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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8193#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 803 fasta sequence
[TTGAAAATCGCTTTGCCTCTTCTCAAAATGAATAGTATCCGACTTCAGAGTGGATATGATACATGGTTTCTAGCATTCTCTTCAATACACAGCTCAGCTAATGATGCTGCGAATGTGCAAATAAACACCTCAACTAGCATCCCTCTCTTATCTCTAAACTGACTGAAAAAGAATCACTTGGGTAATGTAATAAATTGTGCCTGTCTATTTGTCAAAAATGTACACTATACAATGTAAATAGGAAATTTAAGACAGTTTGGAGATCTTGTGTTGCCTGGCATCATCCTGCCATATAAATACTAGATTCTTGTGAAGCAGCAAATTATCACGACCTGTGGATCTCACCCATATATGTGAAAATAGGAATTGGTGTATTTGTATCTGACTCTGGGGGATAAATATATGTTGATATATGTCATCTAGCAAGAGGTTCAAGCTGGACCTCCATCACACCAGAAGGACTTGATTCTGAATTCCTGTCTGTACTGTCAGGATGCAAAAGATCAACTGAATCGTCTTCCTCGGTGTTACCTAACACCCAGTGCCCTCTAGAGCTTGTGTCGCCGCTCCTCCGTTTGACCTCTTTATACTCCAAGTAAAGTGTTATAACTATAGCAGAAAGCACCCACAGCATCAAGGCCCAAGTGAGCTCCTCTACATTCTCGCTATCATACCTATGGCCTAAATGCTTCATTCCAGTGAAAAGTGCCACAATTCCGACTATGATTGCCGACCTGCCTGTGATAACATGAAGGTATTCCCAGAGGACACGATTCCAGGATGAAGCCTCCCCATTAGCTGGT]
[+] EMBL CB664403 [ TGAAAATCGCTTTGCCTCTTCTCAAAATGAATAGTATCCGACTTCAGAGTGGATATGATACATGGTTTCTAGCATTCTCTTCAATACACAGCTCAGCTAATGATGCTGCGAATGTGCAAATAAACACCTCAACTAGCATCCCTCTCTTATCTCTAAACTGACTGAAAAAGAATCACTTGGGTAATGTAATAAATTGTGCCTGTCTATTTGTCAAAAATGTACACTATACAATGTAAATAGGAAATTTAAGACAGTTTGGAGATCTTGTGTTGCCTGGCATCATCCTGCCATATAAATACTAGATTCTTGTGAAGCAGCAAATTATCACGACCTGTGGATCTCACCCATATATGTGAAAATAGGAATTGGTGTATTTGTATCTGACTCTGGGGGATAAATATATGTTGATATATGTCATCTAGCAAGAGGTTCAAGCTGGACCTCCATCACACCAGAAGGACTTGATTCTGAATTCCTGTCTGTACTGTCAGGATGCAAAAGATCAACTGAATCGTCTTCCTCGGTGTTACCTAACACCCAGTGCCCTCTAGAGCTTGTGTCGCCGCTCCTCCGTTTGACCTCTTTATACTCCAAGTAAAGTGTTATAACTATAGCAGAAAGCACCCACAGCATCAAGGCCCAAGTGAGCTCCTCTACATTCTCGCTATCATACCTATGGCCTAAATGCTTCATTCCAGTGAAAAGTGCCACAATTCCGACTATGATTGCCGACCTGCCTGTGATAACATGAAGGTATTCCCAGAGGACACGATTCCAGGATGAAGCCTCCCCATTAGCTGGT]
