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Oryza sativa
cluster # 8174 cluster # 8174       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8174#0 length = 2249 sequences # 4  
consensus_8174#1 length = 809 sequences # 1  

consensusID : consensus_8174#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2249
fasta sequence
                              [GAGAGAGAAGGAAGAACAGAGAGAGAGAGAGAGAGGAGGGAGAAGAAAAAAAATAATCGAAAATAAAATAAAATAAAGAGAGAGATAGAACCCCAGATCTCTCCACAGTTTCAACGCCTCAAATCTCTCAACTCTCGTCCCAATCCTTAGGTACACGCCTCCCTCTCTTTCCTCCAATTTTTGTTCGGAGGGAGGACGAATTTCAGTTCTTGTTTCTGTTTCGATCTCCAACCAAATCTGGCCCAAGAAAATTTGAGTTTCTTGTGTGGTAGATGCCACCAATGTGTGCCAAGCCCCTCTGAGATCTCACCGGCTGATCAGCTGATGTAGTTTGCAGTCGAATTTTGTTCCGTTTTTGGGGGCAAGATTGTGTTCTTGGAGCTGTAGATTGGTTATACATTTTTTTTTCCATTTCTTGGCTCAGTTTTGTCCATTCGACGAGGAATTTCTCGTCGTGTTTGTTGTTGATTGATTGATCCAATCTTTGATGCGCCAAGAAGCAAGATGAACACGAATTACTCGTCCCTCCCATTGACCTCCATCGAGCTCCAATCCAACCAGCGCACATCCGAGGTCGCCAATGGCGTCGGCTACAACGGCCACGCCAAGATCTCCAAGCAAGATTCGTTCCTGGTCGACGGCGAGAACGACGACCTGCCGCTCATCGGCGACGGCCCCGCCGGGCCACCCGAGGGCTCCGGCGTGCCCGCCGCGGTGTTCAACCTCGCCACCTCCATCATCGGCGCCGGCATTATGGCCCTCCCGGCCACCATGAAGGTTCTCGGCGTCGCCGTCGGCCTCGTCTCCATCCTGGTCATGGGGATCCTCTCCGAGGTCACCATTGAGCTGCTCGTGAGGTTCGCCGTGTACTGCCGCGCGCTGTCCTACGGCGAGGTGGTGCACAAGGCGCTCGGCCGTCCGGCGAGCATCGTGGCGCAGATGTGCGTCATCATCAACAATGCCGGCGTGCTCATCGTGTACCTCATCATCATCGGAGATGTGATGTCAGGGTCACTGAAGCACATTGGTGTCATGGATCAGTTGATCGGGCATGGCGAGTGGGATAACCGGAGGCTGCTGATCTTGGTGGTTCTTGTGATCTTTCTCTTCCCGTTGTGCGCGCTCGAGAAGATCGATTCGTTGAGCTTGTCGTCTGCTGCATCGGTCGCGCTTGCTGTCGTGTTTGTGGTTGTGTCATGCATCATTGCGCTGGTGAAGGTTGTTGAGGGTAAGATCAGTATGCCGAGGATGGGGCCGGATTTTAGCTCGAGGGCAGCAATGCTGGATTTGCTCGTCGTGATACCGATCATGACGAACGCCTACATCTGCCATTTCAATGTTCAGCCAATCTACAATGAGCTCAAGGAGAAGACACCTCACAACATGTACAAGATTGGGAGGATCACCACTGTGCTATGTGTTGTGGTATATGCACTGACTGCGGTCTCAGGGTACCTCTTGTTCGGCGAAGACACTGAATCTGATGTGCTCACCAACTTTGACAAGGATCTCGGGATCAGATTCAGCTCAATCCTCAACTTCATTGTCAGGATTGGGTATGTCATCCATCTGGTTCTCGTCTTCCCGGTTGTCCACTTCTCGCTTAGGCAGACGGTGGACTCGTTGATCTTTGGCGAGTTAGCGCCCCATAGCAGGAAAAAGATGCTCACCTTGACAGTGGTGCTCTTGGCACTCATCTATCTTGGCTCGACGATGATACCAAACATCTGGGTGGCCTTCAAGTTCACCGGTGCGACGACGGGGTTGGCACTGGGGTTCATTTTCCCGGCCCTTATTGCATTGAGATTGGACAAGGAAGGCAAGTCTTTAGGTAAGGGTGAGAGGCTCCTGTCAATTGTGATGCTTGGTTTGGCCATGGTTGTTAGCATTATTGGAGTAATTGGAAATGTATACAGCCTGAGGAGCAAGTCTGCATGATCTATCATGATGAACAATTTAGTAGGGTTAGTGCATTGCCATGGCAGTCATACAGACTGTATTAGCATGGTCAGATACAGAAGACAGCAGAGGTACTACTTGAGCAAAGCTCAGATACATTTTGTTTACCTTTAGAGGTGCAGGAGCATTTCTTGAAGGTTTTTGTTTTTGGGAGCTTGGACTAGATTGACAGATTCTTTGATGTATTTGCATTTATTGGTAAGGCAGCACAAGATGATAAGAAGCTGGTTGTGTTGTACTGCGAGGTTGTTGCCTGTCTACTACATGAAAAGAAAAGAAACGAATATGTT]

