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Oryza sativa
cluster # 8242 cluster # 8242       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8242#0 length = 1603 sequences # 3  
consensus_8242#1 length = 690 sequences # 1  
consensus_8242#2 length = 659 sequences # 1  

consensusID : consensus_8242#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1603
fasta sequence
                              [CGGAGCTCCTTACTCTACCTCGACTTGCAACCGACCAATGCTCGCCGTTTGTTGGGACATCCATACCCATGCATTCTGGATACGCTCTTCTCTCCTCCGTCTTGCTCGTCCTCCTGGCGCTCTCCATCATCACACTAGTGCCACGCATGCCATCACCGCAGTCGTTCTTCCGATCTCCACCGCCTCGCCTGATCAACAGTAGGGTTCCTCATCCATCCGATGCCAGCGATTGTATTTTCTCCGACGGTAAATGGGTGAGGGACGCCGCGGCCGTGACTGCTTACCGGGAGGACTGCCCGTTTCTTGACCCTGGTTTCCAGTGCATCAGCAACGGCCGGAGCAACTCGTCTTTCCGCTATTGGCGATGGCAGCCTCATGGCTGCAAGC-T-CCCGAAGTTCAATGCAACTGATATGCTGGAGAGGAGCCGGAACGGT-AGAATCGTGTTCGCCGGCGACTCGATCGGCCGTAACCAGT-GGGAGTCCATGGTGTGCATGCTCGCCGCCTCCGTGCCAGCGGGGAAGTCAAGAATATATGAGCAGTCCGGGAAACCCATTAGCAGGCACAAAGGGTACCTCGCCATGGTCTTCGCAGACTACAACCTCTCCGTCGAGTACTACCGCGCCCCAATGCTTGTCATGATCGACCGCTTCCCGGCAAGCAGCGGTGCCGTCAGGGGAGCAGTCCGGCTGGACATGCTGCCTCGGCACGCCAACCGTTGGGCCGGCGCCGACGTGCTCGTGTTCAATACAGGGCATTGGTGGAATGAGCACAAGACTATCAAATCGTAACTTGAGCCGTAGTTAATTAATTAATTATTTTGTTTCTATACATACTATGTTGTTTCATTTATTATAACTGATCCCTTAGTCTCAAACTACTGCCGCATACATGTTTTCAGGGGAAACTATTTCATGGTTGGTGATCGGCTGAACATGAGCATGGACATCAAGGAAGCATTCCGATGGTCCCTGGACACAGTGAAAGATTGGGAGATAAGTAGTACACGGGTTCCAAATAGTTATTTTTTCTTCAGGAGTTATTCTCCTTCTCATTATAGGTCAAAAAATGACAGCAATGGCACGTGGAACACGGGTGGCTCGTGTGCTGACCATCGAGATCCAGTGACCAGTAGTGACCAATTCGACGAGGAGTACTCTTGGATCAACTCCATGATCTCGAACGCCATCGATGGCATCAGAAGCCACGGTCGAAGGAAAGCCCATTTCTTGAACATAACGTACATGACCGAACTGAGGAGGGATGGCCACCCGTCGCGGAACCGGGAGCCTGGGACGCCGCAGGACGCGCCCGAGGACTGCAGCCACTGGTGTCTGCCGGGCGTGCCTGACACATGGAATGAGGTCCTGTATGCACACCTTATGTCAATGGGATATGATATCAGGATACACTAGTACAAAACCCTCGCAGGGACCTGCTGTATATGTGGCTATGTGACTTTTTCCACCTCCACATGATAAAAAAAATATAAAACTAGCATATTTAAACACTATAGTTGTTGGCTCTTAAAAAAACTGGTAGTAATATTGGGTATAATTTTATGCTTTCTAAATGTTTCTTGAAACTAAATGATTTGAAATGATGA]

