cluster # 8251

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Oryza sativa
cluster # 8251 cluster # 8251 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8251#0 length = 2143 sequences # 5
consensusID : consensus_8251#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2143
fasta sequence
                              [CCCTACGACACTGAGGAGGCTTGCACAGAATAGAGAGGCACCAAGGAAAAGTAGCCTTAGTAAGAAGGCTTACATTCAACAGTTGAAGTCAAGGAGGATTAGGCTAAGCCAGCTTGCACAGCAAGTTCACGTGGCAAGAGTACAGATGCCTTTTGATCTGTTCTGTGATATATCTCCCACGAGTAAGAATTGGAAGATCTGTGCAACAATAGCAAGGAATGAATCTTGTCAGGTTGGAACGAGGATCAGACAATATTCCTCGAGAGATTGCGAGTGTTGTGTCCCAAAAATTCACTTTCTGCGTTTCTGTCACCGAAAGGAGCTTCATGCAGAGGAACATCGCGTTTCAAGTCAATAGCATTGAAACTTCTTTGGCAGACAAGGCACTATTCCACAGGTTAGGGATCAGACATTGCAACTCACATCATCTGTCATTTCACCTTTTGCTGGTGGTTCAAGTATATGTAGAGAAAGTGAGTGTCCTGATCATACTTCGACACCGCCTGCTTCTTCTAATACCCCTGTGGGTGATATGGAGAAAGCCCATGCTGATAGCAGGAAACGATGCCCCATTATGCGCCTTCCTCTAGGTGCATCGAAGAAGCTAACTTTTGAGGTGGGCGCGTCCGAAGGAAAGGATATAGATACAGCTGTTGTTTCAGAAAGGGTGCAGAATTAGCCTCCATTGATGGGAAAAAAAAGGGCACCGTCAATCCTGCTGGTGCTCAGAGGACAAGAGCTTCCTATATGAAATAGAAGCTACAATTTCGCGCCATCGGTCTTCACTGGCAATGGACGCGTTTGAATCAAGTCCTTAGTTATGTGCTCTGCTCTTGTTCTGTGATTCTTGTTCACGCGAAGTGCAGGTCACTGACTTTACGGTATTGGAGTTGGAGTAGAAGATCAGCTGCTCCATCATCGACGATGGCCTGATCCACAAAGATGAATTTTGGTGCTGATACTTCCAGGGAGATACAGCCATGAATCCACCTAGGTTTTTCACGGTTAGACTAACCACAGCAAACCAGCGCTATGTGACCAGCTGCAATCGCACAAGGATATCAGCTGGAGGATGGCCAGAGACTCAAATTAGTAACAACCCATAACCTAATGGTCTACATTGAACTAAAGAGAGCATCTGGCAAAATATACATCACTACAGGATGGCCCCAGTTCATAGAAGCCACTGGTTTGCAGCTTAAAGAATATGTGGTTTTCAAAGTCTTATCACGCTCCAAGATGCATGTCATCATATAAGCCAAGAGTGGTTATCTTAGATGTCCAGTGCCAAGC-AAACCAAGCAACTCACAGCTAAAGAAAAACGCGCTTCAGAAACCAAAACCACCAGAAAAAAAGAACCAAGACTAAGCCACACATGCAACACCCCATGCAACAGAAATTAAAAGCCGATATAGGGTCAGCTTGTACAGGCAACACCAAACGCACTATCAATGAAATGTGCTTCTGCACCGGGGAGGGACATCAATCTATCAACTGAACTCAAAGACTACTTCAAAGATATTGCGCAATTTCTGCACCCCTCAAACGAATTCTATGTCACAACCATAAATCCAACTTTCATGAAGCAGGATAAGGTGCACTTTTCAAAGCAATTCTCTATGACATACATTGCACTAATCGTGCGGAAGAAGACATCGCAGATCGAAGTACGGATTCCAGGGCACTCCTCAACCACCATGGTTCTTCACCACTCCACAGAAAAGCGCTTTAACCTGAAATCAGGATGGACCCATTTTCCAACAAGCAACGGCATACAAGTTGGAACAATCTGCATCTTTCACTTCCACCAGACTAATCAGCTGCAAGCAACAATAGATGTGCTGTGAGCAAGATGCTCATGCAACACAAGCTGTTATCCTTTTAATATCGTAGGCTATATTTTCACTCTGCTACTTCTATAGCTGTTAGTATCATTCTTTGTATGCTTTGCATGGGTACTCAATTTCCATGTAAAAATCACGCCCAAACTATTATGCCAGCGTGCTGTTACAGAACAGGAGCTGACGGTACCTTACGTACTGTCTTTGGTTGTTTTGCTTGTACTTATATGCAACCAAAGACAATTCACCCTGTCCTGTATGAACAACCATGCTATCATATTCTGTTTCACCTTTAAAAAAAA]