[+] EMBL AK070101             [GAGAGAGAAGGAAGAACAGAGAGAGAGAGAGAGAGGAGGGAGAAGAAAAAAAATAATCGAAAATAAAATAAAATAAAGAGAGAGATAGAACCCCAGATCTCTCCACAGTTTCAACGCCTCAAATCTCTCAACTCTCGTCCCAATCCTTAGGTACACGCCTCCCTCTCTTTCCTCCAATTTTTGTTCGGAGGGAGGACGAATTTCAGTTCTTGTTTCTGTTTCGATCTCCAACCAAATCTGGCCCAAGAAAATTTGAGTTTCTTGTGTGGTAGATGCCACCAATGTGTGCCAAGCCCCTCTGAGATCTCACCGGCTGATCAGCTGATGTAGTTTGCAGTCGAATTTTGTTCCGTTTTTGGGGGCAAGATTGTGTTCTTGGAGCTGTAGATTGGTTATACATTTTTTTTTCCATTTCTTGGCTCAGTTTTGTCCATTCGACGAGGAATTTCTCGTCGTGTTTGTTGTTGATTGATTGATCCAATCTTTGATGCGCCAAGAAGCAAGATGAACACGAATTACTCGTCCCTCCCATTGACCTCCATCGAGCTCCAATCCAACCAGCGCACATCCGAGGTCGCCAATGGCGTCGGCTACAACGGCCACGCCAAGATCTCCAAGCAAGATTCGTTCCTGGTCGACGGCGAGAACGACGACCTGCCGCTCATCGGCGACGGCCCCGCCGGGCCACCCGAGGGCTCCGGCGTGCCCGCCGCGGTGTTCAACCTCGCCACCTCCATCATCGGCGCCGGCATTATGGCCCTCCCGGCCACCATGAAGGTTCTCGGCGTCGCCGTCGGCCTCGTCTCCATCCTGGTCATGGGGATCCTCTCCGAGGTCACCATTGAGCTGCTCGTGAGGTTCGCCGTGTACTGCCGCGCGCTGTCCTACGGCGAGGTGGTGCACAAGGCGCTCGGCCGTCCGGCGAGCATCGTGGCGCAGATGTGCGTCATCATCAACAATGCCGGCGTGCTCATCGTGTACCTCATCATCATCGGAGATGTGATGTCAGGGTCACTGAAGCACATTGGTGTCATGGATCAGTTGATCGGGCATGGCGAGTGGGATAACCGGAGGCTGCTGATCTTGGTGGTTCTTGTGATCTTTCTCTTCCCGTTGTGCGCGCTCGAGAAGATCGATTCGTTGAGCTTGTCGTCTGCTGCATCGGTCGCGCTTGCTGTCGTGTTTGTGGTTGTGTCATGCATCATTGCGCTGGTGAAGGTTGTTGAGGGTAAGATCAGTATGCCGAGGATGGGGCCGGATTTTAGCTCGAGGGCAGCAATGCTGGATTTGCTCGTCGTGATACCGATCATGACGAACGCCTACATCTGCCATTTCAATGTTCAGCCAATCTACAATGAGCTCAAGGAGAAGACACCTCACAACATGTACAAGATTGGGAGGATCACCACTGTGCTATGTGTTGTGGTATATGCACTGACTGCGGTCTCAGGGTACCTCTTGTTCGGCGAAGACACTGAATCTGATGTGCTCACCAACTTTGACAAGGATCTCGGGATCAGATTCAGCTCAATCCTCAACTTCATTGTCAGGATTGGGTATGTCATCCATCTGGTTCTCGTCTTCCCGGTTGTCCACTTCTCGCTTAGGCAGACGGTGGACTCGTTGATCTTTGGCGAGTTAGCGCCCCATAGCAGGAAAAAGATGCTCACCTTGACAGTGGTGCTCTTGGCACTCATCTATCTTGGCTCGACGATGATACCAAACATCTGGGTGGCCTTCAAGTTCACCGGTGCGACGACGGGGTTGGCACTGGGGTTCATTTTCCCGGCCCTTATTGCATTGAGATTGGACAAGGAAGGCAAGTCTTTAGGTAAGGGTGAGAGGCTCCTGTCAATTGTGATGCTTGGTTTGGCCATGGTTGTTAGCATTATTGGAGTAATTGGAAATGTATACAGCCTGAGGAGCAAGTCTGCATGATCTATCATGATGAACAATTTAGTAGGGTTAGTGCATTGCCATGGCAGTCATACAGACTGTATTAGCATGGTCAGATACAGAAGACAGCAGAGGTACTACTTGAGCAAAGCTCAGATACATTTTGTTTACCTTTAGAGGTGCAGGAGCATTTCTTGAAGGTTTTTGTTTTTGGGAGCTTGGACTAGATTGACAGATTCTTTGATGTATTTGCATTTATTGGTAAGGCAGCACAAGATGATAAGAAGCTGGTTGTGTTGTACTGCGAGGTTGTTGCCTGTCTACTACATGAAAAGAAAAGAAACGA       ]
[+] EMBL CB643921             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTCGCCGTCGGCCTCGTCTCCATCCTGGTCATGGGGATCCTCTCCGAGGTCACCATTGAGCTGCTCGTGAGGTTCGCCGTGTACTGCCGCGCGCTGTCCTACGGCGAGGTGGTGCACAAGGCGCTCGGCCGTCCGGCGAGCATCGTGGCGCAGATGTGCGTCATCATCAACAATGCCGGCGTGCTCATCGTGTACCTCATCATCATCGGAGATGTGATGTCAGGGTCACTGAAGCACATTGGTGTCATGGATCAGTTGATCGGGCATGGCGAGTGGGATAACCGGAGGCTGCTGATCTTGGTGGTTCTTGTGATCTTTCTCTCCCCGTTGTGCGCGCTCGAGAAGATCGATTCGTTGAGCTTGTCGTCTGCTGCATCGGTCGCGCTTGCTGTCGTGTTTGTGGTTGTGTCATGCATCATTGCGCTGGTGAAGGTTGTTGAGGGTAAGATCAGTATGCCGAGGATGGGGCCGGATTTTAGCTCGAGGGCAGCAATGCTGGATTTGCTCGTCGTGATACCGATCATGACGAACGCCTACATCTGCCATTTCAATGTTCAGCCAATCTACAATGAGCTCAAGGAGAAGACACCTCACAACATGTACAAGATTGGGAGGATCACCACTGTGCTATGTGTTGTGGTATATGCACTGACTGCGGTCTCAGGGTACCTCTTGTTCGGCGAAGACACTGAATCTGATGTGCTCACCAACTTTGACAAGGATCTCGGGATCAGATTCAGCTCAATCCTCAACTTCATTGTCAAGATTGGGTATGTCATCCATCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB643922             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTCAGCTCAATCCTCAACTTCATTGTCAGGATTGGGTATGTCATCCATCTGGTTCTAGTCTTCCCGGTTGTCCACTTCTCGCTTAGGCAGTCGGTGGACTCGTTGATCTTTGGCGAGTTAGCGCCCCATAGCAGGAAAAAGATGCTCACCTTGACAGTGGTGCTCTTGGCACTCATCTATTTTGGCTCGACGATGATACCAAACATATGGGTGGCCTTCAAGTTCACCGGTGAGTCGACGGGGTTGGCACTGGGGTTCATTTTCCCGGCCCTTATTGCATTGAGATTGGACAAGGAAGGCAAGTCTTTAGGTAAGGGTGAGAGGCTCCTGTCAATTGTGATGCTTGGTTTGGCCATGGTTGTTAGCATTATTGGAGTAATTGGAAATGTATACAACCTGAGGAGCAAGTATGCATGATATCTCATGATGATCAATTTAGTAGGGTTAGTGCATTGCCATGGCAGTCATACAGAGTGTATTAGCACGGTCAGATACATAAGACAGCAGAGGTAGTTCTTGAGCAAAGCTCAGATCCATTTTGTTTACCTTTAGAGTTGCAGGAGCATTTCTTGAAGGTTTTTG                                                                                                                                                  ]
[-] EMBL CB622779             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAGCTCAATCCTCAACTTCATTGTCAGGATTGGGTATGTCATCCATCTGGTTCTCGTCTTCCCGGTTGTCCACTTCTCGCTTAGGCAGACGGTGGACTCGTTGATCTTTGGCGAGTTAGCGCCCCATAGCAGGAAAAAGATGCTCACCTTGACAGTGGTGCTCTTGGCACTCATCTATCTTGGCTCGACGATGATACCAAACATCTGGGTGGCCTTCAAGTTCACCGGTGCGACGACGGGGTTGGCACTGGGGTTCATTTTCCCGGCCCTTATTGCATTGAGATTGGACAAGGAAGGCAAGTCTTTAGGTAAGGGTGAGAGGCTCCTGTCAATTGTGATGCTTGGTTTGGCCATGGTTGTTAGCATTATTGGAGTAATTGGAAATGTATACAGCCTGAGGAGCAAGTCTGCATGATCTATCATGATGAACAATTTAGTAGGGTTAGTGCATTGCCATGGCAGTCATACAGACTGTATTAGCATGGTCAGATACAGAAGACAGCAGAGGTACTACTTGAGCAAAGCTCAGATACATTTTGTTTACCTTTAGAGGTGCAGGAGCATTTCTTGAAGGTTTTTGTTTTTGGGAGCTTGGACTAGATTGACAGATTCTTTGATGTATTTGCATTTATTGGTAAGGCAGCACAAGATGATAAGAAGCTGGTTGTGTTGTACTGCGAGGTTGTTGCCTGTCTACTAGAGGAAAAGAAAAGAAACGGATATGTT]