[+] EMBL AK071067             [CGGAGCTCCTTACTCTACCTCGACTTGCAACCGACCAATGCTCGCCGTTTGTTGGGACATCCATACCCATGCATTCTGGATACGCTCTTCTCTCCTCCGTCTTGCTCGTCCTCCTGGCGCTCTCCATCATCACACTAGTGCCACGCATGCCATCACCGCAGTCGTTCTTCCGATCTCCACCGCCTCGCCTGATCAACAGTAGGGTTCCTCATCCATCCGATGCCAGCGATTGTATTTTCTCCGACGGTAAATGGGTGAGGGACGCCGCGGCCGTGACTGCTTACCGGGAGGACTGCCCGTTTCTTGACCCTGGTTTCCAGTGCATCAGCAACGGCCGGAGCAACTCGTCTTTCCGCTATTGGCGATGGCAGCCTCATGGCTGCCAGC T CCCGAAGTTCAATGCAACTGATATGCTGGAGAGGAGCCGGAACGGT AGAATCGTGTTCGCCGGCGACTCGATCGGCCGTAACCAGT GGGAGTCCATGGTGTGCATGCTCGCCGCCTCCGTGCCAGCGGGGAAGTCAAGAATATATGAGCAGTCCGGGAAACCCATTAGCAGGCACAAAGGGTACCTCGCCATGGTCTTCGCAGACTACAACCTCTCCGTCGAGTACTACCGCGCCCCAATGCTTGTCATGATCGACCGCTTCCCGGCAAGCAGCGGTGCCGTCAGGGGAGCAGTCCGGCTGGACATGCTGCCTCGGCACGCCAACCGTTGGGCCGGCGCCGACGTGCTCGTGTTCAATACAGGGCATTGGTGGAATGAGCACAAGACTATCAAATCGTAACTTGAGCCGTAGTTAATTAATTAATTATTTTGTTTCTATACATACTATGTTGTTTCATTTATTATAACTGATCCCTTAGTCTCAAACTACTGCCGCATACATGTTTTCAGGGGAAACTATTTCATGGTTGGTGATCGGCTGAACATGAGCATGGACATCAAGGAAGCATTCCGATGGTCCCTGGACACAGTGAAAGATTGGGAGATAAGTAGTACACGGGTTCCAAATAGTTATTTTTTCTTCAGGAGTTATTCTCCTTCTCATTATAGGTCAAAAAATGACAGCAATGGCACGTGGAACACGGGTGGCTCGTGTGCTGACCATCGAGATCCAGTGACCAGTAGTGACCAATTCGACGAGGAGTACTCTTGGATCAACTCCATGATCTCGAACGCCATCGATGGCATCAGAAGCCACGGTCGAAGGAAAGCCCATTTCTTGAACATAACGTACATGACCGAACTGAGGAGGGATGGCCACCCGTCGCGGAACCGGGAGCCTGGGACGCCGCAGGACGCGCCCGAGGACTGCAGCCACTGGTGTCTGCCGGGCGTGCCTGACACATGGAATGAGGTCCTGTATGCACACCTTATGTCAATGGGATATGATATCAGGATACACTAGTACAAAACCCTCGCAGGGACCTGCTGTATATGTGGCTATGTGACTTTTTCCACCTCCACATGATAAAAAAAATATAAAACTAGCATATTTAAACACTATAGTTGTTGGCTCTTAAAAAAACTGGTAGTAATATTGGGTATAATTTTATGCTTTCTAAATGTTTCTTGAAACTAAATGATTTGAAATGATGA]
[+] EMBL C72470               [                              CCGACCAATGGTCGCCGTTTGTTGGGACATCCATACCCATGCATTCTGGATACGCTCTTCTCTCCTCCGTCTTGCTCGTCCTCCTGGCGCTCTCCATCATCACACTAGTGCCACGCATGCCATCACCGCAGTCGTTCTTCCGATCTCCACCGCCTCGCCTGATCAACAGTAGGGTTCCTCATCCATCCGATGCCAGCGATTGTATTTTCTCCGACGGTAAATGGGTGAGGGACGCCGCGGCCGTGACTGCTTACCGGGAGGACTGCCCGTTTCTTGACCCTGGTTTCCAGTGCATCAGCAACGGCCGGAGCAACTCGTCTTTCCGCTACTGGCGATGGCAG CTCATGGNTGCAAGC TCCCCGAAGTTCAATGC ANTGATATGCTGGANAAGAG CGGAA GGA AGAATCGTGTT TNCGGGGAATTGATng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C71891               [                                                                                                                                    CACTAGTGCCACGCATGCNATCACCGCAGTCGTTCTTCCGATCTCCACCGCCTCGCCTGATCAACAGTAGGGTTCCTNATCCATCCNATGCCAGCAATTGTNTTTNNTCCGACGGTAAATGGGTGAGGGACGCCGCGGCCGTNACTGCTTACCGGGAGGACTGCCCGTTTTTTGACCCTGGTTTCCAGTGCATCAGCAACGGCCGGAGCAACTNGTNTTTCCGCTATTGGCGATGGCAGCCTCATGGCTG NAGCTT CCCGANGTTCAATGCAACTAATATGCTGGAGAGGAGCCGGAACGGTAAGAATCGTGTTCGCCGGCGACTCGATCGGCCGTAACCAGTGGGGAGTCCATGGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]


