These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8219#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2610 fasta sequence [AGGGGTAAAGGTGTGTGAGGTGAAGGCGAGGGGAGAAGCGAGAAGCTCGTGAGCAGCAGCGGTGTGTGTGTGTGTGTGTGTGTGTGCGTGGGGCGAAGGGAGGGGAAGATTTTTTTGAGAAGGAGAACTTGTTGCTCCGGGCGTTTCTTGGGCGCCGCCATGGACGCCTACGAGGCGACCAAGGTGGTGTTCTCCCGGATCCAGGCGCTGGACCCTGACCACGCCGCCAAGATCATGGGCCTCCTGCTCATCCAGGACCACGGCGACAAGGAGATGATACGCCTCGCCTTCGGCCCCGAGGCGCTGCTCCACAGCGTCATGGCGCAGGCTCGCAAGGAGCTCGCCCTCCTCCCGCCGCCGCCGCCGCCGTCGTCGTCGTCGCCCACCGTGCCGGCGGCCCACTCGCCGTTCCTGCTGTCGCGGCAGAACTCCGGCCGCGGCCCCGCGCCGTCGCCGTCGCCGCTGTCCGCGTCCTCGCCGTCCTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGCAATGGGTCCGTGGATGAGGTGGTGGGCGCTGGGGAGGAGCTAATCAGCCCGGCGAACAGCGGGGGAGGCGCCGCGGCGAACGCGCCGCCCTTCTTTCCTCGGGGTGGGGACGTGCTCCTGGACGACTTCCAGCTGCAGGAGCAGCTCGCGTTCCTCAACGAGGGGGGTGTCAACCCCAGCCACCCTCTCCAGGGGTTCGATGGAGCGGAGTGCCGGAGCCCCGGTCCCGGCGAGGGCGGCGGGATGTTCCCGTACGGTCTCGGCTGGGCAAACGGTGGCCCTGGGCACCGCCGGAGCGCGTCGGTCAACGAGCTCTGCCTCGGCGGCGGCAGCAGCGACGGCTTCGGGTGGAAGCCTTGCCTGTACTACGCGCGCGGGTTCTGCAAGAACGGCAGCAGCTGCAGGTTCGTCCACGGCGACGACGCCGCCGCTCTGACGGGCGCCGCCATGGACGCGGCCACCGCCGAGCAGCAGCAGTGCCAGGATTTCCTCCTCCGTTCCAAGAGCCAGCGCCTCGGCCCTGCTGCCTTCCCCTATTCACCCACAGGGTCGCTCCCCGGCTCGCCATCCGCCGCCACCAAGTGCCTCAGCCTCTTGCTGCAGCAGCAGCACAACGACAACCAAAGAGCCGCGGCGGCGGCGGCGCTGATGCTCGGCGGCAGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGACTTTGCCAGCATGATGAACCCCGGATCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCCGCGAGGAGGACGTCTCCAACTACTTCAGCATCTACGGTCCGGTGCACGACGTGCGCATCCCGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTGTACCCTGAGACGGTGAAGCTGATCTTGGCCAAGGGCAATCCGCATTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCTTACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGAAACATCAAGGTGACTTCTCCGGCTGCACGACCCCCACTGGCCTGGACGGCAGAGACCCATTCGATCTGCATCAGCTCGGTGCGAGGATGCTGCAGCACTCCAATAGCACAAACGAGATGATGCTTCGTAGGAAACTGGAGGAGCAGCAGCAGGCTGCCGAGCTGCAACAGGCCATCGAACTCCACAGTCGCCGTCTCATGGACCTCCAGCTGCTCGACCTCAAGAATAGAGCCGCAGCTGCTGTCACAACAGCAATGGCGATGACAATTCCCACCGCCAATGCCTTCGGTTCCAGTCAGCCTCTTGCCACCACCATGGTCGAGTCACCGCCTGATTCTGGCGAGCAGCTCAAGGGAACAGGTTACTTCACAGAAGAGAGGAAAATGGTCAACGGAGGAGGTGATAAGGAAGAATCTGCTGGTGAGGCGAGCCTGAATGCTGATAGCGACCAAAGCTTGGAGCACAATTTGCCGGACAGCCCGTTTGCTTCGCCGACTAAGTCCTCTGTCTCAGCTCACCAAAGTTTCACCACCACTGATACCGGTGTCGTCGCGACAAGTAGCTGCAGTGCATCTCATGTAGGCATCAGCGCGGGCACTAATGCTGGAGGTGGAATCAACCATCTGCGGCCCTCTACTTTGGATATACCTTCGCCAAGAGACTTCTTCTCGGTTTCCAGGCTGGCCTCTGATCACGGAGCGATTGGGATGTAAAGTTCTCTGCAATGGATGAGTGAATCCCCCAGCCTAATCATAGAACACAAGAAGCAAAAGAAAAGCGATAGTGGAATATAGGAGAAAAGGAGTGAAGTGTCAGCATAGTGTTAGCTCCCTTGTTTATTTCTTTTTGGTTGCCCTTTTTAGTGGGTAGCTCTATTAAAACCACAAGTGAAGATGCCATTAGCC-TTTGACTAGG--AAAAAAGCCAGTAGATGCAGACATGCAGTGTTGTGAGATACTTAATATATATAAGCAATCCAGTGTTACCCCCTTATAATATTAGATATACTAGTAGTACTCAATTACAACTGGCATCAACAACATATATAGNTGATGTTTACCCAGTTGTCATCTAAGTTGTAGGCNCTAACTGNGAAGTNACT] [+] EMBL