[+] EMBL CB629600             [CCCTACGACACTGAGGAGGCTTGCACAGAATAGAGAGGCACCAAGGAAAAGTAGCCTTAGTAAGAAGGCTTACATTCAACAGTTGAAGTCAAGGAGGATTAGGCTAAGCCAGCTTGCACAGCAAGTTCACGTGGCAAGAGTACAGATGCCTTTTGATCTGTTCTGTGATATATCTCCCACGAGTAAGAATTGGAAGATCTGTGCAACAATAGCAAGGAATGAATCTTGTCAGGTTGGAACGAGGATCAGACAATATTCCTCGAGAGATTGCGAGTGTTGTGTCCCAAAAATTCACTTTCTGCGTTTCTGTCACCGAAAGGAGCTTCATGCAGAGGAACATCGCGTTTCAAGTCAATAGCATTGAAACTTCTTTGGCAGACAAGGCACTATTCCACAGGTTAGGGATCAGACATTGCAACTCACATCATCTGTCATTTCACCTTTTGCTGGTGGTTCAAGTATATGTAGAGAAAGTGAGTGTCCTGATCATACTTCGACACCGCCTGCTTCTTCTAATACCCCTGTGGGTGATATGGAGAAAGCCCATGCTGATAGCAGGAAACGATGCCCCATTATGCGCCTTCCTCTAGGTGCATCGAAGAAGCTAACTTTTGAGGTGGGCGCGTCCGAAGGAAAGGATATAGATACAGCTGTTGTTTCAGAAAGGGTGCAGAATTAGCCTCCATTGATGGGAAAAAAAAGGGCACCGTCAATCCTGCTGGTGCTCAGAGGACAAGAGCTTCCTATATGAAATAGAAGCTACAATTTCGCGCCATCGGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK103347             [                                                                                                                                                                                                                                                                                   GTTGTGTCCCAAAAATTCACTTTCTGCGTTTCTGTCACCGAAAGGAGCTTGATGCAGAGGAACATCGCGTTTCAAGTCAATAGCATTGAAACTTCTTTGGCAGACAAGGCACTATTCCACAGGTTAGGGATCAGACATTGCAACTCACATCATCTGTCATTTCACCTTTTGCTGGTGGTTCAAGTATATGTAGAGAAAGTGAGTGTCCTGATCATACTTCGACACCGCCTGCTTCTTCTAATACCCCTGTGGGTGATATGGAGAAAGCCCATGCTGATAGCAGGAAACGACGCCCCATTATGCGCCTTCCTCTAGGTGCATCGAAGAAGCTAACTTTTGAGGTGGGCGCGTCCGAAGGAAAGGATATAGATACAGCTGTTGTTTCAGAAAGGGTGCAGAATTAGCCTCCATTGATGGGAAAAAAAAGGGCACCGTCAATCCTGCTGGTGCTCAGAGGACAAGAGCTTCCTATATGAAATAGAAGCTACAATTTCACGCCATCGGTCTTCACTGGCAATGGACGCGTTTGAATCAAGTCCTTAGTTATGTGCTCTGCTCTTGTTCTGTGATTCTTGTTCACGCGAAGTGCAGGTCACTGACTTTACGGTATTGGAGTTGGAGTAGAAGATCAGCTGCTCCATCATCGACGATGGCCTGATCCACAAAGATGAATTTTGGTGCTGATACTTCCAGGGAGATACAGCCATGAATCCACCTAGGTTTTTCACGGTTAGACTAACCACAGCAAACCAGCGCTATGTGACCAGCTGCAATCGCACAAGGATATCAGCTGGAGGATGGCCAGAGACTCAAATTAGTAACAACCCATAACCTAATGGTCTACATTGAACTAAAGAGAGCATCTGGCAAAATATACATCACTACAGGATGGCCCCAGTTCATAGAAGCCACTGGTTTGCAGCTTAAAGAATATGTGGTTTTCAAAGTCTTATCACGCTCCAAGATGCATGTCATCATATAAGCCAAGAGTGGTTATCTTAGATGTCCAGTGCCAAGC