[-] EMBL CA765447 [tgtAAAATCGCTTTGCCTCTTCTCAAAATGAATAGTATCCGACTTCAGAGTGGATATGATACATGGTTTCTAGCATTCTCTTCAATACACAGCTCAGCTAATGATGCTGCGAATGTGCAAATAAACACCTCAACTAGCATCCCTCTCTTATCTCTAAACTGACTGAAAAAGAATCACTTGGGTAATGTAATAAATTGTGCCTGTCTATTTGTCAAAAATGTACACTATACAATGTAAATAGGAAATTTAAGACAGTTTGGAGATCTTGTGTTGCCTGGCATCATCCTGCCATATAAATACTAGATTCTTGTGAAGCAGCAAATTATCACGACCTGTGGATCTCACCCATATATGTGAAAATAGGAATTGGTGTATTTGTATCTGACTCTGGGGGATAAATATATGTTGATATATGTCATCTAGCAAGAGGTTCAAGCTGGACCTCCATCACACCAGAAGGACTTGATTCTGAATTCCTGTCTGTACTGTCAGGATGCAAAAGATCAACTGAATCGTC TCCTCGGTGTTACCTAACA ]
[+] EMBL CB637685 [ tcttTTTGCCTCTTCTCAAAATG ATAGTATCCGACTTCAGAGTGGATATGATACATGGTTTCTAGCATTCTCTTCAATACACAGCTCAGCTAATGATGCTGCGAATGTGCAAATAAACACCTCAACTAGCATCCCTCTCTTATCTCTAAACTGACTGAAAAAGAATCACTTGGGTAATGTAATAAATTGTGCCTGTCTATTTGTCAAAAATGTACACTATACAATGTAAATAGGAAATTTAAGACAGTTTGGAGATCTTGTGTTGCCTGGCATCATCCTGCCATATAAATACTAAATTCTTGTGAAGCAGCAAATTATCACGACCTGTGGATCTCACCCATATATGTGAAAATAGGAATTGGTGTATTTGTATCTGACTCTGGGGGATAAATATATGTTGATATATGTCATCTAGCAAGAGGTTCAAGCTGGACCTCCATCACACCAGAAGGACTTGATTCTGAATTCCTGTCTGTACTGTCAGGATGCAAAAGATCAACTGAATCGTCTTCCTCGGTGTTACCTAACACCCAGTGCCCTCTAGAGCTTGTGTCGCCGC ]
[-] EMBL AK058533 [ TTTGCCTCTTCTCAAAATGAATAGTATCCGACTTCAGAGTGGATATGATACATGGTTTCTAGCATTCTCTTCAATACACAGCTCAGCTAATGATGCTGCGAATGTGCAAATAAACACCTCAACTAGCATCCCTCTCTTATCTCTAAACTGACTGAAAAAGAATCACTTGGGTAATGTAATAAATTGTGCCTGTCTATTTGTCAAAAATGTACACTATACAATGTAAATAGGAAATTTAAGACAGTTTGGAGATCTTGTGTTGCCTGGCATCATCCTGCCATAT ]
[-] EMBL CA767612 [ AATGAATAGTATCCGACTTCAGAGTGGATATGATACATGGTTTCTAGCATTCTCTTCAATACACAGCTCAGCTAATGATGCTGCGAATGTGCAAATAANCACCTCAACTAGCATCCCTCTCTTATCTCTAAACTGACTGAAAAAGAATCACTTGGGTAATGTAATAAATTGTGCCTGTCTATTTGTCAAAAATGTACACTATACAATGTAAATAGGAAATTTAAGACAGTTTGGAGATCTTGTGTTGCCTGGCATCATCCTGCCATATAAATACTAGATTCTTGTGAAGCAGCAAATTATCACGACCTGTGGATCTCACCCATATATGTGAAAATAGGAATTGGTGTATTTGTATCTGACTCTGGGGGATAAATATATGTTGATATATGTCATCTAGCAAGAGGTTCAAGCTGGACCTCCATCACACCAGAAGGACTTGATTCTGAATTCCTGTCTGTACTGTCAGGATGCAAAAGATCAACTGAATCGTCTTCCTCGGTGTTACCTAACACCCAGTGCCCTCTAGAGCTTGTGTCGCCGCTCCTCCGTTTGACCTCTTTATACTCCAAGTAAAGTGTTATAACTATAGCAGAAAGCACCCACAGCATCAAGGCCCAAGTGAGCTCCTCTACATTCTCGCTATCATACCTATGGCCTAAATGCTTCATTCCAGTGAAAAGTGCC ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||