AK102616 [AGGGGTAAAGGTGTGTGAGGTGAAGGCGAGGGGAGAAGCGAGAAGCTCGTGAGCAGCAGCGGTGTGTGTGTGTGTGTGTGTGTGTGCGTGGGGCGAAGGGAGGGGAAGATTTTTTTGAGAAGGAGAACTTGTTGCTCCGGGCGTTTCTTGGGCGCCGCCATGGACGCCTACGAGGCGACCAAGGTGGTGTTCTCCCGGATCCAGGCGCTGGACCCTGACCACGCCGCCAAGATCATGGGCCTCCTGCTCATCCAGGACCACGGCGACAAGGAGATGATACGCCTCGCCTTCGGCCCCGAGGCGCTGCTCCACAGCGTCATGGCGCAGGCTCGCAAGGAGCTCGCCCTCCTCCCGCCGCCGCCGCCGCCGTCGTCGTCGTCGCCCACCGTGCCGGCGGCCCACTCGCCGTTCCTGCTGTCGCGGCAGAACTCCGGCCGCGGCCCCGCGCCGTCGCCGTCGCCGCTGTCCGCGTCCTCGCCGTCCTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGCAATGGGTCCGTGGATGAGGTGGTGGGCGCTGGGGAGGAGCTAATCAGCCCGGCGAACAGCGGGGGAGGCGCCGCGGCGAACGCGCCGCCCTTCTTTCCTCGGGGTGGGGACGTGCTCCTGGACGACTTCCAGCTGCAGGAGCAGCTCGCGTTCCTCAACGAGGGGGGTGTCAACCCCAGCCACCCTCTCCAGGGGTTCGATGGAGCGGAGTGCCGGAGCCCCGGTCCCGGCGAGGGCGGCGGGATGTTCCCGTACGGTCTCGGCTGGGCAAACGGTGGCCCTGGGCACCGCCGGAGCGCGTCGGTCAACGAGCTCTGCCTCGGCGGCGGCAGCAGCGACGGCTTCGGGTGGAAGCCTTGCCTGTACTACGCGCGCGGGTTCTGCAAGAACGGCAGCAGCTGCAGGTTCGTCCACGGCGACGACGCCGCCGCTCTGACGGGCGCCGCCATGGACGCGGCCACCGCCGAGCAGCAGCAGTGCCAGGATTTCCTCCTCCGTTCCAAGAGCCAGCGCCTCGGCCCTGCTGCCTTCCCCTATTCACCCACAGGGTCGCTCCCCGGCTCGCCATCCGCCGCCACCAAGTGCCTCAGCCTCTTGCTGCAGCAGCAGCACAACGACAACCAAAGAGCCGCGGCGGCGGCGGCGCTGATGCTCGGCGGCAGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGACTTTGCCAGCATGATGAACCCCGGATCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCCGCGAGGAGGACGTCTCCAACTACTTCAGCATCTACGGTCCGGTGCACGACGTGCGCATCCCGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTGTACCCTGAGACGGTGAAGCTGATCTTGGCCAAGGGCAATCCGCATTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCTTACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGAAACATCAAGGTGACTTCTCCGGCTGCACGACCCCCACTGGCCTGGACGGCAGAGACCCATTCGATCTGCATCAGCTCGGTGCGAGGATGCTGCAGCACTCCAATAGCACAAACGAGATGATGCTTCGTAGGAAACTGGAGGAGCAGCAGCAGGCTGCCGAGCTGCAACAGGCCATCGAACTCCACAGTCGCCGTCTCATGGACCTCCAGCTGCTCGACCTCAAGAATAGAGCCGCAGCTGCTGTCACAACAGCAATGGCGATGACAATTCCCACCGCCAATGCCTTCGGTTCCAGTCAGCCTCTTGCCACCACCATGGTCGAGTCACCGCCTGATTCTGGCGAGCAGCTCAAGGGAACAGGTTACTTCACAGAAGAGAGGAAAATGGTCAACGGAGGAGGTGATAAGGAAGAATCTGCTGGTGAGGCGAGCCTGAATGCTGATAGCGACCAAAGCTTGGAGCACAATTTGCCGGACAGCCCGTTTGCTTCGCCGACTAAGTCCTCTGTCTCAGCTCACCAAAGTTTCACCACCACTGATACCGGTGTCGTCGCGACAAGTAGCTGCAGTGCATCTCATGTAGGCATCAGCGCGGGCACTAATGCTGGAGGTGGAATCAACCATCTGCGGCCCTCTACTTTGGATATACCTTCGCCAAGAGACTTCTTCTCGGTTTCCAGGCTGGCCTCTGATCACGGAGCGATTGGGATGTAAAGTTCTCTGCAATGGATGAGTGAATCCCCCAGCCTAATCATAGAACACAAGAAGCAAAAGAAAAGCGATAGTGGAATATAGGAGAAAAGGAGTGAAGTGTCAGCATAGTGTTAGCTCCCTTGTTTATTTCTTTTTGGTTGCCCTTTTTAGTGGGTAGCTCTATTAAAACCACAAGTGAAGATGCCATTAGCC TTTGACTAGG