These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8208#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1188 fasta sequence [CTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCTTTAGTGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGAGCAGTACCGCAACGTTAGAGAAAGCAAAGCAAGCAGCCCCGGGTGATCAACAACCTCAAAGATGGAGCCGGTGGGCAGCATCGTGGGCGCGGTGCCGAA-GTGGCTTCGGCGATCGCCAAGGCAGTGAAGACGGCTCGCCGGAACAAGACCAGGTGCCGGGAGCTAGCCCAGCGCGTGAAGGAAGTCGACGACATCCTGAGGGAGTACAAGAAGGTGGCCATGGGAGACGCGGCGGCGACGACGCGG-AAGATTCTGGGCCGTCTCAAGGACGCCCTCGACGACGCGCTCAAGCTCGTCGAGTCCTGCGGCAGGAGCAGGGACGGTCTGCTCTTCAGGCTCCACAGGTTCGTGGCCAGCGACGGGCTCGCCGCCAAGCTCGATGACGTCAACAGTAGGATCAACAACTGCCTCATCGCCCTCCAGGCCG-TCAACGTTGCCCACCTACAGAAGAAGATGGACCGCCACCTCGCCGTCGCCGCTGGTGGGGGCGATCACCGCCGCACAAACAATCCAAGGGAGATCAACGCCGGCAAGAGCGGCAACAAAGGTAACAAGGGCGGGCAGCAGCACAAGCAGAACGGAGGGAAGGGCGGCAAACGGAGGAAAGGCAAGAAGGCGGCCGGGCCACCGCCGCAGCCGCAGCCATGCACCCCCACCGGCGCCGTCTTCCCTTACTACCTTGTCCACTCCATGGAGGAGGATCCCACCTCCTGCTCCGTGATGTGATCCACGCGCGCGTGCACGGAGGAAGCCATGCAAGCATCTAAGCTCCGGCAGCTGCGCAGGCGCAGCTCGTGCTTGATCCATCACCACCAGTGA] [+] EMBL AK110901 [CTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCTTTAGTGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGAGCAGTACCGCAACGTTAGAGAAAGCAAAGCAAGCAGCCCCGGGTGATCAACAACCTCAAAGATGGAGCCGGTGGGCAGCATCGTGGGCGCGGTGCCGAAGGTGGCTTCGGCGATCGCCAAGGCAGTGAAGACGGCTCGCCGGAACAAGACCAGGTGCCGGGAGCTAGCCCAGCGCGTGAAGGAAGTCGACGACATCCTGAGGGAGTACAAGAAGGTGGCCATGGGAGACGCGGCGGCGACGACGCGG AAGATTCTGGGCCGTCTCAAGGACGCCCTCGACGACGCGCTCAAGCTCGTCGAGTCCTGCGGCAGGAGCAGGGACGGTCTGCTCTTCAGGCTCCACAGGTTCGTGGCCAGCGACGGGCTCGCCGCCAAGCTCGATGACGTCAACAGTAGGATCAACAACTGCCTCATCGCCCTCCAGGCCG TCAACGTTGCCCACCTACAGAAGAAGATGGACCGCCACCTCGCCGTCGCCGCTGGTGGGGGCGATCACCGCCGCACAAACAATCCAAGGGAGATCAACGCCGGCAAGAGCGGCAACAAAGGTAACAAGGGCGGGCAGCAGCACAAGCAGAACGGAGGGAAGGGCGGCAAACGGAGGAAAGGCAAGAAGGCGGCCGGGCCACCGCCGCAGCCGCAGCCATGCACCCCCACCGGCGCCGTCTTCCCTTACTACCTTGTCCACTCCATGGAGGAGGATCCCACCTCCTGCTCCGTGATGTGATCCACGCGCGCGTGCACGGAGGAAGCCATGCAAGCATCTAAGCTCCGGCAGCTGCGCAGGCGCAGCTCGTGCTTGATCCATCACCACCAGTGA] [+] EMBL OSC102881 [ AAAGCAAGCAGCCCCGGGTGATCAACAACCTCAAAGATGGAGCCGGTGGGCAGCATCNTGGGCGCGGTGCCGAA GTGGCTTCGGCGATCGCCAAGGCAGTTAAGACGGCTCGNCGGAACAAGACCAGGTGCCGGGAGCTAGCCCAGCGCGTNAAGGAAGTCGACGACATCCTNAGGGAGTACAAGAAGGTGGCC ] [+] EMBL CA753990 [ AGCAAGCAGCCCCGGGTGATCAACAACCTCAAAGATGGAGCCGGTGGGCAGCATCGTGGGCGCGGTGCCGAAGGTGGCTTCGGCGATCGCCAAGGCAGTGAAGACGGCTCGCCGGAACAAGACCAGGTGCCGGGAGCTAGCCCAGCGCGTGAAGGAAGTCGACGACATCCTGAGGGAGTACAAGAAGGTGGCCATGGGAGACGCGGCGGCGACGACGCGG AAGATTCTGGGCCGTCTCAAGGACGCCCTCGACGACGCGCTCAAGCTCGTCGAGTCCTGCGGCAGGAGCAGGGACGGTCTGCTCTTCAGGCTCCACAGGTTCGTGGCCAGCGACGGGCTCGCCGCCAAGCTCGATGACGTCAACAGTAGGATCAACAACTGCCTCATCGCCCTCCAGGCCG TCAACGTTGCCCACCTACAGAAGAAGATGGACCGCCACCTCGCCGTCGCCGCTGGTGGGGGCGATCACCGCCGCACAAACAATCCAAGGGAGATCAACGCCGGCAAGAGCGGCAACAAAGGTAACAAGGGCGGGCAGCAGCACAAGCAGAACGGAGGGAAGGGCGGCAAACGGAGGAAAGGCAAGAAGGC ] [+] EMBL C96743 [ GCAAGCAGCCCCGGGTGATCAACAACCTCAAAGATGGAGCCGGTGGGCAGCATCGTGGGCGCGGTGCCGAA GTGGCTTCGGCGATCGCCAAGGCAGTGAAGACGGCTCGCCGGAACAAGACCAGGTGCCGGGAGCTAGCCCAGCGCGTGAAGGAAGTCGACGACATCCTGAGGGAGTACAAGAAGGTGGCCATGGGAGACGCGGCGGCGACGACGCGGAAAGATTCTGGGCCGTCTCAAGGACGCCCTCGACGACGCGCTCAAGCTCGTCGAGTCCTGCGGCAGGAGCAGGGACGGTCTGCTCTTCAGGCTCCACAGGTTCGTGGCCAGCGACGGGCTCGCCGCCAAGCTCGATGACGTCAACAGTAGGATCAACAACTGCCTCATCGCCCTCCAGGCCGTTCAACGTTGCCCACCTACAGAAGAAGATGGACCGCCACC ] [+] EMBL C28871 [ CCCCGGGTGATCAACAACCTCAAAGATGGAGCCGGTGGGCAGCATCGTGGGCGCGGTGCCGAA GTGGCTTCGGCGATCGCCAAGGCAGTTAAGACGGCTCGCCGGAACAAGACCAGGTGCCGGGAGCTAGCCCAGCGCGTNAAGGAAGTCGACGACATCCTGAGGGAGTACAAGAAGGTGGCCATGGGAGACGCGGCGGCGACGACG GA AAGATTCTGGGCCGTCTCAAGGACGCCCTCGACGACGCGNTCAAGNTCGTCGAGTCCTTCGGCAGGAn ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||