>consensus_8242#0 CGGAGCTCCTTACTCTACCTCGACTTGCAACCGACCAATGCTCGCCGTTTGTTGGGACAT CCATACCCATGCATTCTGGATACGCTCTTCTCTCCTCCGTCTTGCTCGTCCTCCTGGCGC TCTCCATCATCACACTAGTGCCACGCATGCCATCACCGCAGTCGTTCTTCCGATCTCCAC CGCCTCGCCTGATCAACAGTAGGGTTCCTCATCCATCCGATGCCAGCGATTGTATTTTCT CCGACGGTAAATGGGTGAGGGACGCCGCGGCCGTGACTGCTTACCGGGAGGACTGCCCGT TTCTTGACCCTGGTTTCCAGTGCATCAGCAACGGCCGGAGCAACTCGTCTTTCCGCTATT GGCGATGGCAGCCTCATGGCTGCAAGCTCCCGAAGTTCAATGCAACTGATATGCTGGAGA GGAGCCGGAACGGTAGAATCGTGTTCGCCGGCGACTCGATCGGCCGTAACCAGTGGGAGT CCATGGTGTGCATGCTCGCCGCCTCCGTGCCAGCGGGGAAGTCAAGAATATATGAGCAGT CCGGGAAACCCATTAGCAGGCACAAAGGGTACCTCGCCATGGTCTTCGCAGACTACAACC TCTCCGTCGAGTACTACCGCGCCCCAATGCTTGTCATGATCGACCGCTTCCCGGCAAGCA GCGGTGCCGTCAGGGGAGCAGTCCGGCTGGACATGCTGCCTCGGCACGCCAACCGTTGGG CCGGCGCCGACGTGCTCGTGTTCAATACAGGGCATTGGTGGAATGAGCACAAGACTATCA AATCGTAACTTGAGCCGTAGTTAATTAATTAATTATTTTGTTTCTATACATACTATGTTG TTTCATTTATTATAACTGATCCCTTAGTCTCAAACTACTGCCGCATACATGTTTTCAGGG GAAACTATTTCATGGTTGGTGATCGGCTGAACATGAGCATGGACATCAAGGAAGCATTCC GATGGTCCCTGGACACAGTGAAAGATTGGGAGATAAGTAGTACACGGGTTCCAAATAGTT ATTTTTTCTTCAGGAGTTATTCTCCTTCTCATTATAGGTCAAAAAATGACAGCAATGGCA CGTGGAACACGGGTGGCTCGTGTGCTGACCATCGAGATCCAGTGACCAGTAGTGACCAAT TCGACGAGGAGTACTCTTGGATCAACTCCATGATCTCGAACGCCATCGATGGCATCAGAA GCCACGGTCGAAGGAAAGCCCATTTCTTGAACATAACGTACATGACCGAACTGAGGAGGG ATGGCCACCCGTCGCGGAACCGGGAGCCTGGGACGCCGCAGGACGCGCCCGAGGACTGCA GCCACTGGTGTCTGCCGGGCGTGCCTGACACATGGAATGAGGTCCTGTATGCACACCTTA TGTCAATGGGATATGATATCAGGATACACTAGTACAAAACCCTCGCAGGGACCTGCTGTA TATGTGGCTATGTGACTTTTTCCACCTCCACATGATAAAAAAAATATAAAACTAGCATAT TTAAACACTATAGTTGTTGGCTCTTAAAAAAACTGGTAGTAATATTGGGTATAATTTTAT GCTTTCTAAATGTTTCTTGAAACTAAATGATTTGAAATGATGA