>consensus_8174#0 GAGAGAGAAGGAAGAACAGAGAGAGAGAGAGAGAGGAGGGAGAAGAAAAAAAATAATCGA AAATAAAATAAAATAAAGAGAGAGATAGAACCCCAGATCTCTCCACAGTTTCAACGCCTC AAATCTCTCAACTCTCGTCCCAATCCTTAGGTACACGCCTCCCTCTCTTTCCTCCAATTT TTGTTCGGAGGGAGGACGAATTTCAGTTCTTGTTTCTGTTTCGATCTCCAACCAAATCTG GCCCAAGAAAATTTGAGTTTCTTGTGTGGTAGATGCCACCAATGTGTGCCAAGCCCCTCT GAGATCTCACCGGCTGATCAGCTGATGTAGTTTGCAGTCGAATTTTGTTCCGTTTTTGGG GGCAAGATTGTGTTCTTGGAGCTGTAGATTGGTTATACATTTTTTTTTCCATTTCTTGGC TCAGTTTTGTCCATTCGACGAGGAATTTCTCGTCGTGTTTGTTGTTGATTGATTGATCCA ATCTTTGATGCGCCAAGAAGCAAGATGAACACGAATTACTCGTCCCTCCCATTGACCTCC ATCGAGCTCCAATCCAACCAGCGCACATCCGAGGTCGCCAATGGCGTCGGCTACAACGGC CACGCCAAGATCTCCAAGCAAGATTCGTTCCTGGTCGACGGCGAGAACGACGACCTGCCG CTCATCGGCGACGGCCCCGCCGGGCCACCCGAGGGCTCCGGCGTGCCCGCCGCGGTGTTC AACCTCGCCACCTCCATCATCGGCGCCGGCATTATGGCCCTCCCGGCCACCATGAAGGTT CTCGGCGTCGCCGTCGGCCTCGTCTCCATCCTGGTCATGGGGATCCTCTCCGAGGTCACC ATTGAGCTGCTCGTGAGGTTCGCCGTGTACTGCCGCGCGCTGTCCTACGGCGAGGTGGTG CACAAGGCGCTCGGCCGTCCGGCGAGCATCGTGGCGCAGATGTGCGTCATCATCAACAAT GCCGGCGTGCTCATCGTGTACCTCATCATCATCGGAGATGTGATGTCAGGGTCACTGAAG CACATTGGTGTCATGGATCAGTTGATCGGGCATGGCGAGTGGGATAACCGGAGGCTGCTG ATCTTGGTGGTTCTTGTGATCTTTCTCTTCCCGTTGTGCGCGCTCGAGAAGATCGATTCG TTGAGCTTGTCGTCTGCTGCATCGGTCGCGCTTGCTGTCGTGTTTGTGGTTGTGTCATGC ATCATTGCGCTGGTGAAGGTTGTTGAGGGTAAGATCAGTATGCCGAGGATGGGGCCGGAT TTTAGCTCGAGGGCAGCAATGCTGGATTTGCTCGTCGTGATACCGATCATGACGAACGCC TACATCTGCCATTTCAATGTTCAGCCAATCTACAATGAGCTCAAGGAGAAGACACCTCAC AACATGTACAAGATTGGGAGGATCACCACTGTGCTATGTGTTGTGGTATATGCACTGACT GCGGTCTCAGGGTACCTCTTGTTCGGCGAAGACACTGAATCTGATGTGCTCACCAACTTT GACAAGGATCTCGGGATCAGATTCAGCTCAATCCTCAACTTCATTGTCAGGATTGGGTAT GTCATCCATCTGGTTCTCGTCTTCCCGGTTGTCCACTTCTCGCTTAGGCAGACGGTGGAC TCGTTGATCTTTGGCGAGTTAGCGCCCCATAGCAGGAAAAAGATGCTCACCTTGACAGTG GTGCTCTTGGCACTCATCTATCTTGGCTCGACGATGATACCAAACATCTGGGTGGCCTTC AAGTTCACCGGTGCGACGACGGGGTTGGCACTGGGGTTCATTTTCCCGGCCCTTATTGCA TTGAGATTGGACAAGGAAGGCAAGTCTTTAGGTAAGGGTGAGAGGCTCCTGTCAATTGTG ATGCTTGGTTTGGCCATGGTTGTTAGCATTATTGGAGTAATTGGAAATGTATACAGCCTG AGGAGCAAGTCTGCATGATCTATCATGATGAACAATTTAGTAGGGTTAGTGCATTGCCAT GGCAGTCATACAGACTGTATTAGCATGGTCAGATACAGAAGACAGCAGAGGTACTACTTG AGCAAAGCTCAGATACATTTTGTTTACCTTTAGAGGTGCAGGAGCATTTCTTGAAGGTTT TTGTTTTTGGGAGCTTGGACTAGATTGACAGATTCTTTGATGTATTTGCATTTATTGGTA AGGCAGCACAAGATGATAAGAAGCTGGTTGTGTTGTACTGCGAGGTTGTTGCCTGTCTAC TACATGAAAAGAAAAGAAACGAATATGTT



