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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8210#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1344 fasta sequence
[TTCATCGAACACCTTGCGATCACCCTCTCACCACCGCTAGAGATCACCATTGTGAGGCTCCCCGGCCGGAGCAGGAGGTTAGAGGGAGTGGAGGAAGAGCCGTGCTGCCGCCGTCGCCATGGGGGAAGCCGGGTAGCCGCTGGACATCAAGAAACGCCGTCGAGCACCTTACGTCGCTGCCGTTTGCCCCTGTCCTGCACCGCGTCGAGCTCCACTTCGCTGCGTTTCGCCATCTCGCCATCTCGCGAAATTGTGTATCGATTAGTGGTGAGGCAACGTATGCAGCTTCCAGGAGGTGAAGGTTGATCAAGATTATACCAAGAATAAGAACTATCCTGAGCAGGACGTGACACCGAACCCCCTGGTTTGGCTGAACCATGGGCTGGCCCAAACCAGCCCATCTTCGGTTGGCGACTTCCTCTATTGCTTCACTTTGTAGACTTGTGAATTTTGGCCCAATTCATCGTGTCAATTCTGAGTTCTTGGCCCATTCATACATAAGTCTGGTTCTCGACATCGTCCGATTGATTTATCGTCTATGTTGATGTCGATTCTCCTCCACTTTAGTGTCATTCTCTACAAAAAGATATATTGATGTCGAGGATGTCCAGCAGCACGGGCAGCCCGATATGCCGGTGATCGTTCCGGCGCTCACACTCGAGCCGTTCGTGCTGTGGGAGGAAATTAGTCAGGGCCCGTCCGCGGAGGCAAACATGGCGATGACGTTGCTAGATTTCAAGAACATGTTGGCTGACCGAGCTCGTCGAATCCGATATTGGAAGACGAAACTCGAGGTGGTGGAACTC-AAAAAAATCATGGTGCAGGTGAAGAAGGACCAGGCCATGGAAGCTCTCCGGGGGTCACGAGGTGTGGTTCAACTCGTACCTCAGGAGCTGTTGCACGTCGATGGCGAGGGTTTGCATGGAGCTCTGAGTTCCCCGCGAAGATCCCGAGGAGTCGGCGGCTGGTTATATCTCGTGGTTGAATGAGGCTTGCGCACAGCTCGAAGGGATTGGCCAGCGCATCGACGATGCCCTGAAGCAGGAGTGTCGTCGAGCGAGCCGCTATGCCAGAGGACATGTGCTAGCCTGCATCCGAGATCATCGTTCGCAGCTGCATCTCGAGTTCCTTCGCGAAGGGTTCTCGCGTTCTCGGAGGACACCTGCGGAGATCGACGGTCCTGCGGAGATCCGCTCCATGGATTGGCGTTGGCCGTCTGGTAGTTTTTGTATTATGTAGAAAAATATCTCAAGGAAGCATGTAATATACTTTGAAGTATTTATGACTTGTAAGAAATACTTGTAAAATAGAAAAGGAATCTATCTAAGTTTTCTTACTCTGGGC]
[+] EMBL AK065603 [TTCATCGAACACCTTGCGATCACCCTCTCACCACCGCTAGAGATCACCATTGTGAGGCTCCCCGGCCGGAGCAGGAGGTTAGAGGGAGTGGAGGAAGAGCCGTGCTGCCGCCGTCGCCATGGGGGAAGCCGGGTAGCCGCTGGACATCAAGAAACGCCGTCGAGCACCTTACGTCGCTGCCGTTTGCCCCTGTCCTGCACCGCGTCGAGCTCCACTTCGCTGCGTTTCGCCATCTCGCCATCTCGCGAAATTGTGTATCGATTAGTGGTGAGGCAACGTATGCAGCTTCCAGGAGGTGAAGGTTGATCAAGATTATACCAAGAATAAGAACTATCCTGAGCAGGACGTGACACCGAACCCCCTGGTTTGGCTGAACCATGGGCTGGCCCAAACCAGCCCATCTTCGGTTGGCGACTTCCTCTATTGCTTCACTTTGTAGACTTGTGAATTTTGGCCCAATTCATCGTGTCAATTCTGAGTTCTTGGCCCATTCATACATAAGTCTGGTTCTCGACATCGTCCGATTGATTTATCGTCTATGTTGATGTCGATTCTCCTCCACTTTAGTGTCATTCTCTACAAAAAGATATATTGATGTCGAGGATGTCCAGCAGCACGGGCAGCCCGATATGCCGGTGATCGTTCCGGCGCTCACACTCGAGCCGTTCGTGCTGTGGGAGGAAATTAGTCAGGGCCCGTCCGCGGAGGCAAACATGGCGATGACGTTGCTAGATTTCAAGAACATGTTGGCTGACCGAGCTCGTCGAATCCGATATTGGAAGACGAAACTCGAGGTGGTGGAACTC AAAAAAATCATGGTGCAGGTGAAGAAGGACCAGGCCATGGAAGCTCTCCGGGGGTCACGAGGTGTGGTTCAACTCGTACCTCAGGAGCTGTTGCACGTCGATGGCGAGGGTTTGCATGGAGCTCTGAGTTCCCCGCGAAGATCCCGAGGAGTCGGCGGCTGGTTATATCTCGTGGTTGAATGAGGCTTGCGCACAGCTCGAAGGGATTGGCCAGCGCATCGACGATGCCCTGAAGCAGGAGTGTCGTCGAGCGAGCCGCTATGCCAGAGGACATGTGCTAGCCTGCATCCGAGATCATCGTTCGCAGCTGCATCTCGAGTTCCTTCGCGAAGGGTTCTCGCGTTCTCGGAGGACACCTGCGGAGATCGACGGTCCTGCGGAGATCCGCTCCATGGATTGGCGTTGGCCGTCTGGTAGTTTTTGTATTATGTAGAAAAATATCTCAAGGAAGCATGTAATATACTTTGAAGTATTTATGACTTGTAAGAAATACTTGTAAAATAGAAAAGGAATCTATCT ]
[+] EMBL CB658365 [ GCGATCACCCTCTCACCACCGCTAGAGATCACCATTGTGAGGCTCCCCGGCCGGAGCAGGAGGTTAGAGGGAGTGGAGGAAGAGCCGTGCTGCCGCCGTCGCCATGGGGGAAGCCGGGTAGCCGCTGGACATCAAGAAACGCCGTCGAGCACCTTACGTCGCTGCCGTTTGCCCCTGTCCTGCACCGCGTCGAGCTCCACTTCGCTGCGTTTCGCCATCTCGCCATCTCGCGAAATTGTGTATCGATTAGTGGTGAGGCAACGTATGCAGCTTCCAGGAGGTGAAGGTTGATCAAGATTATACCAAGAATAAGAACTATCCTGAGCAGGACGTGACACCGAACCCCCTGGTTTGGCTGAACCATGGGCTGGCCCAAACCAGCCCATCTTCGGTTGGCGACTTCCTCTATTGCTTCACTTTGTAGACTTGTGAATTTTGGCCCAATTCATCGTGTCAATTCTGAGTTCTTGGCCCATTCATACATAAGTCTGGTTCTCGACATCGTCCGATTGATTTATCGTCTATGTTGATGTCGATTCTCCTCCACTTTAGTGTCATTCTCTACAAAAAGATATATTGATGTCGAGGATGTCCAGCAGCACGGGCAGCCCGATATGCCGGTGATCGTTCCGGCGCTCACACTCGAGCCGTTCGTGCTGTGGGAGGAAATTAGTCAGGGCCCGTCCGCGGAGGCAAACATGGCGATGACGTTGCTAGATTTCAAGAACATGTTGGCTGACCGAGCTCGTCGAATCCGATA ]
[-] EMBL CB658366 [ GTTCTCGACATCGTCCGATTGATTTATCGTCTATGTTGATGTCGATTCTCCTCCACTTTAGTGTCATTCTCTACAAAAAGATATATTGATGTCGAGGATGTCCAGCAGCACGGGCAGCCCGATATGCCGGTGATCGTTCCGGCGCTCACACTCGAGCCGTTCGTGCTGTGGGAGGAAATTAGTCAGGGCCCGTCCGCGGAGGCAAACATGGCGATGACGTTGCTAGATTTCAAGAACATGTTGGCTGACCGAGCTCGTCGAATCCGATATTGGAAGACGAAACTCGAGGTGGTGGAACTCAAAAAAAATCATGGTGCAGGTGAAGAAGGACCAGGCCATGGAAGCTCTCCGGGGGTCACGAGGTGTGGTTCAACTCGTACCTCAGGAGCTGTTGCACGTCGATGGCGAGGGTTTGCATGGAGCTCTGAGTTCCCCGCGAAGATCCCGAGGAGTCGGCGGCTGGTTATATCTCGTGGTTGAATGAGGCTTGCGCACAGCTCGAAGGGATTGGCCAGCGCATCGACGATGCCCTGAAGCAGGAGTGTCGTCGAGCGAGCCGCTATGCCAGAGGACATGTGCTAGCCTGCATCCGAGATCATCGTTCGCAGCTGCATCTCGAGTTCCTTCGCGAAGGGTTCTCGCGTTCTCGGAGGACACCTGCGGAGATCGACGGTCCTGCGGAGATCCGCTCCATGGATTGGCGTTGGCCGTCTGGTAGTTTTTGTATTATGTAGAAAAATATCTCAAGGAAGCATGTAATATACTTTGAAGTATTTATGACTTGTAAGAGATACTTGTAAAATAGAAAAGGAATCTATCTAAa ]
[-] EMBL CB652619 [ tAGATATATTGATGTCGAGGATGTCCAGCAGCACGGGCAGCCCGATATGCCGGTGATCGTTCCGGCGCTCACACTCGAGCCGTTCGTGCTGTGGGAGGAAATTAGTCAGGGCCCGTCCGCGGAGGCAAACATGGCGATGACGTTGCTAGATTTCAAGAACATGTTGGCTGACCGAGCTCGTCGAATCCGATATTGGAAGACGAAACTCGAGGTGGTGGAACTC AAAAAAATCATGGTGCAGGTGAAGAAGGACCAGGCCATGGAAGCTCTCCGGGGGTCACGAGGTGTGGTTCAACTCGTACCTCAGGAGCTGTTGCACGTCGATGGCGAGGGTTTGCATGGAGCTCTGAGTTCCCCGCGAAGATCCCGAGGAGTCGGCGGCTGGTTATATCTCGTGGTTGAATGAGGCTTGCGCACAGCTCGAAGGGATTGGCCAGCGCATCGACGATGCCCTGAAGCAGGAGTGTCGTCGAGCGAGCCGCTATGCCAGAGGACATGTGCTAGCCTGCATCCGAGATCATCGTTCGCAGCTGCATCTCGAGTTCCTTCGCGAAGGGTTCTCGCGTTCTCGGAGGACACCTGCGGAGATCGACGGTCCTGCGGAGATCCGCTCCATGGATTGGCGTTGGCCGTCTGGTAGTTTTTGTATTATGTAGAAAAATATCTCAAGGAAGCATGTAATATACTTTGAAGTATTTATGACTTGTAAGAAATACTTGTAAAATAGGAAAGGAATCTATCTAAGTTTTCTTACTCTGGG ]
[-] EMBL CB677587 [ GATGTCGAGGATGTCCAGCAGCACGGGCAGCCCGATATGCCGGTGATCGTTCCGGCGCTCACACTCGAGCCGTTCGTGCTGTGGGAGGAAATTAGTCAGGGCCCGTCCGCGGAGGCAAACATGGCGATGACGTTGCTAGATTTCAAGAACATGTTGGCTGACCGAGCTCGTCGAATCCGATATTGGAAGACGAAACTCGAGGTGGTGGAACTC AAAAAAATCATGGTGCAGGTGAAGAAGGACCAGGCCATGGAAGCTCTCCGGGGGTCACGAGGTGTGGTTCAACTCGTACCTCAGGAGCTGTTGCACGTCGATGGCGAGGGTTTGCATGGAGCTCTGAGTTCCCCGCGAAGATCCCGAGGAGTCGGCGGCTGGTTATATCTCGTGGTTGAATGAGGCTTGCGCACAGCTCGAAGGGATTGGCCAGCGCATCGACGATGCCCTGAAGCAGGAGTGTCGTCGAGCGAGCCGCTATGCCAGAGGACATGTGCTAGCCTGCATCCGAGATCATCGTTCGCAGCTGCATCTCGAGTTCCTTCGCGAAGGGTTCTCGCGTTCTCGGAGGACACCTGCGGAGATCGACGGTCCTGCGGAGATCCGCTCCATGGATTGGCGTTGGCCGTCTGGTAGTTTTTGTATTATGTAGAAAAATATCTCAAGGAAGCATGTAATATACTTTGAAGTATTTATGACTTGTAAGAAATACTTGTAAAATAGAAAAGGAATCTATCTAAGTTTTCTTACTCTGGGC]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||