AAACCAAGCAACTCACAGCTAAAGAAAAACGCGCTTCAGAAACCAAAACCACCAGAAAAAAAGAACCAAGACTAAGCCACACATGCAACACCCCATGCAACAGAAATTAAAAGCCGATATAGGGTCAGCTTGTACAGGCAACACCAAACGCACTATCAATGAAATGTGCTTCTGCACCGGGGAGGGACATCAATCTATCAACTGAACTCAAAGACTACTTCAAAGATATTGCGCAATTTCTGCACCCCTCAAACGAATTCTATGTCACAACCATAAATCCAACTTTCATGAAGCAGGATAAGGTGCACTTTTCAAAGCAATTCTCTATGACATACATTGCACTAATCGTGCGGAAGAAGACATCGCAGATCGAAGTACGGATTCCAGGGCACTCCTCAACCACCATGGTTCTTCACCACTCCACAGAAAAGCGCTTTAACCTGAAATCAGGATGGACCCATTTTCCAACAAGCAACGGCATACAAGTTGGAACAATCTGCATCTTTCACTTCCACCAGACTAATCAGCTGCAAGCAACAATAGATGTGCTGTGAGCAAGATGCTCATGCAACACAAGCTGTTATCCTTTTAATATCGTAGGCTATATTTTCACTCTGCTACTTCTATAGCTGTTAGTATCATTCTTTGTATGCTTTGCATGGGTACTCAATTTCCATGTAAAAATCACGCCCAAACTATTATGCCAGCGTGCTGTTACAGAACAGGAGCTGACGGTACCTTACGTACTGTCTTTGGTTGTTTTGCTTGTACTTATATGCAACCAAAGA                                                              ]
[-] EMBL CB629601             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCCAAGCAAAACCAAGCAACTCACAGCTAAAGAAAAACGCGCTTCAGAAACCAAAACCACCAGAAAAAAAGAACCAAGACTAAGCCACACATGCAACACCCCATGCAACAGAAATTAAAAGCCGATATAGGGTCAGCTTGTACAGGCAACACCAAACGCACTATCAATGAAATGTGCTTCTGCACCGGGGAGGGACATCAATCTATCAACTGAACTCAAAGACTACATCAAAGATATTGCGCAATTTCTGCACCCCTCAAACAAATTCTATGTCACAACCATAAATCCAACTTTCATGAAGCAGGATAAGGTGCACTTTTCAAAGCAATTCTCTATGACATACATTGCACTAATCGTGCGGAAGAAGACATCGCAGATCGAAGTACGGATTCCAGGGCACTCCTCAACCACCATGGTTCTTCACCACTCCACAGAAAAGCGCTTTAACCTGAAATCAGGATGGACCCATTTTCCAACAAGCAACGGCATACAAGTTGGAACAATCTGCATCTTTCACTTCCACCAGACTAATCAGCTGCAAGCAACAATAGATGTGCTGTGAGCAAGATGCTCATGCAACACAAGCTGTTATCCTTTTAATATCGTAGGCTATATTTTCACTCTGCTACTTCTATAGCTGTTAGTATCATTCTTTGTATGCTTTGCATGGGTACTCAATTTCCATGTAAAAGTCACGCCCAAACTATTATGCCAGCGTGCTGTTACAGAACAGGAGCTGACGGTACCTTACGTACTGTCTTTGGTTGTTTTGCTTGTACTTATATGCAACCAAAGACAATTCACCCTGTCCTGTATGAA                                       ]