consensusID : consensus_8174#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 809
fasta sequence
                              [AAAAAAAATAAAATAAAGAGAGAGATAGAACCCCAGATCTCTCCACAGTTTCAACGCCTCAAATCTCTCAACTCTCGTCCCAATCCTTAGGTACACGCCTCCCTCTCTTTCCTCCAATTTTTGTTCGGAGGGAGGACGAATTTCAGGTCTTGTTTCTGTTTCGATCTCCAACCAAATCTGGCCCAAGAAAATTTGAGTTTCTTGTGCGGTAGATGCCACCAATGTGTGCCAAGCCCCTCTGAGATCTCACCGGCTGATCAGCTGATGTAGTTTGCGGTCGAATTTTGTTCCGTTTTTTGGGGCAAGATTGTGTTCTTGGAGCTGTAGATTGGTTATACATTTTTTTTTCCATTTCTTGGCTCAGTTTTGTCCATTCGACGAGGAATTTCTCGTCGTGTTTCTTGTTGATTGATTGATCCAATCTTTGATGCGCCAAGAAGCAAGATGAACACGAATTACTCGTCCCTCCCATTGACCTCCATCGAGCTCCAATCCAACCAGCGCACATCCGAGGTCGCCAATGGCGTCGGCTACAACGGCCACGCCAAGATCTCCAAGCAAGATTCGTTCCTGGTCGACGGCGATGCCGCCGCCGGCGGCGGCGGCGGCGAGAACGACGACCTGCCGCTCATCGGCGACGGCCCCGCCGGGCCACCCGAGGGCTCCGGCGTGCCCGCCGCGGTGTTCAACCTCGCCACCTCCATCATCGGCGCCGGCATTATGGCCCTCCCGGCCACCATGAATGTTCTCGGCGTCGCCGTCGGCCTCGTCTCCATCCTGGTCATGGGGATCCTCTCCGAGGTCACCAT]

