCGCGAACAAGTTCACGGCCTTTGGGTGCCAAGTTCTTGCATATCTTGGGGCGGGCGAACAGAGGGACATAGGAAGCAACCTAAGAATTGGCTGCGCGGCCAGTTGTGGCAAGGATGATTCTGCCACTATCGGTGGTGGTAGATGCTCTGGGATAGGCTGCTGCCAGACGGCTATCCCAAAGGGGATAAAGTATTATAAGGCATGGTTTGATGACCGCTTCAACACGTCTTCCATGTACACATGGAACCGTTGTGCCTATGCAGCGCTCGTGGAGGAGTCCAGCTTCAATTTCTCCATGATTTACGATTCATCATCGAAGTTCAACAGCGATACCGTCTCTAGTCAGCCGCCGTTTGTGGTTGACTGGGTTATGGGAAATATATCATGCAAAGAAGCTCGTAAAAATCTAGGTACCTACCCATGCATCAGCAACAACAGCATTTGTTTGGACTCACAGAATGGACCGGGTTACATTTGCAACTGCAGAAAGGGGTTCCAGGGTAACCCTTACAATAAAGGTCTTGACAGCTGCCAAGATATTAATGAGTGTGACGATCCTAAGAAGTACCCCTGCTATGGTAAATGCATTAACAAACTTGGAGGATTTGATTGTTTCTGCCCTGCGGGAATGAGAGGAAATGCATCTGTTGGACCATGCCGGAAAGATTTCCCACTGGGAATTGGTATTGCAATTGGTTTGGGTGTTGGTTTCGGAATTCTCCTACTTAGCTTGTCTGTGGTGTTTCTTATCCGTAAACAGAGAAGCGACATCCAAAGGCAACTACGGAAAAAATATTTTCAGAAAAACAAAGGCCTTCTACTAGAACAACTAATATCTTCTGACGAAAGAGCTAGCGATAGCACAAAAATTTTCTCCCTAGAAGAGCTTAAAGAGGCAACTAATAACTTTGACCCAACACGTGTTCTCGGTAGTGGAGGTCATGGTATGGTTTACAAAGGTATCTTATCTGATCAACGTGTGGTGGCGATAAAAAAACCAAACATCATCAGGGAAGAGGAGATTAGCCAGTTTATCAATGAGGTTGTAATTCTCTCACAAATAAATCATCGCCATATTGTCAAACTCTTTGGATGCTGTCTTGAAACTGAAGTCCCTCTATTAGTGTATGATTTTGTACCTAATGGTTCACTAAATCAAATTATTCATGCTGATAAAAGTAACAGACGTTTCTCATTGTCCTGGGATGATTGTTTGCGAATTGCTACAGAAGCAGCAGGTGCTTTATATTACCTCCACTCTGCAGCATCGGTATCAGTTCTACATCGTGATGTGAAATCATCTAATATACTCTTGGATTCAAACTACACCGCTAAAGTTTCAGATTTTGGAGCTTCAAGATTGATTCCGAATGACCAAACCCATGTTTTCACAAATATACAAGGGACATTTGGATATTTAGATCCTGAGTACTACCATACTGGGCATCTCAATGAGAAAAGTGATGTGTATAGTTTTGGTGTAGTTCTTTTAGAGCTGCTTCTAAGAAGGCAACCTATTTTTGACGATGGCACTGGCACAAAGAAAAATCTATCAATATATTTTCTTTCTGAGATAAAAGGAAAGCCTATTACAGAGATAGTTGCCCCTGAAGTTATTAAGGAAGCAATAGAGGATGAGATTAATATTTTTGCCTCAATTGCACAGGCATGCTTGAGGCTCCGAGGTGAAGAAAGGCCAACAATGAAGCAAGTGGAGATATCATTACAGTCTATAAGAAACAAAGTTTTGAGTTCAGGCAGCGCTAGTTCCGAAAGCAACCATGAGATAGAAACACCCTTATGTGAAAGTTACGTTGATCTGCATCAAACTATGGGTGTTGATATCAATGGCATTGCTAATTTAATATCTTCAAATTGCTATAGCTTAGAGCATGAATTTATGTTATCCGCTAGCTTTGGAAGGTAAATTGTGTTTGTCCCGTTGTTGAAATGTCGATAGATGTTCTTATAGTATCTTTGTGCATTTGCACAATCTATAAGCTTGTCATAAACAGAAATGTTGAATATACATTTGTGATACATCATTAAAAAAAAGG] [+] EMBL