consensusID : consensus_8242#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 690
fasta sequence
                              [TTACCGGGAAGGACTGCCCGTTTCTTGACCNTGGTTTCCCAGTGCATCAGCAACGGNCCGGAGCAACTCATCTTTCCGGCTACTGNCGATGGCAGCTTCATGGTTGCCAGCTCCCGAAGTTCAATGCAACTGATATGCTGGAGAGGAGCCGGAACGGCAAGAATCGTGTTCGCCGGCGACTCGATCGGCCGTAACCAGTGGGAGTCCATGGTGTGCATGCTCGCCGCCTCCGTGCCAGCGGGGAAGTCAAGAATATATGAGCAGTCCGGGAAACCCATTAGCAGGCACAAAGGGTACCTCGCCATGGTCTTCGCAGACTACAACCTCTCCGTCGAGTACTACCACGCCCCAATGCTTGTCATGATCGACCGCTTCCCGGCAAGCAGCGGTGCCGTCAGGGGAGCGGTCCGGCTGGACATGCTGCCTCGGCACGCCAACCGTTGGGCCGGCGCCGACGTGCTCGTGTTCAATACAGGGCATTGGTGGAATGAGCACAAGACTATCAAATCGTAATGCCAGGGGCTGCTTCAAGAAACGGGTGATGTGGGTTCCAATCATTCTTGGTTTGGTTCCTCGGCACCAAGCCAATCCCATTCCTTTCCGCTGGTGACCGCCTTCTTGTTGCCTACCTTTTTAACCCCTGTTGTAACCCCAAGTCCAAGTACAAGGCATACGTGCTCCTTTAAAAAA]

[+] EMBL AU165753             [TTACCGGGAAGGACTGCCCGTTTCTTGACCNTGGTTTCCCAGTGCATCAGCAACGGNCCGGAGCAACTCATCTTTCCGGCTACTGNCGATGGCAGCTTCATGGTTGCCAGCTCCCGAAGTTCAATGCAACTGATATGCTGGAGAGGAGCCGGAACGGCAAGAATCGTGTTCGCCGGCGACTCGATCGGCCGTAACCAGTGGGAGTCCATGGTGTGCATGCTCGCCGCCTCCGTGCCAGCGGGGAAGTCAAGAATATATGAGCAGTCCGGGAAACCCATTAGCAGGCACAAAGGGTACCTCGCCATGGTCTTCGCAGACTACAACCTCTCCGTCGAGTACTACCACGCCCCAATGCTTGTCATGATCGACCGCTTCCCGGCAAGCAGCGGTGCCGTCAGGGGAGCGGTCCGGCTGGACATGCTGCCTCGGCACGCCAACCGTTGGGCCGGCGCCGACGTGCTCGTGTTCAATACAGGGCATTGGTGGAATGAGCACAAGACTATCAAATCGTAATGCCAGGGGCTGCTTCAAGAAACGGGTGATGTGGGTTCCAATCATTCTTGGTTTGGTTCCTCGGCACCAAGCCAATCCCATTCCTTTCCGCTGGTGACCGCCTTCTTGTTGCCTACCTTTTTAACCCCTGTTGTAACCCCAAGTCCAAGTACAAGGCATACGTGCTCCTTTAAAAAA]