[+] EMBL CB622778             [AAAAAAAATAAAATAAAGAGAGAGATAGAACCCCAGATCTCTCCACAGTTTCAACGCCTCAAATCTCTCAACTCTCGTCCCAATCCTTAGGTACACGCCTCCCTCTCTTTCCTCCAATTTTTGTTCGGAGGGAGGACGAATTTCAGGTCTTGTTTCTGTTTCGATCTCCAACCAAATCTGGCCCAAGAAAATTTGAGTTTCTTGTGCGGTAGATGCCACCAATGTGTGCCAAGCCCCTCTGAGATCTCACCGGCTGATCAGCTGATGTAGTTTGCGGTCGAATTTTGTTCCGTTTTTTGGGGCAAGATTGTGTTCTTGGAGCTGTAGATTGGTTATACATTTTTTTTTCCATTTCTTGGCTCAGTTTTGTCCATTCGACGAGGAATTTCTCGTCGTGTTTCTTGTTGATTGATTGATCCAATCTTTGATGCGCCAAGAAGCAAGATGAACACGAATTACTCGTCCCTCCCATTGACCTCCATCGAGCTCCAATCCAACCAGCGCACATCCGAGGTCGCCAATGGCGTCGGCTACAACGGCCACGCCAAGATCTCCAAGCAAGATTCGTTCCTGGTCGACGGCGATGCCGCCGCCGGCGGCGGCGGCGGCGAGAACGACGACCTGCCGCTCATCGGCGACGGCCCCGCCGGGCCACCCGAGGGCTCCGGCGTGCCCGCCGCGGTGTTCAACCTCGCCACCTCCATCATCGGCGCCGGCATTATGGCCCTCCCGGCCACCATGAATGTTCTCGGCGTCGCCGTCGGCCTCGTCTCCATCCTGGTCATGGGGATCCTCTCCGAGGTCACCAT]


