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Oryza sativa
cluster # 8210 cluster # 8210       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8210#0 length = 1344 sequences # 5  

consensusID : consensus_8210#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1344
fasta sequence
                              [TTCATCGAACACCTTGCGATCACCCTCTCACCACCGCTAGAGATCACCATTGTGAGGCTCCCCGGCCGGAGCAGGAGGTTAGAGGGAGTGGAGGAAGAGCCGTGCTGCCGCCGTCGCCATGGGGGAAGCCGGGTAGCCGCTGGACATCAAGAAACGCCGTCGAGCACCTTACGTCGCTGCCGTTTGCCCCTGTCCTGCACCGCGTCGAGCTCCACTTCGCTGCGTTTCGCCATCTCGCCATCTCGCGAAATTGTGTATCGATTAGTGGTGAGGCAACGTATGCAGCTTCCAGGAGGTGAAGGTTGATCAAGATTATACCAAGAATAAGAACTATCCTGAGCAGGACGTGACACCGAACCCCCTGGTTTGGCTGAACCATGGGCTGGCCCAAACCAGCCCATCTTCGGTTGGCGACTTCCTCTATTGCTTCACTTTGTAGACTTGTGAATTTTGGCCCAATTCATCGTGTCAATTCTGAGTTCTTGGCCCATTCATACATAAGTCTGGTTCTCGACATCGTCCGATTGATTTATCGTCTATGTTGATGTCGATTCTCCTCCACTTTAGTGTCATTCTCTACAAAAAGATATATTGATGTCGAGGATGTCCAGCAGCACGGGCAGCCCGATATGCCGGTGATCGTTCCGGCGCTCACACTCGAGCCGTTCGTGCTGTGGGAGGAAATTAGTCAGGGCCCGTCCGCGGAGGCAAACATGGCGATGACGTTGCTAGATTTCAAGAACATGTTGGCTGACCGAGCTCGTCGAATCCGATATTGGAAGACGAAACTCGAGGTGGTGGAACTC-AAAAAAATCATGGTGCAGGTGAAGAAGGACCAGGCCATGGAAGCTCTCCGGGGGTCACGAGGTGTGGTTCAACTCGTACCTCAGGAGCTGTTGCACGTCGATGGCGAGGGTTTGCATGGAGCTCTGAGTTCCCCGCGAAGATCCCGAGGAGTCGGCGGCTGGTTATATCTCGTGGTTGAATGAGGCTTGCGCACAGCTCGAAGGGATTGGCCAGCGCATCGACGATGCCCTGAAGCAGGAGTGTCGTCGAGCGAGCCGCTATGCCAGAGGACATGTGCTAGCCTGCATCCGAGATCATCGTTCGCAGCTGCATCTCGAGTTCCTTCGCGAAGGGTTCTCGCGTTCTCGGAGGACACCTGCGGAGATCGACGGTCCTGCGGAGATCCGCTCCATGGATTGGCGTTGGCCGTCTGGTAGTTTTTGTATTATGTAGAAAAATATCTCAAGGAAGCATGTAATATACTTTGAAGTATTTATGACTTGTAAGAAATACTTGTAAAATAGAAAAGGAATCTATCTAAGTTTTCTTACTCTGGGC]

[+] EMBL AK065603             [TTCATCGAACACCTTGCGATCACCCTCTCACCACCGCTAGAGATCACCATTGTGAGGCTCCCCGGCCGGAGCAGGAGGTTAGAGGGAGTGGAGGAAGAGCCGTGCTGCCGCCGTCGCCATGGGGGAAGCCGGGTAGCCGCTGGACATCAAGAAACGCCGTCGAGCACCTTACGTCGCTGCCGTTTGCCCCTGTCCTGCACCGCGTCGAGCTCCACTTCGCTGCGTTTCGCCATCTCGCCATCTCGCGAAATTGTGTATCGATTAGTGGTGAGGCAACGTATGCAGCTTCCAGGAGGTGAAGGTTGATCAAGATTATACCAAGAATAAGAACTATCCTGAGCAGGACGTGACACCGAACCCCCTGGTTTGGCTGAACCATGGGCTGGCCCAAACCAGCCCATCTTCGGTTGGCGACTTCCTCTATTGCTTCACTTTGTAGACTTGTGAATTTTGGCCCAATTCATCGTGTCAATTCTGAGTTCTTGGCCCATTCATACATAAGTCTGGTTCTCGACATCGTCCGATTGATTTATCGTCTATGTTGATGTCGATTCTCCTCCACTTTAGTGTCATTCTCTACAAAAAGATATATTGATGTCGAGGATGTCCAGCAGCACGGGCAGCCCGATATGCCGGTGATCGTTCCGGCGCTCACACTCGAGCCGTTCGTGCTGTGGGAGGAAATTAGTCAGGGCCCGTCCGCGGAGGCAAACATGGCGATGACGTTGCTAGATTTCAAGAACATGTTGGCTGACCGAGCTCGTCGAATCCGATATTGGAAGACGAAACTCGAGGTGGTGGAACTC AAAAAAATCATGGTGCAGGTGAAGAAGGACCAGGCCATGGAAGCTCTCCGGGGGTCACGAGGTGTGGTTCAACTCGTACCTCAGGAGCTGTTGCACGTCGATGGCGAGGGTTTGCATGGAGCTCTGAGTTCCCCGCGAAGATCCCGAGGAGTCGGCGGCTGGTTATATCTCGTGGTTGAATGAGGCTTGCGCACAGCTCGAAGGGATTGGCCAGCGCATCGACGATGCCCTGAAGCAGGAGTGTCGTCGAGCGAGCCGCTATGCCAGAGGACATGTGCTAGCCTGCATCCGAGATCATCGTTCGCAGCTGCATCTCGAGTTCCTTCGCGAAGGGTTCTCGCGTTCTCGGAGGACACCTGCGGAGATCGACGGTCCTGCGGAGATCCGCTCCATGGATTGGCGTTGGCCGTCTGGTAGTTTTTGTATTATGTAGAAAAATATCTCAAGGAAGCATGTAATATACTTTGAAGTATTTATGACTTGTAAGAAATACTTGTAAAATAGAAAAGGAATCTATCT                   ]
[+] EMBL CB658365             [               GCGATCACCCTCTCACCACCGCTAGAGATCACCATTGTGAGGCTCCCCGGCCGGAGCAGGAGGTTAGAGGGAGTGGAGGAAGAGCCGTGCTGCCGCCGTCGCCATGGGGGAAGCCGGGTAGCCGCTGGACATCAAGAAACGCCGTCGAGCACCTTACGTCGCTGCCGTTTGCCCCTGTCCTGCACCGCGTCGAGCTCCACTTCGCTGCGTTTCGCCATCTCGCCATCTCGCGAAATTGTGTATCGATTAGTGGTGAGGCAACGTATGCAGCTTCCAGGAGGTGAAGGTTGATCAAGATTATACCAAGAATAAGAACTATCCTGAGCAGGACGTGACACCGAACCCCCTGGTTTGGCTGAACCATGGGCTGGCCCAAACCAGCCCATCTTCGGTTGGCGACTTCCTCTATTGCTTCACTTTGTAGACTTGTGAATTTTGGCCCAATTCATCGTGTCAATTCTGAGTTCTTGGCCCATTCATACATAAGTCTGGTTCTCGACATCGTCCGATTGATTTATCGTCTATGTTGATGTCGATTCTCCTCCACTTTAGTGTCATTCTCTACAAAAAGATATATTGATGTCGAGGATGTCCAGCAGCACGGGCAGCCCGATATGCCGGTGATCGTTCCGGCGCTCACACTCGAGCCGTTCGTGCTGTGGGAGGAAATTAGTCAGGGCCCGTCCGCGGAGGCAAACATGGCGATGACGTTGCTAGATTTCAAGAACATGTTGGCTGACCGAGCTCGTCGAATCCGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB658366             