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Oryza sativa
cluster # 8199 cluster # 8199       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8199#0 length = 900 sequences # 5  

consensusID : consensus_8199#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 900
fasta sequence
                              [AGGTCTTGACGGCATTCATCGCCGAAATCCCCAAATGGACACGGCGAGCTTGTGCACCGTGGAGAAGCGCGGCGCCGTCCACGTCATCACCCTCACCGGCGCCGGCGAGCACCGCCTCGGCCCGCCCCTCCTGTCCGCGCTCCGCTCCGCCGTCGCCGCCGTCCGCGCCGCCGCCGCCGCGGGCGCCGGCGGCGCGCTGGTGATTGCCGGCGAGGGCAAGTACTTCTCCAACGGGTTCGACCTGGACTGGGCGCGCACCGTGCCCGCCGAGCTGCACGCCTCCATGGGCGGCGCCTTCCGGGGCCTCGTCGCCGACCTCCTCGCTCTCCCGGTGCCCACCGTCGCCGCCGTCACCGGCCACGCCGCGGCCGCCGGGTGCGCGCTGGCGCTCGCGCACGACGCCGTGGTCATGCGCGCCTCCCGCGGCTTCCTGTACATGAGCGAGGTGGACGCCGGCCTCAAGATCGTCGACTTCTTCGCCGAGCTGATCCGGCAGAAGGTCCCCGACGCCGTGAACAGGAGGGATCTAGTCCTCCGGGGCGACAAGATGACGGCGGCCGACGCCCTGCGGCGGGGC-ATCGTGGACGC-GGCCGTCGACGGCGG-CGTCGACGACGTGGTGGCCGCCGCCGTCCGGGAGGCGG-AGGCGCTCGCGGCGAGGGGATGGGACGGGGAGATCGTGGCCGAGACCAGGAAGGCGATTTGGCCGGAGCTCTGGGCCAAGGTGAAGGACCACGCCACCGACGAGCCTCCGCCGCCGCCGCCACGGCCGCTGCTGTAGTCTACCTTACCGTATGTTGTATCGTGTATGCTTCCGCTGCATCAAGATTGGTGCGCTGCAAATGTATCCTCGCAGGATTGCATGATTTGTATCACATGATTTTGCTGAAAAAAAAAAAAAAA]