>consensus_8174#1 AAAAAAAATAAAATAAAGAGAGAGATAGAACCCCAGATCTCTCCACAGTTTCAACGCCTC AAATCTCTCAACTCTCGTCCCAATCCTTAGGTACACGCCTCCCTCTCTTTCCTCCAATTT TTGTTCGGAGGGAGGACGAATTTCAGGTCTTGTTTCTGTTTCGATCTCCAACCAAATCTG GCCCAAGAAAATTTGAGTTTCTTGTGCGGTAGATGCCACCAATGTGTGCCAAGCCCCTCT GAGATCTCACCGGCTGATCAGCTGATGTAGTTTGCGGTCGAATTTTGTTCCGTTTTTTGG GGCAAGATTGTGTTCTTGGAGCTGTAGATTGGTTATACATTTTTTTTTCCATTTCTTGGC TCAGTTTTGTCCATTCGACGAGGAATTTCTCGTCGTGTTTCTTGTTGATTGATTGATCCA ATCTTTGATGCGCCAAGAAGCAAGATGAACACGAATTACTCGTCCCTCCCATTGACCTCC ATCGAGCTCCAATCCAACCAGCGCACATCCGAGGTCGCCAATGGCGTCGGCTACAACGGC CACGCCAAGATCTCCAAGCAAGATTCGTTCCTGGTCGACGGCGATGCCGCCGCCGGCGGC GGCGGCGGCGAGAACGACGACCTGCCGCTCATCGGCGACGGCCCCGCCGGGCCACCCGAG GGCTCCGGCGTGCCCGCCGCGGTGTTCAACCTCGCCACCTCCATCATCGGCGCCGGCATT ATGGCCCTCCCGGCCACCATGAATGTTCTCGGCGTCGCCGTCGGCCTCGTCTCCATCCTG GTCATGGGGATCCTCTCCGAGGTCACCAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8174#0      GAGAGAGAAGGAAGAACAGAGAGAGAGAGAGAGAGGAGGGAGAAGAAAAAAAATAATCGA 60
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      AAATAAAATAAAATAAAGAGAGAGATAGAACCCCAGATCTCTCCACAGTTTCAACGCCTC 120
consensus_8174#1      AAAAAAAATAAAATAAAGAGAGAGATAGAACCCCAGATCTCTCCACAGTTTCAACGCCTC 60
                      *** ********************************************************