>consensus_8242#1 TTACCGGGAAGGACTGCCCGTTTCTTGACCNTGGTTTCCCAGTGCATCAGCAACGGNCCG GAGCAACTCATCTTTCCGGCTACTGNCGATGGCAGCTTCATGGTTGCCAGCTCCCGAAGT TCAATGCAACTGATATGCTGGAGAGGAGCCGGAACGGCAAGAATCGTGTTCGCCGGCGAC TCGATCGGCCGTAACCAGTGGGAGTCCATGGTGTGCATGCTCGCCGCCTCCGTGCCAGCG GGGAAGTCAAGAATATATGAGCAGTCCGGGAAACCCATTAGCAGGCACAAAGGGTACCTC GCCATGGTCTTCGCAGACTACAACCTCTCCGTCGAGTACTACCACGCCCCAATGCTTGTC ATGATCGACCGCTTCCCGGCAAGCAGCGGTGCCGTCAGGGGAGCGGTCCGGCTGGACATG CTGCCTCGGCACGCCAACCGTTGGGCCGGCGCCGACGTGCTCGTGTTCAATACAGGGCAT TGGTGGAATGAGCACAAGACTATCAAATCGTAATGCCAGGGGCTGCTTCAAGAAACGGGT GATGTGGGTTCCAATCATTCTTGGTTTGGTTCCTCGGCACCAAGCCAATCCCATTCCTTT CCGCTGGTGACCGCCTTCTTGTTGCCTACCTTTTTAACCCCTGTTGTAACCCCAAGTCCA AGTACAAGGCATACGTGCTCCTTTAAAAAA



consensusID : consensus_8242#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 659
fasta sequence
                              [AACACCTCTCCGTCGAGTACTACCGCGCCCCCAATGCTTGTCATGATCGACCGCTTCCCGGCAANCACCGTTNCCGTCAGGGGANCAGTCCGGCTGGNCATGCTGCCTCGGCACGCCAACCGTTGGCCCGGCGCCGACGTGCTCGTGTTCAATACAGGGCATTGGTGGAATGAGCACAAGACTATCAAATCGGGAAACTATTTCATGGTTGGTGATCGGCTGAACATGAGCATGGACATCAAGGAAGCATTCCGATGGTCCCTGGACACAGTGAAAGATTGGGAGATAAGTAGTACACGGGTTCCAAATAGTTATTTTTTCTTCAGGAGTTATTCTCCTTCTCATTATAGGATTAGACTTAGTTTAATTTGAGTGATGCGGTTTTCGACTGCTTCTTATAGGATTTGAACTTAATGGGGGTAAACCCCTAGTCGGTGTGCTTGAGGATTGGGTAGTCAAGCTTCCGTTGTTCTCTTATATATTTATTTGGCCGGTCGGCCTATGTAACTATTAAGTTGATGTAAGTCTCTTAGAAATTTCGTCTTAAATGTGTTTGCTATGTATGTCCATGCTTAAGATGAAAGTGTGAATCTAGTGCACATCTTGGGAATTAGATTCACATGAGTTAAGAATATTTGAGATGTTGTAAAAAAAAAAAA]

[+] EMBL AU078113             [AACACCTCTCCGTCGAGTACTACCGCGCCCCCAATGCTTGTCATGATCGACCGCTTCCCGGCAANCACCGTTNCCGTCAGGGGANCAGTCCGGCTGGNCATGCTGCCTCGGCACGCCAACCGTTGGCCCGGCGCCGACGTGCTCGTGTTCAATACAGGGCATTGGTGGAATGAGCACAAGACTATCAAATCGGGAAACTATTTCATGGTTGGTGATCGGCTGAACATGAGCATGGACATCAAGGAAGCATTCCGATGGTCCCTGGACACAGTGAAAGATTGGGAGATAAGTAGTACACGGGTTCCAAATAGTTATTTTTTCTTCAGGAGTTATTCTCCTTCTCATTATAGGATTAGACTTAGTTTAATTTGAGTGATGCGGTTTTCGACTGCTTCTTATAGGATTTGAACTTAATGGGGGTAAACCCCTAGTCGGTGTGCTTGAGGATTGGGTAGTCAAGCTTCCGTTGTTCTCTTATATATTTATTTGGCCGGTCGGCCTATGTAACTATTAAGTTGATGTAAGTCTCTTAGAAATTTCGTCTTAAATGTGTTTGCTATGTATGTCCATGCTTAAGATGAAAGTGTGAATCTAGTGCACATCTTGGGAATTAGATTCACATGAGTTAAGAATATTTGAGATGTTGTAAAAAAAAAAAA]