[+] EMBL AK067719             [AGGTCTTGACGGCATTCATCGCCGAAATCCCCAAATGGACACGGCGAGCTTGTGCACCGTGGAGAAGCGCGGCGCCGTCCACGTCATCACCCTCACCGGCGCCGGCGAGCACCGCCTCGGCCCGCCCCTCCTGTCCGCGCTCCGCTCCGCCGTCGCCGCCGTCCGCGCCGCCGCCGCCGCGGGCGCCGGCGGCGCGCTGGTGATTGCCGGCGAGGGCAAGTACTTCTCCAACGGGTTCGACCTGGACTGGGCGCGCACCGTGCCCGCCGAGCTGCACGCCTCCATGGGCGGCGCCTTCCGGGGCCTCGTCGCCGACCTCCTCGCTCTCCCGGTGCCCACCGTCGCCGCCGTCACCGGCCACGCCGCGGCCGCCGGGTGCGCGCTGGCGCTCGCGCACGACGCCGTGGTCATGCGCGCCTCCCGCGGCTTCCTGTACATGAGCGAGGTGGACGCCGGCCTCAAGATCGTCGACTTCTTCGCCGAGCTGATCCGGCAGAAGGTCCCCGACGCCGTGAACAGGAGGGATCTAGTCCTCCGGGGCGACAAGATGACGGCGGCCGACGCCCTGCGGCGGGGC ATCGTGGACGC GGCCGTCGACGGCGG CGTCGACGACGTGGTGGCCGCCGCCGTCCGGGAGGCGG AGGCGCTCGCGGCGAGGGGATGGGACGGGGAGATCGTGGCCGAGACCAGGAAGGCGATTTGGCCGGAGCTCTGGGCCAAGGTGAAGGACCACGCCACCGACGAGCCTCCGCCGCCGCCGCCACGGCCGCTGCTGTAGTCTACCTTACCGTATGTTGTATCGTGTATGCTTCCGCTGCATCAAGATTGGTGCGCTGCAAATGTATCCTCGCAGGATTGCAT                                       ]
[+] EMBL CA756339             [                     CCGAAATCCCCAAATGGACACGGCGAGCTTGTGCACCGTGGAGAAGCGCGGCGCCGTCCACGTCATCACCCTCACCGGCGCCGGCGAGCACCGCCTCGGCCCGCCCCTCCTGTCCGCGCTCCGCTCCGCCGTCGCCGCCGTCCGCGCCGCCGCCGCCGCGGGCGCCGGCGGCGCGCTGGTGATTGCCGGCGAGGGCAAGTACTTCTCCAACGGGTTCGACCTGGACTGGGCGCGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL AU083471             [                                                                                                                                                                                                                                                                                                                                                                                              CTGGCGCTCGCGCACGACGCCGTGGTCATGCGCGCCTCCCGCGGCTTCCTGTACATGAGCGAGGTGGACGCCGGCCTCAAGATCGTCGACTTCTTCGCCGAGCTGATCCGGCAGAAGGTCCCCGACGCCGTGAACAGGAGGGATCTAGTCCTCCGGGGCGACAAGATGACGGCGGCCGACGCCCTGCGGCGGGGC ATCGTGGACGC GGCCGTCGACGGCGG CGTCGACGACGTGGTGGCCGCCGCCGTCCGGGAGGCGG AGGCGCTCGCGGCGAGGGGATGGGACGGGGAGATCGTGGCCGAGACCAGGAAGGCGATTTGGCCGGAGCTCTGGGCCAAGGTGAAGGACCACGCCACCGACGAGCCTCCGCCGCCGCCGCCACGGCCGCTGCTGTAGTCTACCTTACCGTATGTTGTATCGTGTATGCTTCCGCTGCATCAAGATTGGTGCGCTGCAAATGTATCCTCGCAGGATTGCATGATTTGTATCACATG                        ]
[-] EMBL OSC2831              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               aACG CCTTCGGCGGGGCAATCGTGAACGCGGGCCCTCGACGGCGGCCGTCGACGACGTGGT GCCGCCGCCGTCCGGAAGGCGGAAGGCGCTCGCGGCGAGGGGATGGGACGGGNAGATCGTGGCCGAGACCAGGAAGGCGATTTGGCCGGAGCTCTGGGCCAAGGTGAAGGACCACGCCACCGACGAGCCTCCGCCGCCGCCGCCACGGCCGCTGCTGTAGTCTACCTTACCGTATGTTGTATCGTGTAT CTTCCGCTGCATCAAGATTGGTGCGCTGCAAATGTATCCTCGCAGGATTGCATGATTTGTATCACATG                        ]
[-] EMBL CA763202             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       agaGGACGAGACAAGGGGGGCGATTTGGCCGGAGCTCTGGGCCAAGGTGAAGGACCACGCCACCGACGAGCCTCCGCCGCCGCCGCCACGGCCGCGGCTGTAGTCTACCTTACCGTATGTTGTATCGTGTATGCTTCCCCTGCATCAAGATTGGTGCGCTGCAAATGTATCCTCGCAGGATTGCATGATTTGTATCACATGATTTTGCTGAAAAAAAAAAAAAAA]


>consensus_8199#0 AGGTCTTGACGGCATTCATCGCCGAAATCCCCAAATGGACACGGCGAGCTTGTGCACCGT GGAGAAGCGCGGCGCCGTCCACGTCATCACCCTCACCGGCGCCGGCGAGCACCGCCTCGG CCCGCCCCTCCTGTCCGCGCTCCGCTCCGCCGTCGCCGCCGTCCGCGCCGCCGCCGCCGC GGGCGCCGGCGGCGCGCTGGTGATTGCCGGCGAGGGCAAGTACTTCTCCAACGGGTTCGA CCTGGACTGGGCGCGCACCGTGCCCGCCGAGCTGCACGCCTCCATGGGCGGCGCCTTCCG GGGCCTCGTCGCCGACCTCCTCGCTCTCCCGGTGCCCACCGTCGCCGCCGTCACCGGCCA CGCCGCGGCCGCCGGGTGCGCGCTGGCGCTCGCGCACGACGCCGTGGTCATGCGCGCCTC CCGCGGCTTCCTGTACATGAGCGAGGTGGACGCCGGCCTCAAGATCGTCGACTTCTTCGC CGAGCTGATCCGGCAGAAGGTCCCCGACGCCGTGAACAGGAGGGATCTAGTCCTCCGGGG CGACAAGATGACGGCGGCCGACGCCCTGCGGCGGGGCATCGTGGACGCGGCCGTCGACGG CGGCGTCGACGACGTGGTGGCCGCCGCCGTCCGGGAGGCGGAGGCGCTCGCGGCGAGGGG ATGGGACGGGGAGATCGTGGCCGAGACCAGGAAGGCGATTTGGCCGGAGCTCTGGGCCAA GGTGAAGGACCACGCCACCGACGAGCCTCCGCCGCCGCCGCCACGGCCGCTGCTGTAGTC TACCTTACCGTATGTTGTATCGTGTATGCTTCCGCTGCATCAAGATTGGTGCGCTGCAAA TGTATCCTCGCAGGATTGCATGATTTGTATCACATGATTTTGCTGAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)