consensus_8174#0      AAATCTCTCAACTCTCGTCCCAATCCTTAGGTACACGCCTCCCTCTCTTTCCTCCAATTT 180
consensus_8174#1      AAATCTCTCAACTCTCGTCCCAATCCTTAGGTACACGCCTCCCTCTCTTTCCTCCAATTT 120
                      ************************************************************

consensus_8174#0      TTGTTCGGAGGGAGGACGAATTTCAGTTCTTGTTTCTGTTTCGATCTCCAACCAAATCTG 240
consensus_8174#1      TTGTTCGGAGGGAGGACGAATTTCAGGTCTTGTTTCTGTTTCGATCTCCAACCAAATCTG 180
                      ************************** *********************************

consensus_8174#0      GCCCAAGAAAATTTGAGTTTCTTGTGTGGTAGATGCCACCAATGTGTGCCAAGCCCCTCT 300
consensus_8174#1      GCCCAAGAAAATTTGAGTTTCTTGTGCGGTAGATGCCACCAATGTGTGCCAAGCCCCTCT 240
                      ************************** *********************************

consensus_8174#0      GAGATCTCACCGGCTGATCAGCTGATGTAGTTTGCAGTCGAATTTTGTTCCGTTTTTGGG 360
consensus_8174#1      GAGATCTCACCGGCTGATCAGCTGATGTAGTTTGCGGTCGAATTTTGTTCCGTTTTTTGG 300
                      *********************************** ********************* **

consensus_8174#0      GGCAAGATTGTGTTCTTGGAGCTGTAGATTGGTTATACATTTTTTTTTCCATTTCTTGGC 420
consensus_8174#1      GGCAAGATTGTGTTCTTGGAGCTGTAGATTGGTTATACATTTTTTTTTCCATTTCTTGGC 360
                      ************************************************************

consensus_8174#0      TCAGTTTTGTCCATTCGACGAGGAATTTCTCGTCGTGTTTGTTGTTGATTGATTGATCCA 480
consensus_8174#1      TCAGTTTTGTCCATTCGACGAGGAATTTCTCGTCGTGTTTCTTGTTGATTGATTGATCCA 420
                      **************************************** *******************

consensus_8174#0      ATCTTTGATGCGCCAAGAAGCAAGATGAACACGAATTACTCGTCCCTCCCATTGACCTCC 540
consensus_8174#1      ATCTTTGATGCGCCAAGAAGCAAGATGAACACGAATTACTCGTCCCTCCCATTGACCTCC 480
                      ************************************************************

consensus_8174#0      ATCGAGCTCCAATCCAACCAGCGCACATCCGAGGTCGCCAATGGCGTCGGCTACAACGGC 600
consensus_8174#1      ATCGAGCTCCAATCCAACCAGCGCACATCCGAGGTCGCCAATGGCGTCGGCTACAACGGC 540
                      ************************************************************

consensus_8174#0      CACGCCAAGATCTCCAAGCAAGATTCGTTCCTGGTCGACGGCGA---------------- 644
consensus_8174#1      CACGCCAAGATCTCCAAGCAAGATTCGTTCCTGGTCGACGGCGATGCCGCCGCCGGCGGC 600
                      ********************************************                

consensus_8174#0      -----------GAACGACGACCTGCCGCTCATCGGCGACGGCCCCGCCGGGCCACCCGAG 693
consensus_8174#1      GGCGGCGGCGAGAACGACGACCTGCCGCTCATCGGCGACGGCCCCGCCGGGCCACCCGAG 660
                                 *************************************************

consensus_8174#0      GGCTCCGGCGTGCCCGCCGCGGTGTTCAACCTCGCCACCTCCATCATCGGCGCCGGCATT 753
consensus_8174#1      GGCTCCGGCGTGCCCGCCGCGGTGTTCAACCTCGCCACCTCCATCATCGGCGCCGGCATT 720
                      ************************************************************