AAAAAAGCCAGTAGATGCAGACATGCAGTGTTGTGAGATACTTAATATATATAAGCAATCCAGTGTTACCCCCTTATAATATTAGATATACTAGTAGTACTCAATTACAACT ] [+] EMBL BP184770 [ AGGATGCTGCAGCACTCCAATAGCACAAACGAGATGATGCTTCGTAGGAAACTGGAGGAGCAGCAGCAGGCTGCCGAGCTGCAACAGGCCATCGAACTCCACAGTCGCCGTCTCATGGACCTCCAGCTGCTCGACCTCAAGAATAGAGCCGCAGCTGCTGTCACAACAGCAATGGCGATGACAATTCCCACCGCCAATGCCTTCGGTTCCAGTCAGCCTCTTGCCACCACCATGGTCGAGTCACCGCCTGATTCTGGCGAGCAGCTCAAGGGAACAGGTTACTTCACAGAAGAGAGGAAAATGGTCAACGGAGGAGGTGATAAGGAAGAATCTGCTGGTGAGGCGAGCCTGAATGCTGATAGCGACCAAAGCTTGGAGCACAATTTGCCGGACAGCCCGTTTGCTTCGCCGACTAAGTCCTCTGTCTCAGCTCACCAAAGTTTCACCACCACTGATACCGGTGTCGTCGCGACAAGTAGCTGCAGTGCATCTCATGTAGGCATCAGCGCGGGCACTAATGCTGGAGGTGGAATCAACCATCTGCGGCCCTCTACTTTGGATATACCTTCGCCAAGAGACTTCTTCTCGGTTTCCAGGCTGGCCTCTGATCACGGAGCGAT ] [+] EMBL CA767102 [ CAATTCCCACCGCCAATGCCTTCGGTTCCAGTCAGCCTCTTGCCACCACCATGGTCGAGTCACCGCCTGATTCTGGCGAGCAGCTCAAGGGAACAGGTTACTTCACAGAAGAGAGGAAAATGGTCAACGGAGGAGGTGATAAGGAAGAATCTGCTGGTGAGGCGAGCCTGAATGCTGATAGCGACCAAAGCTTGGAGCACAATTTGCCGGACGGCCCGTTTGCTTCGCCGACTAAGTCCTCTGTCTCAGCTCACCAAAGTTTCACCACCACTGATACCGGTGTCGTCGCGACAAGTAGCTGCAGTGCATCTCATGTAGGCATCAGCGCGGGCACTAATGCTGGAGGTGGAATCAACCATCTGCGGCCCTCTACTTTGGATATACCTTCGCCAAGAGACTTCTTCTCGGTTTCCAGGCTGGCCTCTGATCACGGAGCGATTGGGATGTAAAGTTCTCTGCAATGGATGAGTGAATCCCCCAGCCTAATCATAGAACACAAGAAGCAAAAGAAAAGCGATAGTGGAATATAGGAGAAAAGGAGTGAAGTGTCAGCATAGTGTTAGCTCCCTTCTTTATTTCTTTTTGGTTGCCCTTTTTAGTGGGTAGCTCTATTAAAACCACAAGTGAAGATGCCATTAGCCTTTTGACTAGGAAAAAAAAGCCAGTAGATGCAGACATGCAGTGTTGTGAGATACTTAATATATATAAGCAATCCAGTGTTACCCCCTTATAATATTAGATATACTAGGAGTACTCAATTACAACTGGCATCAACAACATATATAGNTGATGTTTACCCAGTTGTCATCTAAGTTGTAGGCNCTAACTGNGAAGTNACT] consensusID : consensus_8219#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2211 fasta sequence [CGTCGCCGTCGTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGTAACAGCATGGGCAATGGCGGCGCCGCGGATGAGATGGTCGGCGCTGGGGAGGAGCTAATGAGCCCCTTGAACGGCGGGGGAGGCGCCGCGGCGAACGCCCCGCCCTTCTTTCCTCGGGGTGGGGACGCGCTCCTGGACGACTTCGAGCTGCAGGAGCAGCTCGCGTTCCTGCACGACGGAGCCGGGGCGTGAACCCCGGGCATGCTCTCCAGGCGTTCGACGGAGCGGAGTGCCGGAGCCCCGGCACCGGCGAGAGCGGCGGGATGCTCCCCTACGGCCTCGCCTGGGCCAACGGCGGCCCTGGGCACCGCCGCAGCGCGTCGGTGAACGAGCTCTGCCTCGGCGGCGACGGCTTCGGGTGGAAACCTTGCCTGTACTACGCGCGCGGGTTCTGCAAGAACGGCAGCACCTGCAGGTTCGTCCATGGCGGCCTCTCCGACGACGCCGCCATGGACGCAACCACCGCCGAACAGCAGCAGTGCCAGGATTTCCTCCTCCGCTCCAAGAGCCAGCGCCTCGGCCCCGCCGCCTTCCCGTTCACCCCCACAGGCTCTCTCCCTGCCTCGCCATCCGCCACCAGCAAGTGCCTCAGCCTCCTCCTGCAGCAGCAGCAGCAGCACAACGACAACCAAAGAGCCGCCGCGGCCGCGCTGATGCTCGCCGGCGGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGATTTCGCCAGCATGATGAACCCCGGGTCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCCGCGAGGAGGACGTCTCCAACTACTTCAGCATCTACGGGCCGGTGCACGACGTGCGCATCCCGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTTTACCCGGAGACGGTGAAGCTGATCTTGGCCAAGGGCAACCCGCACTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCCTACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGAAGCAGCAGCAAGGCGATTTCTGCTGCATGTCGCCCACGGGGTTAGACGCCAGGGACCCCTTTGATTTTCACCAGCTCGGTGCAAGGATGCTGCAGCACTCCAACAGCGCGAACGAGCTAATGCTGCGGCGGAAGCTCGAGGAGCAGCAACAGGCGGCGGAGCTGCAGCAGGCTATTGATCTCCATAGCCGCCGCCTCATTGGCCTCCAGCTGCTCGACCTCAAGTCTTCTGCCGCTGTCCATGCGGCGGAGACGACAACAATGTCTCTGCCCACTCCGATCACCAATGCCTTCACCTCCGGCCAACCCGGTGCCACCACAATCGTCGAGTCACCGCCTAGCTCTACTGGGCAACTGATGGCGAGCTGCGGCTCTCCATCGGAGGGGAAAGTTGTCAATGGTGGTAATAAGGCGGATTCTGCCGGTGAGGTTACCCGCAATGCCGATAGTGACCAAAGTGGTGAGCACAACTTGCCAGACAGCCCGTTTGCTTCCTCTACCAAGTCGACCGCATTCTTTACCGCAACCGCTGCCACTGCCATTGGTAGCGAGGGAGATTTCACCACCGGTAGTAGCTGCAATATTGGTGGCAGTGCGGTCGGCAGCGCCAACCCTCTCCGGCCTCCCACATTGGACATACCTTCGCCAAGGACCTGCTTCTTCCCCATGCCCAGGCTGTCCGAGCACGGGGCGATCGGGATGTAAAGTAGTCCACAATGGAAGTGGCTGAAACCCTCTCCAGAAATCATAGAATACATGAAGCAAAGAAAGTGTTATCGGAATATAGGGGAAAAAAGGAGTGGAGTGTCAGCGTAGTTTTTAGGATGTTTAGCTCCCCTTTCTTTTCGTTTTTAAGCTTCTCTCACCTTTTAGTGGATAGCTCCATTAAACAACACGAGAAGAAGAAGATGCCATTAGCCCTTATGGAAGAAAAAGTGGCAGCATATGAAGTATTGTGATATACTACTATATATAATACTACTCTATATATATATAAATAATTTAGTGGTGCGCCTAATTATACTAGAGAATATAGTACTATGTGGCAGTTAGCAGTTATTTTGTTTACTACTGCCATCAGACAATTGATGTTGTTACCCAGTTCTTCCATGTATAACAACTACTCGTATATTATACTGATTCTGTGGTTAATCCTGGAGGCAAGTGCC] [+] EMBL AK102918 [CGTCGCCGTCGTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGTAACAGCATGGGCAATGGCGGCGCCGCGGATGAGATGGTCGGCGCTGGGGAGGAGCTAATGAGCCCCTTGAACGGCGGGGGAGGCGCCGCGGCGAACGCCCCGCCCTTCTTTCCTCGGGGTGGGGACGCGCTCCTGGACGACTTCGAGCTGCAGGAGCAGCTCGCGTTCCTGCACGACGGAGCCGGGGCGTGAACCCCGGGCATGCTCTCCAGGCGTTCGACGGAGCGGAGTGCCGGAGCCCCGGCACCGGCGAGAGCGGCGGGATGCTCCCCTACGGCCTCGCCTGGGCCAACGGCGGCCCTGGGCACCGCCGCAGCGCGTCGGTGAACGAGCTCTGCCTCGGCGGCGACGGCTTCGGGTGGAAACCTTGCCTGTACTACGCGCGCGGGTTCTGCAAGAACGGCAGCACCTGCAGGTTCGTCCATGGCGGCCTCTCCGACGACGCCGCCATGGACGCAACCACCGCCGAACAGCAGCAGTGCCAGGATTTCCTCCTCCGCTCCAAGAGCCAGCGCCTCGGCCCCGCCGCCTTCCCGTTCACCCCCACAGGCTCTCTCCCTGCCTCGCCATCCGCCACCAGCAAGTGCCTCAGCCTCCTCCTGCAGCAGCAGCAGCAGCACAACGACAACCAAAGAGCCGCCGCGGCCGCGCTGATGCTCGCCGGCGGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGATTTCGCCAGCATGATGAACCCCGGGTCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCCGCGAGGAGGACGTCTCCAACTACTTCAGCATCTACGGGCCGGTGCACGACGTGCGCATCCCGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTTTACCCGGAGACGGTGAAGCTGATCTTGGCCAAGGGCAACCCGCACTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCCTACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGAAGCAGCAGCAAGGCGATTTCTGCTGCATGTCGCCCACGGGGTTAGACGCCAGGGACCCCTTTGATTTTCACCAGCTCGGTGCAAGGATGCTGCAGCACTCCAACAGCGCGAACGAGCTAATGCTGCGGCGGAAGCTCGAGGAGCAGCAACAGGCGGCGGAGCTGCAGCAGGCTATTGATCTCCATAGCCGCCGCCTCATTGGCCTCCAGCTGCTCGACCTCAAGTCTTCTGCCGCTGTCCATGCGGCGGAGACGACAACAATGTCTCTGCCCACTCCGATCACCAATGCCTTCACCTCCGGCCAACCCGGTGCCACCACAATCGTCGAGTCACCGCCTAGCTCTACTGGGCAACTGATGGCGAGCTGCGGCTCTCCATCGGAGGGGAAAGTTGTCAATGGTGGTAATAAGGCGGATTCTGCCGGTGAGGTTACCCGCAATGCCGATAGTGACCAAAGTGGTGAGCACAACTTGCCAGACAGCCCGTTTGCTTCCTCTACCAAGTCGACCGCATTCTTTACCGCAACCGCTGCCACTGCCATTGGTAGCGAGGGAGATTTCACCACCGGTAGTAGCTGCAATATTGGTGGCAGTGCGGTCGGCAGCGCCAACCCTCTCCGGCCTCCCACATTGGACATACCTTCGCCAAGGACCTGCTTCTTCCCCATGCCCAGGCTGTCCGAGCACGGGGCGATCGGGATGTAAAGTAG ] [+] EMBL AK064318 [ CAGCCCGTTTGCTTCCTCTACCAAGTCGACCGCATTCTTTACCGCAACCGCTGCCACTGCCATTGGTAGCGAGGGAGATTTCACTACCGGTAGTAGCTGCAATATTGGTGGCAGTGCGGTCGGCAGCGCCAACCCTCTCCGGCCTCCCACATTGGACATACCTTCGCCAAGGACCTGCTTCTTCCCCATGCCCAGGCTGTCCGAGCACGGGGCGATCGGGATGTAAAGTAGTCCACAATGGAAGTGGCTGAAACCCTCTCCAGAAATCATAGAATACATGAAGCAAAGAAAGTGTTATCGGAATATAGGGGAAAAAAGGAGTGGAGTGTCAGCGTAGTTTTTAGGATGTTTAGCTCCCCTTTCTTTTCGTTTTTAAGCTTCTCTCACCTTTTAGTGGATAGCTCCATTAAACAACACGAGAAGAAGAAGATGCCATTAGCCCTTATGGAAGAAAAAGTGGCAGCATATGAAGTATTGTGATATACTACTATATATAATACTACTCTATATATATATAAATAATTTAGTGGTGCGCCTAATTATACTAGAGAATATAGTACTATGTGGCAGTTAGCAGTTATTTTGTTTACTACTGCCATCAGACAATTGATGTTGTTACCCAGTTCTTCCATGTATAACAACTACTCGTATATTATACTGATTCTGTGGTTAATCCTGGAGGCAAGTGCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8219#0 AGGGGTAAAGGTGTGTGAGGTGAAGGCGAGGGGAGAAGCGAGAAGCTCGTGAGCAGCAGC 60 consensus_8219#1 ------------------------------------------------------------ consensus_8219#0 GGTGTGTGTGTGTGTGTGTGTGTGTGCGTGGGGCGAAGGGAGGGGAAGATTTTTTTGAGA 120 consensus_8219#1 ------------------------------------------------------------ consensus_8219#0 AGGAGAACTTGTTGCTCCGGGCGTTTCTTGGGCGCCGCCATGGACGCCTACGAGGCGACC 180 consensus_8219#1 ------------------------------------------------------------ consensus_8219#0 AAGGTGGTGTTCTCCCGGATCCAGGCGCTGGACCCTGACCACGCCGCCAAGATCATGGGC 240 consensus_8219#1 ------------------------------------------------------------ consensus_8219#0 CTCCTGCTCATCCAGGACCACGGCGACAAGGAGATGATACGCCTCGCCTTCGGCCCCGAG 300 consensus_8219#1 ------------------------------------------------------------ consensus_8219#0 GCGCTGCTCCACAGCGTCATGGCGCAGGCTCGCAAGGAGCTCGCCCTCCTCCCGCCGCCG 360 consensus_8219#1 ------------------------------------------------------------ consensus_8219#0 CCGCCGCCGTCGTCGTCGTCGCCCACCGTGCCGGCGGCCCACTCGCCGTTCCTGCTGTCG 420 consensus_8219#1 ------------------------------------------------------------ consensus_8219#0 CGGCAGAACTCCGGCCGCGGCCCCGCGCCGTCGCCGTCGCCGCTGTCCGCGTCCTCGCCG 480 consensus_8219#1 ----------------------------------------------------CGTCGCCG 8 * ****** consensus_8219#0 TCCTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGCAA-----TGGGT----------CC 525 consensus_8219#1 TCGTCGTGGGCGCAGGCGCAGCCGTTCTCGAGGAGTAACAGCATGGGCAATGGCGGCGCC 68 ** ******************************** ** **** ** consensus_8219#0 