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTTCTCGACATCGTCCGATTGATTTATCGTCTATGTTGATGTCGATTCTCCTCCACTTTAGTGTCATTCTCTACAAAAAGATATATTGATGTCGAGGATGTCCAGCAGCACGGGCAGCCCGATATGCCGGTGATCGTTCCGGCGCTCACACTCGAGCCGTTCGTGCTGTGGGAGGAAATTAGTCAGGGCCCGTCCGCGGAGGCAAACATGGCGATGACGTTGCTAGATTTCAAGAACATGTTGGCTGACCGAGCTCGTCGAATCCGATATTGGAAGACGAAACTCGAGGTGGTGGAACTCAAAAAAAATCATGGTGCAGGTGAAGAAGGACCAGGCCATGGAAGCTCTCCGGGGGTCACGAGGTGTGGTTCAACTCGTACCTCAGGAGCTGTTGCACGTCGATGGCGAGGGTTTGCATGGAGCTCTGAGTTCCCCGCGAAGATCCCGAGGAGTCGGCGGCTGGTTATATCTCGTGGTTGAATGAGGCTTGCGCACAGCTCGAAGGGATTGGCCAGCGCATCGACGATGCCCTGAAGCAGGAGTGTCGTCGAGCGAGCCGCTATGCCAGAGGACATGTGCTAGCCTGCATCCGAGATCATCGTTCGCAGCTGCATCTCGAGTTCCTTCGCGAAGGGTTCTCGCGTTCTCGGAGGACACCTGCGGAGATCGACGGTCCTGCGGAGATCCGCTCCATGGATTGGCGTTGGCCGTCTGGTAGTTTTTGTATTATGTAGAAAAATATCTCAAGGAAGCATGTAATATACTTTGAAGTATTTATGACTTGTAAGAGATACTTGTAAAATAGAAAAGGAATCTATCTAAa                ]
[-] EMBL CB652619             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       tAGATATATTGATGTCGAGGATGTCCAGCAGCACGGGCAGCCCGATATGCCGGTGATCGTTCCGGCGCTCACACTCGAGCCGTTCGTGCTGTGGGAGGAAATTAGTCAGGGCCCGTCCGCGGAGGCAAACATGGCGATGACGTTGCTAGATTTCAAGAACATGTTGGCTGACCGAGCTCGTCGAATCCGATATTGGAAGACGAAACTCGAGGTGGTGGAACTC AAAAAAATCATGGTGCAGGTGAAGAAGGACCAGGCCATGGAAGCTCTCCGGGGGTCACGAGGTGTGGTTCAACTCGTACCTCAGGAGCTGTTGCACGTCGATGGCGAGGGTTTGCATGGAGCTCTGAGTTCCCCGCGAAGATCCCGAGGAGTCGGCGGCTGGTTATATCTCGTGGTTGAATGAGGCTTGCGCACAGCTCGAAGGGATTGGCCAGCGCATCGACGATGCCCTGAAGCAGGAGTGTCGTCGAGCGAGCCGCTATGCCAGAGGACATGTGCTAGCCTGCATCCGAGATCATCGTTCGCAGCTGCATCTCGAGTTCCTTCGCGAAGGGTTCTCGCGTTCTCGGAGGACACCTGCGGAGATCGACGGTCCTGCGGAGATCCGCTCCATGGATTGGCGTTGGCCGTCTGGTAGTTTTTGTATTATGTAGAAAAATATCTCAAGGAAGCATGTAATATACTTTGAAGTATTTATGACTTGTAAGAAATACTTGTAAAATAGGAAAGGAATCTATCTAAGTTTTCTTACTCTGGG ]