consensus_8174#0      ATGGCCCTCCCGGCCACCATGAAGGTTCTCGGCGTCGCCGTCGGCCTCGTCTCCATCCTG 813
consensus_8174#1      ATGGCCCTCCCGGCCACCATGAATGTTCTCGGCGTCGCCGTCGGCCTCGTCTCCATCCTG 780
                      *********************** ************************************

consensus_8174#0      GTCATGGGGATCCTCTCCGAGGTCACCATTGAGCTGCTCGTGAGGTTCGCCGTGTACTGC 873
consensus_8174#1      GTCATGGGGATCCTCTCCGAGGTCACCAT------------------------------- 809
                      *****************************                               

consensus_8174#0      CGCGCGCTGTCCTACGGCGAGGTGGTGCACAAGGCGCTCGGCCGTCCGGCGAGCATCGTG 933
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      GCGCAGATGTGCGTCATCATCAACAATGCCGGCGTGCTCATCGTGTACCTCATCATCATC 993
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      GGAGATGTGATGTCAGGGTCACTGAAGCACATTGGTGTCATGGATCAGTTGATCGGGCAT 1053
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      GGCGAGTGGGATAACCGGAGGCTGCTGATCTTGGTGGTTCTTGTGATCTTTCTCTTCCCG 1113
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      TTGTGCGCGCTCGAGAAGATCGATTCGTTGAGCTTGTCGTCTGCTGCATCGGTCGCGCTT 1173
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      GCTGTCGTGTTTGTGGTTGTGTCATGCATCATTGCGCTGGTGAAGGTTGTTGAGGGTAAG 1233
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      ATCAGTATGCCGAGGATGGGGCCGGATTTTAGCTCGAGGGCAGCAATGCTGGATTTGCTC 1293
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      GTCGTGATACCGATCATGACGAACGCCTACATCTGCCATTTCAATGTTCAGCCAATCTAC 1353
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      AATGAGCTCAAGGAGAAGACACCTCACAACATGTACAAGATTGGGAGGATCACCACTGTG 1413
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      CTATGTGTTGTGGTATATGCACTGACTGCGGTCTCAGGGTACCTCTTGTTCGGCGAAGAC 1473
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      ACTGAATCTGATGTGCTCACCAACTTTGACAAGGATCTCGGGATCAGATTCAGCTCAATC 1533
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      CTCAACTTCATTGTCAGGATTGGGTATGTCATCCATCTGGTTCTCGTCTTCCCGGTTGTC 1593
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      CACTTCTCGCTTAGGCAGACGGTGGACTCGTTGATCTTTGGCGAGTTAGCGCCCCATAGC 1653
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      AGGAAAAAGATGCTCACCTTGACAGTGGTGCTCTTGGCACTCATCTATCTTGGCTCGACG 1713
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      ATGATACCAAACATCTGGGTGGCCTTCAAGTTCACCGGTGCGACGACGGGGTTGGCACTG 1773
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      GGGTTCATTTTCCCGGCCCTTATTGCATTGAGATTGGACAAGGAAGGCAAGTCTTTAGGT 1833
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      AAGGGTGAGAGGCTCCTGTCAATTGTGATGCTTGGTTTGGCCATGGTTGTTAGCATTATT 1893
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      GGAGTAATTGGAAATGTATACAGCCTGAGGAGCAAGTCTGCATGATCTATCATGATGAAC 1953
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      AATTTAGTAGGGTTAGTGCATTGCCATGGCAGTCATACAGACTGTATTAGCATGGTCAGA 2013
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      TACAGAAGACAGCAGAGGTACTACTTGAGCAAAGCTCAGATACATTTTGTTTACCTTTAG 2073
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      AGGTGCAGGAGCATTTCTTGAAGGTTTTTGTTTTTGGGAGCTTGGACTAGATTGACAGAT 2133
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      TCTTTGATGTATTTGCATTTATTGGTAAGGCAGCACAAGATGATAAGAAGCTGGTTGTGT 2193
consensus_8174#1      ------------------------------------------------------------
                                                                                  

consensus_8174#0      TGTACTGCGAGGTTGTTGCCTGTCTACTACATGAAAAGAAAAGAAACGAATATGTT 2249
consensus_8174#1      --------------------------------------------------------
                                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)