AK111580 [TTTCGCACAACAGAATACCAGCAAAGAATCCAAGATTATCCAGGCATCGCTCATGAAACCATTCATCCACAGAGCAGCTGCTTTGCTATGTCTCGCCGTAGCAACTGCGGTGTGTCTCTCCTCCGTCACAGCGATGTCCTGCCAGAGAAAATGCGGTGACATCGAAGTTCCTTTTCCATTCGGCATAGACGGTGATCAGCCTGGCTGTGCCAAGCCGGGCTTTGAGCTGAGCTGCGGCAACAACACGGAGAGTGGTGTACCGATTCTCCTCCGCAAAGTGCAGCCCCTTAGCAGGAGCGTGGAGGTGCTCGGCATCTCCTTGCCGAAAGGCCAGCTCCGGATGAGGATGCATATGTCCTCTCACTGCTACAACATGACCACTCGTGTCATGGACTGCGTCGACAACGGGTGGATGGACTTGACGGGGAGTCCCTTCACCTTCTCCGACAGCGCGAACAAGTTCACGGCCTTTGGGTGCCAAGTTCTTGCATATCTTGGGGCGGGCGAACAGAGGGACATAGGAAGCAACCTAAGAATTGGCTGCGCGGCCAGTTGTGGCAAGGATGATTCTGCCACTATCGGTGGTGGTAGATGCTCTGGGATAGGCTGCTGCCAGACGGCTATCCCAAAGGGGATAAAGTATTATAAGGCATGGTTTGATGACCGCTTCAACACGTCTTCCATGTACACATGGAACCGTTGTGCCTATGCAGCGCTCGTGGAGGAGTCCAGCTTCAATTTCTCCATGATTTACGATTCATCATCGAAGTTCAACAGCGATACCGTCTCTAGTCAGCCGCCGTTTGTGGTTGACTGGGTTATGGGAAATATATCATGCAAAGAAGCTCGTAAAAATCTAGGTACCTACCCATGCATCAGCAACAACAGCATTTGTTTGGACTCACAGAATGGACCGGGTTACATTTGCAACTGCAGAAAGGGGTTCCAGGGTAACCCTTACAATAAAGGTCTTGACAGCTGCCAAGATATTAATGAGTGTGACGATCCTAAGAAGTACCCCTGCTATGGTAAATGCATTAACAAACTTGGAGGATTTGATTGTTTCTGCCCTGCGGGAATGAGAGGAAATGCATCTGTTGGACCATGCCGGAAAGATTTCCCACTGGGAATTGGTATTGCAATTGGTTTGGGTGTTGGTTTCGGAATTCTCCTACTTAGCTTGTCTGTGGTGTTTCTTATCCGTAAACAGAGAAGCGACATCCAAAGGCAACTACGGAAAAAATATTTTCAGAAAAACAAAGGCCTTCTACTAGAACAACTAATATCTTCTGACGAAAGAGCTAGCGATAGCACAAAAATTTTCTCCCTAGAAGAGCTTAAAGAGGCAACTAATAACTTTGACCCAACACGTGTTCTCGGTAGTGGAGGTCATGGTATGGTTTACAAAGGTATCTTATCTGATCAACGTGTGGTGGCGATAAAAAAACCAAACATCATCAGGGAAGAGGAGATTAGCCAGTTTATCAATGAGGTTGTAATTCTCTCACAAATAAATCATCGCCATATTGTCAAACTCTTTGGATGCTGTCTTGAAACTGAAGTCCCTCTATTAGTGTATGATTTTGTACCTAATGGTTCACTAAATCAAATTATTCATGCTGATAAAAGTAACAGACGTTTCTCATTGTCCTGGGATGATTGTTTGCGAATTGCTACAGAAGCAGCAGGTGCTTTATATTACCTCCACTCTGCAGCATCGGTATCAGTTCTACATCGTGATGTGAAATCATCTAATATACTCTTGGATTCAAACTACACCGCTAAAGTTTCAGATTTTGGAGCTTCAAGATTGATTCCGAATGACCAAACCCATGTTTTCACAAATATACAAGGGACATTTGGATATTTAGATCCTGAGTACTACCATACTGGGCATCTCAATGAGAAAAGTGATGTGTATAGTTTTGGTGTAGTTCTTTTAGAGCTGCTTCTAAGAAGGCAACCTATTTTTGACGATGGCACTGGCACAAAGAAAAATCTATCAATATATTTTCTTTCTGAGATAAAAGGAAAGCCTATTACAGAGATAGTTGCCCCTGAAGTTATTAAGGAAGCAATAGAGGATGAGATTAATATTTTTGCCTCAATTGCACAGGCATGCTTGAGGCTCCGAGGTGAAGAAAGGCCAACAATGAAGCAAGTGGAGATATCATTACAGTCTATAAGAAACAAAGTTTTGAGTTCAGGCAGCGCTAGTTCCGAAAGCAACCATGAGATAGAAACACCCTTATGTGAAAGTTACGTTGATCTGCATCAAACTATGGGTGTTGATATCAATGGCATTGCTAATT ] [+] EMBL CB633483 [ AAGATTCTCCAGACATCGCTCATGAAACCATTCATCCACAGAGCAGCTGCTTTGCTATGTCTCGCCGTAGCAACTGCGGTGTGTCTCTCCTCCGTCACAGCGATGTCCTGCCAGAGAAAATGCGGTGACATCGAAGTTCCTTTTCCATTCGGCATAGACGGTGATCAGCCTGGCTGTGCCAAGCCGGGCTTTGAGCTGAGCTGCGGCAACAACACGGAGAGTGGTGTACCGATTCTCCTCCGCAAAGTGCAGCCCCTTAGCAGGAGCGTGGAGGTGCTCGGCATCTCGTTGCCGAAAGGCCAGCTCCGGATGAGGATGCATATGTCCTCTCACTGCTACAACATGACCACTCGTGTCATGGACTGCGTCGACAACGGGTGGATGGACTTGACGGGGAGTCCCTTCACCTTCTCCGACAGCGCGAACAAGTTCACGGCCTTTGGGTGCCAAGTTCTTGCATATCTTGGGGCGGGTGAACAGAGGGACATAGGAAGCAACCTAAGAATTGGCTGCGCGGCCAGTTGTGGCAAGGATGATTCTGCCACTATCGGTGGTGGTAGATGCTCTGGGATAGGCTGCTGCCAGACGGCTATCCCAAAGGGGATAAAGTATTATAAGGCATGGTTTGATGACCGCTTCAACACGTCTTCCATGTACACATGGAACCGTTGTGCCTATGCAGCGCTCGTGGAGGAGTCCAGCTTCAATTTCTCCATGATTTACGATTCATCATCGAAGTTCAACAGCGATACCGTCTCTAGTCAGCCGCCGTTTGTGGTTGACTGGGTTATGGGAAA ] [-] EMBL CB674990 [ TTCCAGGGTAACCCTTACAATAAAGGTCTTGACAGCTGCCAAGATATTAATGAGTGTGACGATCCTAAGAAGTACCCCTGCTATGGTAAATGCATTAACAAACTTGGAGGATTTGATTGTTTCTGCCCTGCGGGAATGAGAGGAAATGCATCTGTTGGACCATGCCGGAAAGATTTCCCACTGGGAATTGGTATTGCAATTGGTTTGGGTGTTGGTTTCGGAATTCTCCTACTTAGCTTGTCTGTGGTGTTTCTTATCCGTAAACAGAGAAGCGACATCCAAAGGCAACTACGGAAAAAATATTTTCAGAAAAACAAAGGCCTTCTACTAGAACAACTAATATCTTCTGACGAAAGAGCTAGCGATAGCACAAAAATTTTCTCCCTAGAAGAGCTTAAAGAGGCAACTAATAACTTTGACCCAACACGTGTTCTCGGTAGTGGAGGTCATGGTATGGTTTACAAAGGTATCTTATCTGATCAACGTGTGGTGGCGATAAAAAAACCAAACATCATCAGGGAAGAGGAGATTAGCCAGTTTATCAATGAGGTTGTAATTCTCTCACAAATAAATCATCGCCATATTGTCAAACTCTTTGGATGCTGTCTTGAAACTGAAGTCCCTCTATTAGTGTATGATTTTGTACCTAATGGTTCACTAAATCAAATTATTCATGCTGATAAAAGTAACAGACGTTT ] [+] EMBL CB674989 [ TAACCCTTACAATAAAGGTCTTGACAGCTGCCAAGATATTAATGAGTGTGACGATCCTAAGAAGTACCCCTGCTATGGTAAATGCATTAACAAACTTGGAGGATTTGATTGTTTCTGCCCTGCGGGAATGAGAGGAAATGCATCTGTTGGACCATGCCGGAAAGATTTCCCACTGGGAATTGGTATTGCAATTGGTTTGGGTGTTGGTTTCGGAATTCTCCTACTTAGCTTGTCTGTGGTGTTTCTTATCCGTAAACAGAGAAGCGACATCCAAAGGCAACTACGGAAAAAATATTTTCAGAAAAACAAAGGCCTTCTACTAGAACAACTAATATCTTCTGACGAAAGAGCTAGCGATAGCACAAAAATTTTCTCCCTAGAAGAGCTTAAAGAGGCAACTAATAACTTTGACCCAACACGTGTTCTCGGTAGTGGAGGTCATGGTATGGTTTACAAAGGTATCTTATCTGATCAACGTGTGGTGGCGATAAAAAAACCAAACATCATCAGGGAAGAGGAGATTAGCCAGTTTATCAATGAGGTTGTAATTCTCTCACAAATAAATCATCGCCATATTGTCAAACTCTTTGGATGCTGTCTTGAAACTGAAGTCCCTCTATTAGTGTATGATTTTGTACCTAATGGTTCACTAAATCAAATTATTCATGCTGATAAAAGTAACA ] [-] EMBL CB633484 [ TTATATTACCTCCACTCTGCAGCATCGGTATCAGTTCTACATCGTGATGTGAAATCGTCTAATATACTCTTGGATTCAAACTACACCGCTAAAGTTTCAGATTTTGGAGCTTCAAGATTGATTCCGAATGACCAAACCCATGTTTTCACAAATATACAAGGGACATTTGGATATTTAGATCCTGAGTACTACCATACTGGGCATCTCAATGAGAAAAGTGATGTGTATAGTTTTGGTGTAGTTCTTTTAGAGCTGCTTCTAAGAAAGCAACCTATTTTTGACGATGGCACTGGCACAAAGAAAAATCTATCAATATATTTTCTTTCTGAGATAAAAGGAAAGCCTATTACAGAGATAGTTGCCCCTGAAGTTATTAAGGAAGCAATAGAGGATGAGATTAATATTTTTGCCTCAATTGCACAGGCATGCTTGAGGCTCCGAGGTGAAGAAAGGCCAACAATGAAGCAAGTGGAGATATCATTACAGTCTATAAGAAACAAAGTTTTGAGTTCAGGCAGCGCTAGTTCCGAAAGCAACCATGAGATAGAAACACCCTTATGTGAAAGTTACGTTGATCTGCATCAAACTATGGGTGTTGATATCAATGGCATTGCTAATTTAATATCTTCAAATTGCTATAGCTTAGAGCATGAATTTATGTTATCCGCTAGCTTTGGAAGGTAAATTGTGTTTGTCCCGTTGTTGAAATGTCGATAGATGTTCTTATAGTATCTTTGTGCATTTGCACAATCTATAAGCTTGTCATAAACAGAAATGTTGAATATACATTTGTGATACATCATTAAAAAAAAGG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||