GTGGATGAGGTGGTGGGCGCTGGGGAGGAGCTAATCAGCCCGGCGAACAGCGGGGGAGGC 585 consensus_8219#1 GCGGATGAGATGGTCGGCGCTGGGGAGGAGCTAATGAGCCCCTTGAACGGCGGGGGAGGC 128 * ******* **** ******************** ***** **** *********** consensus_8219#0 GCCGCGGCGAACGCGCCGCCCTTCTTTCCTCGGGGTGGGGACGTGCTCCTGGACGACTTC 645 consensus_8219#1 GCCGCGGCGAACGCCCCGCCCTTCTTTCCTCGGGGTGGGGACGCGCTCCTGGACGACTTC 188 ************** **************************** **************** consensus_8219#0 CAGCTGCAGGAGCAGCTCGCGTTCCTCAACGAGGG-----GGGTGTCAACCCCAGCCACC 700 consensus_8219#1 GAGCTGCAGGAGCAGCTCGCGTTCCTGCACGACGGAGCCGGGGCGTGAACCCCGGGCATG 248 ************************* **** ** *** ** ****** * ** consensus_8219#0 CTCTCCAGGGGTTCGATGGAGCGGAGTGCCGGAGCCCCGGTCCCGGCGAGGGCGGCGGGA 760 consensus_8219#1 CTCTCCAGGCGTTCGACGGAGCGGAGTGCCGGAGCCCCGGCACCGGCGAGAGCGGCGGGA 308 ********* ****** *********************** ******** ********* consensus_8219#0 TGTTCCCGTACGGTCTCGGCTGGGCAAACGGTGGCCCTGGGCACCGCCGGAGCGCGTCGG 820 consensus_8219#1 TGCTCCCCTACGGCCTCGCCTGGGCCAACGGCGGCCCTGGGCACCGCCGCAGCGCGTCGG 368 ** **** ***** **** ****** ***** ***************** ********** consensus_8219#0 TCAACGAGCTCTGCCTCGGCGGCGGCAGCAGCGACGGCTTCGGGTGGAAGCCTTGCCTGT 880 consensus_8219#1 TGAACGAGCTCTGCCTCGGCGGCG---------ACGGCTTCGGGTGGAAACCTTGCCTGT 419 * ********************** **************** ********** consensus_8219#0 ACTACGCGCGCGGGTTCTGCAAGAACGGCAGCAGCTGCAGGTTCGTCCACGGCGACGACG 940 consensus_8219#1 ACTACGCGCGCGGGTTCTGCAAGAACGGCAGCACCTGCAGGTTCGTCCATGGCG------ 473 ********************************* *************** **** consensus_8219#0 CCGCCGCTCTGACGGGCGCCGCCATGGACGCGGCCACCGCCGAGCAGCAGCAGTGCCAGG 1000 consensus_8219#1 --GCCTCTCCGACGA-CGCCGCCATGGACGCAACCACCGCCGAACAGCAGCAGTGCCAGG 530 *** *** **** *************** ********** **************** consensus_8219#0 ATTTCCTCCTCCGTTCCAAGAGCCAGCGCCTCGGCCCTGCTGCCTTCCCCTATTCACCCA 1060 consensus_8219#1 ATTTCCTCCTCCGCTCCAAGAGCCAGCGCCTCGGCCCCGCCGCCTTCCCGTTCACCCCCA 590 ************* *********************** ** ******** * * **** consensus_8219#0 CAGGGTCGCTCCCCGGCTCGCCATCCGCCGCCACCAAGTGCCTCAGCCTCTTGCTGCAGC 1120 consensus_8219#1 CAGGCTCTCTCCCTGCCTCGCCATCCGCCACCAGCAAGTGCCTCAGCCTCCTCCTGCAGC 650 **** ** ***** * ************* *** **************** * ******* consensus_8219#0 AGCAGCA------CAACGACAACCAAAGAGCCGCGGCGGCGGCGGCGCTGATGCTCGGCG 1174 consensus_8219#1 AGCAGCAGCAGCACAACGACAACCAAAGAGCCGCCGCGGCCGCG---CTGATGCTCGCCG 707 ******* ********************* ***** *** ********** ** consensus_8219#0 GCAGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGACTTTGCCA 1234 consensus_8219#1 GCGGCGACGAGGCGCACAAGTTCATGGGGCGGCCGCGCCTGGACCGCGTCGATTTCGCCA 767 ** ************************************************* ** **** consensus_8219#0 GCATGATGAACCCCGGATCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCC 1294 consensus_8219#1 GCATGATGAACCCCGGGTCGCGCCAGATTTACCTCACCTTCCCGGCCGACAGCACGTTCC 827 **************** ******************************************* consensus_8219#0 GCGAGGAGGACGTCTCCAACTACTTCAGCATCTACGGTCCGGTGCACGACGTGCGCATCC 1354 consensus_8219#1 GCGAGGAGGACGTCTCCAACTACTTCAGCATCTACGGGCCGGTGCACGACGTGCGCATCC 887 ************************************* ********************** consensus_8219#0 CGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTGTACCCTGAGACGGTGAAGC 1414 consensus_8219#1 CGTACCAGCAGAAGCGCATGTTCGGGTTCGTCACCTTCGTTTACCCGGAGACGGTGAAGC 947 **************************************** ***** ************* consensus_8219#0 TGATCTTGGCCAAGGGCAATCCGCATTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCTT 1474 consensus_8219#1 TGATCTTGGCCAAGGGCAACCCGCACTTCATCTGCGACGCCCGCGTGCTCGTCAAGCCCT 1007 ******************* ***** ******************************** * consensus_8219#0 ACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGAAACATCAAGGTGACTTCTCCGGCT 1534 consensus_8219#1 ACAAGGAGAAGGGCAAGGTCCCCGACAAGTACAGGAAGCAGCAGCAAGGCGATTTCTGCT 1067 ************************************* ** ** * * * * *** consensus_8219#0 GCACGACCCCCACTGGCCTGGACGGCAGAGACCCATTCGATCTGCATCAGCTCGGTGCGA 1594 consensus_8219#1 GCATGTCGCCCACGGGGTTAGACGCCAGGGACCCCTTTGATTTTCACCAGCTCGGTGCAA 1127 *** * * ***** ** * **** *** ***** ** *** * ** *********** * consensus_8219#0 GGATGCTGCAGCACTCCAATAGCACAAACGAGATGATGCTTCGTAGGAAACTGGAGGAGC 1654 consensus_8219#1 GGATGCTGCAGCACTCCAACAGCGCGAACGAGCTAATGCTGCGGCGGAAGCTCGAGGAGC 1187 ******************* *** * ****** * ***** ** **** ** ******* consensus_8219#0 AGCAGCAGGCTGCCGAGCTGCAACAGGCCATCGAACTCCACAGTCGCCGTCTCATGGACC 1714 consensus_8219#1 AGCAACAGGCGGCGGAGCTGCAGCAGGCTATTGATCTCCATAGCCGCCGCCTCATTGGCC 1247 **** ***** ** ******** ***** ** ** ***** ** ***** ***** * ** consensus_8219#0 TCCAGCTGCTCGACCTCAAGAATAGAGCCGCAGCT------GCTGTCACAACAGCAATGG 1768 consensus_8219#1 TCCAGCTGCTCGACCTCAAGTCTTCTGCCGCTGTCCATGCGGCGGAGACGACAACAATGT 1307 ******************** * ***** * ** * ** *** ***** consensus_8219#0 CGATGACAATTCCCACCGCCAATGCCTTCGGTTCCAGTCAGCCTCTTGCCACCACCATGG 1828 consensus_8219#1 CTCTGCCCACTCCGATCACCAATGCCTTCACCTCCGGCCAACCCGGTGCCACCACAATCG 1367 * ** * * *** * * *********** *** * ** ** ********* ** * consensus_8219#0 TCGAGTCACCGCCTGATTCTGGCGAGCAGCTCAAGGGAACAGGTTACTTCACAGAAGAGA 1888 consensus_8219#1 TCGAGTCACCGCCTAGCTCTACTGGGCAACTGATGGCGAGCTGCGGCTCTCCATCGGAGG 1427 ************** *** * *** ** * ** * * ** ** *** consensus_8219#0 GGAAAATGGTCAACGGAGGAGGTGATAAGGAAGAATCTGCTGGTGAGGCGAGCCTGAATG 1948 consensus_8219#1 GGAAAGTTGTCAATGGTGG---TAATAAGGCGGATTCTGCCGGTGAGGTTACCCGCAATG 1484 ***** * ***** ** ** * ****** ** ***** ******* * ** **** consensus_8219#0 