>consensus_8242#2 AACACCTCTCCGTCGAGTACTACCGCGCCCCCAATGCTTGTCATGATCGACCGCTTCCCG GCAANCACCGTTNCCGTCAGGGGANCAGTCCGGCTGGNCATGCTGCCTCGGCACGCCAAC CGTTGGCCCGGCGCCGACGTGCTCGTGTTCAATACAGGGCATTGGTGGAATGAGCACAAG ACTATCAAATCGGGAAACTATTTCATGGTTGGTGATCGGCTGAACATGAGCATGGACATC AAGGAAGCATTCCGATGGTCCCTGGACACAGTGAAAGATTGGGAGATAAGTAGTACACGG GTTCCAAATAGTTATTTTTTCTTCAGGAGTTATTCTCCTTCTCATTATAGGATTAGACTT AGTTTAATTTGAGTGATGCGGTTTTCGACTGCTTCTTATAGGATTTGAACTTAATGGGGG TAAACCCCTAGTCGGTGTGCTTGAGGATTGGGTAGTCAAGCTTCCGTTGTTCTCTTATAT ATTTATTTGGCCGGTCGGCCTATGTAACTATTAAGTTGATGTAAGTCTCTTAGAAATTTC GTCTTAAATGTGTTTGCTATGTATGTCCATGCTTAAGATGAAAGTGTGAATCTAGTGCAC ATCTTGGGAATTAGATTCACATGAGTTAAGAATATTTGAGATGTTGTAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8242#0      CGGAGCTCCTTACTCTACCTCGACTTGCAACCGACCAATGCTCGCCGTTTGTTGGGACAT 60
consensus_8242#1      ------------------------------------------------------------
consensus_8242#2      ------------------------------------------------------------
                                                                                  

consensus_8242#0      CCATACCCATGCATTCTGGATACGCTCTTCTCTCCTCCGTCTTGCTCGTCCTCCTGGCGC 120
consensus_8242#1      ------------------------------------------------------------
consensus_8242#2      ------------------------------------------------------------
                                                                                  

consensus_8242#0      TCTCCATCATCACACTAGTGCCACGCATGCCATCACCGCAGTCGTTCTTCCGATCTCCAC 180
consensus_8242#1      ------------------------------------------------------------
consensus_8242#2      ------------------------------------------------------------
                                                                                  

consensus_8242#0      CGCCTCGCCTGATCAACAGTAGGGTTCCTCATCCATCCGATGCCAGCGATTGTATTTTCT 240
consensus_8242#1      ------------------------------------------------------------
consensus_8242#2      ------------------------------------------------------------
                                                                                  

consensus_8242#0      CCGACGGTAAATGGGTGAGGGACGCCGCGGCCGTGACTGCTTACCGGGA-GGACTGCCCG 299
consensus_8242#1      ----------------------------------------TTACCGGGAAGGACTGCCCG 20
consensus_8242#2      ------------------------------------------------AACACCTCTCCG 12
                                                                      *    **  ***

consensus_8242#0      TTTCTTGACCCTGGTTTCC-AGTGCATCAGCAACGGCC-GGAGCAACTCGTCTTTC-CG- 355
consensus_8242#1      TTTCTTGACCNTGGTTTCCCAGTGCATCAGCAACGGNCCGGAGCAACTCATCTTTC-CGG 79
consensus_8242#2      TCGAGTACTACCGCGCCCCCAATGCTT--GTCATGATCGACCGCTTCCCGGCAANCACCG 70
                      *    *      *    ** * *** *  *  * *  *    **  * *  *   * *  

consensus_8242#0      CTATTGGCGATGGCAGCCTCATGGCTGCAA-GCTCCCGAAGTTCAATG-CAACTGATATG 413
consensus_8242#1      CTACTGNCGATGGCAGCTTCATGGTTGCCA-GCTCCCGAAGTTCAATG-CAACTGATATG 137
consensus_8242#2      TTNCCGTCAGGGGANCAGTCCGGCTGGNCATGCTGCCTCGGCACGCCAACCGTTGGCCCG 130
                       *   * *   **     **  *   *  * *** **   *  *     *   **    *

