cluster # 8233

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Oryza sativa
cluster # 8233 cluster # 8233 Sequences # 5 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8233#0 length = 442 sequences # 5

consensusID : consensus_8233#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 442
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTAAAACACTGGTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGGACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCTTGCGGGAAACAATTACCACAACACACACAGTAAGTCTGAATTTCATCACATCCATTTTTTTTTTTTTCCTCCCCCCAATTCATTAACATTTTATACATGCATACTCC-CCAAAAAAAAAAAGAAAAACCCAGAAGAGAACATTTTCCATCGCCCAATCATGGGTTTCACCAGCCTGAACTCATAAAGCTCCTTGAAATGCCCTGGCCCTGATAAAATCAATCACACCCTCACCCTGACAGCGTTTGGATGATGGTGTTGTGCCACGGGTCAAACAGGTGCTGCAACAGGTTGTCAAAG]

[+] EMBL CF299068             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTAAAACACTGGTGCTACCATGAAATAGTTTATCCCCCTGGAGTACTGGACATCAAAAATTCACCACTTAACTCACCCCCTCACCCATGCATCCAAATCCATGCTTGCGGGAAACAATTACCACAACCCACACAGTAAGTCTGAATTTCATAACATCCATTTTTTTTTTTTTCCTCCCCCCAATTCATTAACATTTTATACATGCATACTCC CCAAAAAAAAAAAGAAAAACCCAGAAGAGAACATTTTCCATCGCCCAATCATGGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAAATGC                                                                                                  ]
[+] EMBL CF334685             [         TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGCTAAAACACTGGTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGGACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATTTTTTTTTTTTTCCTCCCCCCAATTCATTAACATTTTATACATGCATACTCCACAAAAAAAAAAAAGAAAAACCAAGAAGAGAACTTTTTCCATCGCCCAATCATTGGTTTCACCAGCCTGAACTCATAAAGCTCCTTGAAATGCCCTGGCCCTGATAAAATCAATCACACCCTCACCCTGACAGCGTTTGGATGATGGTGTTGTGCCACGGGTCAAACAGGTGCTGCAACAGGTTGTCAAAG]
[+] EMBL CF300795             [              TTTTTTTTTTTTTTTTTTTTTTTTAACTAAAACACTGGTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGGACATCAAAAATTCACCACTCAACTCACCCCCTTACCCATGCATCCAAATCCATGCTTGCGGGAAACAATTACCACAACACACACAGTAAGTTTGAATTTCATCACATCCATTTTTTTTTTTTTCCTCCCCCCAATTCATTAACATTTTAT                                                                                                                                                                                                            ]
[+] EMBL CF301944             [               TTTTTTTTTTTTTTTTTTTTTTT   TAAAACACTGCTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGGACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCGGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATGCATTTTTTTTTTTTTCCTCCCCCCAATTCATTAACATTTTATACATGCATACTCC CCAAAAAAAAAAAGAAGAACCAGGAAGAGAACATTTTCCATCGCCCAATCATGGGTTTCACCAGCCTGAACTCATAAAGCTCCTTGAAATGCCCTGGCCCTGATAAAATCAATCACACCCTCAACCTGACAACGTTTGGATAATGGTGTTGTGCCACGGGTCAAACAGGGGCTGCAACAGGTTGTCA   ]
[+] EMBL CF302214             [                              TTTTTTTTAACTAAAACACTGGTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGGACATCAAAAATTCACCATTTAACTCACCCCCTCACCCATGCATCCAAATCCATGCTTGCGGGAAACAATTACCACAACACACACAGTAAGTTTGAATTTAATAACATCCATTTTTTTTTTTTTCCTCCCCCCAATTTATTAACATTATATACATGCATACTCC ACAAAAAAAAAAAGAAGAACCCGGAAGAGAACTTTTTCCATCGCCCAATCATGGGTTTCACCAGCCTGAACTCATAAAGCTCCTTGAAATGC                                                                                                  ]




>consensus_8233#0
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTAAAACACTGGTGCTACCA
TGAAATAGTTTATCCCCCTGTAGTACTGGACATCAAAAATTCACCACTCAACTCACCCCC
TCACCCATGCATCCAAATCCATGCTTGCGGGAAACAATTACCACAACACACACAGTAAGT
CTGAATTTCATCACATCCATTTTTTTTTTTTTCCTCCCCCCAATTCATTAACATTTTATA
CATGCATACTCCCCAAAAAAAAAAAGAAAAACCCAGAAGAGAACATTTTCCATCGCCCAA
TCATGGGTTTCACCAGCCTGAACTCATAAAGCTCCTTGAAATGCCCTGGCCCTGATAAAA
TCAATCACACCCTCACCCTGACAGCGTTTGGATGATGGTGTTGTGCCACGGGTCAAACAG
GTGCTGCAACAGGTTGTCAAAG

clustalw multiple alignements is not computed in this case