CTGATAGCGACCAAAGCTTGGAGCACAATTTGCCGGACAGCCCGTTTGCTTCGCCGACTA 2008 consensus_8219#1 CCGATAGTGACCAAAGTGGTGAGCACAACTTGCCAGACAGCCCGTTTGCTTCCTCTACCA 1544 * ***** ******** ******** ***** ***************** * ** * consensus_8219#0 AGTCCTCTGTCTCAGCTCACCAAAGTTTCACCACCACTGATACCGGTGTCGTCGCGACAA 2068 consensus_8219#1 AGTCGACCGCATT------------CTTTACCGCAACCGCTGCCACTGCCATT--GGTAG 1590 **** * * * ** *** * ** * * ** ** * * * * consensus_8219#0 GTAGCTGCAGTGCATCTCATGTAG--GCATCAGCGCGGGCACTAATGCTGGAGGTGGAAT 2126 consensus_8219#1 CGAGGGAGATTTCACCACCGGTAGTAGCTGCAATATTGGTGGCAGTGCGGTCGGCAGCGC 1650 ** * * ** * * **** ** ** ** * *** * ** * consensus_8219#0 CAACCATCTGCGGCCCTCTACTTTGGATATACCTTCGCCAAGAG---ACTTCTTCTCGGT 2183 consensus_8219#1 CAACCCTCTCCGGCCTCCCACATTGGACATACCTTCGCCAAGGACCTGCTTCTTCCCCAT 1710 ***** *** ***** * ** ***** ************** ******* * * consensus_8219#0 TTCCAGGCTGGCCTCTGATCACGGAGCGATTGGGATGTAAAGTTCTCTGCAATGGA--TG 2241 consensus_8219#1 GCCCAGGCTG---TCCGAGCACGGGGCGATCGGGATGTAAAGTAGTCCACAATGGAAGTG 1767 ******** ** ** ***** ***** ************ ** ******* ** consensus_8219#0 AGTGAATCCCCCAGCCTAA-TCATAGAACACAAGAAGCAAAAGAAAAGCGATAGTGGAAT 2300 consensus_8219#1 GCTGAAACCCTCTCCAGAAATCATAGAATACATGAAGCAAAGAAAGTGTTATCGGAATAT 1827 **** *** * * ** ******** *** ******** ** * ** * ** consensus_8219#0 ATAGGAGAAAAGGAGTGAAGTGTCAGCATAGTGTT----------AGCTCCCTTGTTTAT 2350 consensus_8219#1 AGGGGAAAAAAGGAGTGGAGTGTCAGCGTAGTTTTTAGGATGTTTAGCTCCCCTTTCTTT 1887 * *** ********** ********* **** ** ******* * * * * consensus_8219#0 TTCTTTTTGG-----TTGCCCTTTTTAGTGGGTAGCTCTATTAAA-ACCACAAGT----G 2400 consensus_8219#1 TCGTTTTTAAGCTTCTCTCACCTTTTAGTGGATAGCTCCATTAAACAACACGAGAAGAAG 1947 * ***** * * * ********* ****** ****** * *** ** * consensus_8219#0 AAGATGCCATTAGCCTTTGACTAGGAAAAAA-GCCAGTAGATGCAGACATGCAGTGT--- 2456 consensus_8219#1 AAGATGCCATTAGCCCTTATGGAAGAAAAAGTGGCAGCATATGAAGTATTGTGATATACT 2007 *************** ** * ****** * *** * *** ** ** * * consensus_8219#0 ----TGTGAGATACT----TA-ATATATATAAGCAATCCAGTGTTACCCCC--TTATAAT 2505 consensus_8219#1 ACTATATATAATACTACTCTATATATATATAAATAATTTAGTGGTGCGCCTAATTATACT 2067 * * ***** ** ********** *** **** * * ** ***** * consensus_8219#0 ATTAGATATACTA-------GTAGTACTCAATTACAACTGGCATCAACAACAT-ATATAG 2557 consensus_8219#1 AGAGAATATAGTACTATGTGGCAGTTAGCAGTTATTTTGTTTACTACTGCCATCAGACAA 2127 * ***** ** * *** ** *** * * *** * * * consensus_8219#0 NTGATGTT--TACCCAGTTGTCATCTAAGTTGTAGGCNCTA--ACTGNGAAGTNACT--- 2610 consensus_8219#1 TTGATGTTGTTACCCAGTTCTTCCATGTATAACAACTACTCGTATATTATACTGATTCTG 2187 ******* ********* * * * * ** * * * * * consensus_8219#0 ------------------------ consensus_8219#1 TGGTTAATCCTGGAGGCAAGTGCC 2211 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||