consensus_8242#0      CTGGAGAGGAGCCGGAACGGTA-GAATCGTGTTCGCCGGCGACTCGATCGGCCGTAACCA 472
consensus_8242#1      CTGGAGAGGAGCCGGAACGGCAAGAATCGTGTTCGCCGGCGACTCGATCGGCCGTAACCA 197
consensus_8242#2      GCGCCGACGTGCTCGTGTTCAATACAGGGCATTGGTGGAATGAGCACAAGACTATCAA-A 189
                        *  ** * **  *      *   *  *  ** *  *      *    * *  * *  *

consensus_8242#0      GTGGGAGTCCATGGTGTGCATGCTCGCCGCCTCCGTGCCAGCGGGGAAGTCAAGAATATA 532
consensus_8242#1      GTGGGAGTCCATGGTGTGCATGCTCGCCGCCTCCGTGCCAGCGGGGAAGTCAAGAATATA 257
consensus_8242#2      TCGGGAAACTATTTCATGGTTGGTGATCGGCTGAACATGAGCATGGACATCAAGGAAGCA 249
                        ****  * **    **  ** *   ** **       ***  ***  ***** *   *

consensus_8242#0      TG--AGCAGTCCGGGAAACCCATTAGCAGGCACAAAGGGTACCTCGCCATGGTCTTCGCA 590
consensus_8242#1      TG--AGCAGTCCGGGAAACCCATTAGCAGGCACAAAGGGTACCTCGCCATGGTCTTCGCA 315
consensus_8242#2      TTCCGATGGTCCCTGGA-CACAGTGAAAGATTGGGAGATAAGTAGTACACGGGTTC--CA 306
                      *       ****  * * * ** *   **      **   *      ** **  *   **

consensus_8242#0      GACTACAACCTCTCCGTCGAGTACTACCGCGCCCCAATGCTTGTCATGATCGACCGCTTC 650
consensus_8242#1      GACTACAACCTCTCCGTCGAGTACTACCACGCCCCAATGCTTGTCATGATCGACCGCTTC 375
consensus_8242#2      AATAGTTATTTTTTCTTCAGGAGTTATT---CTCCTTCTCATTATAGGATTAGACTTAGT 363
                       *     *  * * * **  *   **     * **    * *   * ***    *     

consensus_8242#0      CCGGCAAGCAGCGGTGCCGTCAGGGGAGCAGTCCGGCTGGACATGCTGCCTCGGCACGCC 710
consensus_8242#1      CCGGCAAGCAGCGGTGCCGTCAGGGGAGCGGTCCGGCTGGACATGCTGCCTCGGCACGCC 435
consensus_8242#2      TTAATTTG-AGTGATGCGGTTTTCGA-------CTGCTTCTTATAGGATTTGAACTTAAT 415
                             * ** * *** **    *        * ***    **      *   *     

consensus_8242#0      AACCGTTGGGCCGGCGCCGACGTGCTCGTGTTCAATACAGGGCATTGGTGGAATGAGCAC 770
consensus_8242#1      AACCGTTGGGCCGGCGCCGACGTGCTCGTGTTCAATACAGGGCATTGGTGGAATGAGCAC 495
consensus_8242#2      GGGGGTAAACCCCTAGTCGGTGTGCTTG-----AGGATTGGG---TAGTCAAGCTTCCGT 467
                          **    **   * **  ***** *     *  *  ***   * **  *     *  

consensus_8242#0      AAGACTATCAAATCGTAACTTGAGCCGTAGTT--AATTAATTAATTATTTTGTTTCTATA 828
consensus_8242#1      AAGACTATCAAATCGTAATGCCAGGGGCTGCTTCAAGAAACGGGTGATGTGGGTTCCAAT 555
consensus_8242#2      TGTTCTCTTATATATTTATTTGGCCGGTCGGCCTATGTAACTATTAA-GTTGATGTAAGT 526
                          ** * * **  * *        *  *    *   **    * *  * * *   *  