[-] EMBL CB677587             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GATGTCGAGGATGTCCAGCAGCACGGGCAGCCCGATATGCCGGTGATCGTTCCGGCGCTCACACTCGAGCCGTTCGTGCTGTGGGAGGAAATTAGTCAGGGCCCGTCCGCGGAGGCAAACATGGCGATGACGTTGCTAGATTTCAAGAACATGTTGGCTGACCGAGCTCGTCGAATCCGATATTGGAAGACGAAACTCGAGGTGGTGGAACTC AAAAAAATCATGGTGCAGGTGAAGAAGGACCAGGCCATGGAAGCTCTCCGGGGGTCACGAGGTGTGGTTCAACTCGTACCTCAGGAGCTGTTGCACGTCGATGGCGAGGGTTTGCATGGAGCTCTGAGTTCCCCGCGAAGATCCCGAGGAGTCGGCGGCTGGTTATATCTCGTGGTTGAATGAGGCTTGCGCACAGCTCGAAGGGATTGGCCAGCGCATCGACGATGCCCTGAAGCAGGAGTGTCGTCGAGCGAGCCGCTATGCCAGAGGACATGTGCTAGCCTGCATCCGAGATCATCGTTCGCAGCTGCATCTCGAGTTCCTTCGCGAAGGGTTCTCGCGTTCTCGGAGGACACCTGCGGAGATCGACGGTCCTGCGGAGATCCGCTCCATGGATTGGCGTTGGCCGTCTGGTAGTTTTTGTATTATGTAGAAAAATATCTCAAGGAAGCATGTAATATACTTTGAAGTATTTATGACTTGTAAGAAATACTTGTAAAATAGAAAAGGAATCTATCTAAGTTTTCTTACTCTGGGC]


>consensus_8210#0 TTCATCGAACACCTTGCGATCACCCTCTCACCACCGCTAGAGATCACCATTGTGAGGCTC CCCGGCCGGAGCAGGAGGTTAGAGGGAGTGGAGGAAGAGCCGTGCTGCCGCCGTCGCCAT GGGGGAAGCCGGGTAGCCGCTGGACATCAAGAAACGCCGTCGAGCACCTTACGTCGCTGC CGTTTGCCCCTGTCCTGCACCGCGTCGAGCTCCACTTCGCTGCGTTTCGCCATCTCGCCA TCTCGCGAAATTGTGTATCGATTAGTGGTGAGGCAACGTATGCAGCTTCCAGGAGGTGAA GGTTGATCAAGATTATACCAAGAATAAGAACTATCCTGAGCAGGACGTGACACCGAACCC CCTGGTTTGGCTGAACCATGGGCTGGCCCAAACCAGCCCATCTTCGGTTGGCGACTTCCT CTATTGCTTCACTTTGTAGACTTGTGAATTTTGGCCCAATTCATCGTGTCAATTCTGAGT TCTTGGCCCATTCATACATAAGTCTGGTTCTCGACATCGTCCGATTGATTTATCGTCTAT GTTGATGTCGATTCTCCTCCACTTTAGTGTCATTCTCTACAAAAAGATATATTGATGTCG AGGATGTCCAGCAGCACGGGCAGCCCGATATGCCGGTGATCGTTCCGGCGCTCACACTCG AGCCGTTCGTGCTGTGGGAGGAAATTAGTCAGGGCCCGTCCGCGGAGGCAAACATGGCGA TGACGTTGCTAGATTTCAAGAACATGTTGGCTGACCGAGCTCGTCGAATCCGATATTGGA AGACGAAACTCGAGGTGGTGGAACTCAAAAAAATCATGGTGCAGGTGAAGAAGGACCAGG CCATGGAAGCTCTCCGGGGGTCACGAGGTGTGGTTCAACTCGTACCTCAGGAGCTGTTGC ACGTCGATGGCGAGGGTTTGCATGGAGCTCTGAGTTCCCCGCGAAGATCCCGAGGAGTCG GCGGCTGGTTATATCTCGTGGTTGAATGAGGCTTGCGCACAGCTCGAAGGGATTGGCCAG CGCATCGACGATGCCCTGAAGCAGGAGTGTCGTCGAGCGAGCCGCTATGCCAGAGGACAT GTGCTAGCCTGCATCCGAGATCATCGTTCGCAGCTGCATCTCGAGTTCCTTCGCGAAGGG TTCTCGCGTTCTCGGAGGACACCTGCGGAGATCGACGGTCCTGCGGAGATCCGCTCCATG GATTGGCGTTGGCCGTCTGGTAGTTTTTGTATTATGTAGAAAAATATCTCAAGGAAGCAT GTAATATACTTTGAAGTATTTATGACTTGTAAGAAATACTTGTAAAATAGAAAAGGAATC TATCTAAGTTTTCTTACTCTGGGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)