consensus_8242#0      CATACTATGTTGTTTCATTTATTATAACTGATCCCTTAGTCTCAAACTACTGCCGCATAC 888
consensus_8242#1      CATTCTTGGTT-----------------TGGTTCCTCGGCACCAAGCCAATCCC----AT 594
consensus_8242#2      C--TCTTAGAA------------------ATTTCGTCTTAAATGTGTTTGCTATGTATGT 566
                      *   **  *                      * * *                        

consensus_8242#0      ATGTTTTCAGGGGAAACTATTTCATGGTTGGTGATCGGCTGAACATGAGCATGGACATCA 948
consensus_8242#1      TCCTTTCCGCTGGTGACCGCCTTCTTGTTGCCTACCTTTTTAACCCCTGTTGTAACCCCA 654
consensus_8242#2      CCATGCTTAA-GATGAAAGTGTGAATCTAGTGCACATCTTGGGAATTAGAT-TCACATGA 624
                         *       *   *     *     * *   *     *        *     **   *

consensus_8242#0      AGGAAGCATTCCGATGGTCCCTGGACACAGTGAAAGATTGGGAGATAAGTAGTACACGGG 1008
consensus_8242#1      AGTCCAAGTACAAGGCATACGTGCTC-CTTTAAAAAA----------------------- 690
consensus_8242#2      GTTAAGAATATTTGAGATGT-TGTAAAAAAAAAAAA------------------------ 659
                              *        *   **         ***                         

consensus_8242#0      TTCCAAATAGTTATTTTTTCTTCAGGAGTTATTCTCCTTCTCATTATAGGTCAAAAAATG 1068
consensus_8242#1      ------------------------------------------------------------
consensus_8242#2      ------------------------------------------------------------
                                                                                  

consensus_8242#0      ACAGCAATGGCACGTGGAACACGGGTGGCTCGTGTGCTGACCATCGAGATCCAGTGACCA 1128
consensus_8242#1      ------------------------------------------------------------
consensus_8242#2      ------------------------------------------------------------
                                                                                  

consensus_8242#0      GTAGTGACCAATTCGACGAGGAGTACTCTTGGATCAACTCCATGATCTCGAACGCCATCG 1188
consensus_8242#1      ------------------------------------------------------------
consensus_8242#2      ------------------------------------------------------------
                                                                                  

consensus_8242#0      ATGGCATCAGAAGCCACGGTCGAAGGAAAGCCCATTTCTTGAACATAACGTACATGACCG 1248
consensus_8242#1      ------------------------------------------------------------
consensus_8242#2      ------------------------------------------------------------
                                                                                  

consensus_8242#0      AACTGAGGAGGGATGGCCACCCGTCGCGGAACCGGGAGCCTGGGACGCCGCAGGACGCGC 1308
consensus_8242#1      ------------------------------------------------------------
consensus_8242#2      ------------------------------------------------------------
                                                                                  

consensus_8242#0      CCGAGGACTGCAGCCACTGGTGTCTGCCGGGCGTGCCTGACACATGGAATGAGGTCCTGT 1368
consensus_8242#1      ------------------------------------------------------------
consensus_8242#2      ------------------------------------------------------------
                                                                                  

consensus_8242#0      ATGCACACCTTATGTCAATGGGATATGATATCAGGATACACTAGTACAAAACCCTCGCAG 1428
consensus_8242#1      ------------------------------------------------------------
consensus_8242#2      ------------------------------------------------------------
                                                                                  

consensus_8242#0      GGACCTGCTGTATATGTGGCTATGTGACTTTTTCCACCTCCACATGATAAAAAAAATATA 1488
consensus_8242#1      ------------------------------------------------------------
consensus_8242#2      ------------------------------------------------------------
                                                                                  

consensus_8242#0      AAACTAGCATATTTAAACACTATAGTTGTTGGCTCTTAAAAAAACTGGTAGTAATATTGG 1548
consensus_8242#1      ------------------------------------------------------------
consensus_8242#2      ------------------------------------------------------------
                                                                                  

consensus_8242#0      GTATAATTTTATGCTTTCTAAATGTTTCTTGAAACTAAATGATTTGAAATGATGA 1603
consensus_8242#1      -------------------------------------------------------
consensus_8242#2      -------------------------------------------------------
                                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)