[+] EMBL CB000060             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTGCGCAATTTCTGCACCCCTCAAACGAATTCTACTTTACAACCATAAATCCAACTTTCATGAAGCAGGATAA   GCACTTTTCAAAGCAATTCTCTATGACATACATTGCACTAATCGTGCGGAAGAAGACATCGCAGATCGAAGTACGGATTCCAGGGCACTCCTCAACCACCATGGTTCTTCACCACTCCACAGAAAAGCGCTTTAACCTGAAATCAGGATGGACCCATTTTCCAACAAGCAACGGCATACAAGTTGGAACAATCTGCATCTTTCACTTCCACCAGACTAATCAGCTGCAAGCAACAATAGATGTGCTGTGAGCAAGATGCTCATGCAACACAAGCTGTTATCCTTTTAATATCGTAGGCTATATTTTCACTCTGCTACTTCTATAGCTGTTAGTATCATTCTTTGTATGCTTTGCATGGGTACTCAATTTCCATGTAAAAATCACGCCCAAACTATTATGCCAGCGTGCTGTTACAGAACAGGAGCTGACGGTACCTTACGTACTGTCTTTGGTTGTTTTGCTTGTACTTATATGCAACCAAAGACAATTCACCCTGTCCTGAATGAACAACC                                  ]
[+] EMBL AU030260             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACAACCATAAATCCAACTTTCATGAAGCAGGATAA   GCACTTTTCAAAGCAATTCTCTATGACATACATTGCACTAATCGTGCGGAAGAAGACATCGCAGATCGAAGTACGGATTCCAGGGCACTCCTCAACCACCATGGTTCTTCACCACTCCACAGAAAAGCGCTTTAACCTGAAATCAGGATGGACCCATTTTCCAACAAGCAACGGCATACAAGTTGGAACAATCTGCATCTTTCACTTCCACCAGACTAATCAGCTGCAAGCAACAATAGATGTGCTGTGAGCAAGATGCTCATGCAACACAAGCTGTTATCCTTTTAATATCGTAGGCTATATTTTCACTCTGCTACTTCTATAGCTGTTAGTATCATTCTTTGTATGCTTTGCATGGGTACTCAATTTCCATGTAAAAATCACGCCCAAACTATTATGCCAGCGTGCTGTTACAGAACAGGAGCTGACGGTNCCTTACGTACTGTCTTTGGTTGTTTTGCTTGTACTTATATGCAACCAAAGACNATTCACCCTGTCCTGTATGAACAACCATGCTATCATATTCTGTTTCACCTTTAAAAAAAA]




>consensus_8251#0
CCCTACGACACTGAGGAGGCTTGCACAGAATAGAGAGGCACCAAGGAAAAGTAGCCTTAG
TAAGAAGGCTTACATTCAACAGTTGAAGTCAAGGAGGATTAGGCTAAGCCAGCTTGCACA
GCAAGTTCACGTGGCAAGAGTACAGATGCCTTTTGATCTGTTCTGTGATATATCTCCCAC
GAGTAAGAATTGGAAGATCTGTGCAACAATAGCAAGGAATGAATCTTGTCAGGTTGGAAC
GAGGATCAGACAATATTCCTCGAGAGATTGCGAGTGTTGTGTCCCAAAAATTCACTTTCT
GCGTTTCTGTCACCGAAAGGAGCTTCATGCAGAGGAACATCGCGTTTCAAGTCAATAGCA
TTGAAACTTCTTTGGCAGACAAGGCACTATTCCACAGGTTAGGGATCAGACATTGCAACT
CACATCATCTGTCATTTCACCTTTTGCTGGTGGTTCAAGTATATGTAGAGAAAGTGAGTG
TCCTGATCATACTTCGACACCGCCTGCTTCTTCTAATACCCCTGTGGGTGATATGGAGAA
AGCCCATGCTGATAGCAGGAAACGATGCCCCATTATGCGCCTTCCTCTAGGTGCATCGAA
GAAGCTAACTTTTGAGGTGGGCGCGTCCGAAGGAAAGGATATAGATACAGCTGTTGTTTC
AGAAAGGGTGCAGAATTAGCCTCCATTGATGGGAAAAAAAAGGGCACCGTCAATCCTGCT
GGTGCTCAGAGGACAAGAGCTTCCTATATGAAATAGAAGCTACAATTTCGCGCCATCGGT
CTTCACTGGCAATGGACGCGTTTGAATCAAGTCCTTAGTTATGTGCTCTGCTCTTGTTCT
GTGATTCTTGTTCACGCGAAGTGCAGGTCACTGACTTTACGGTATTGGAGTTGGAGTAGA
AGATCAGCTGCTCCATCATCGACGATGGCCTGATCCACAAAGATGAATTTTGGTGCTGAT
ACTTCCAGGGAGATACAGCCATGAATCCACCTAGGTTTTTCACGGTTAGACTAACCACAG
CAAACCAGCGCTATGTGACCAGCTGCAATCGCACAAGGATATCAGCTGGAGGATGGCCAG
AGACTCAAATTAGTAACAACCCATAACCTAATGGTCTACATTGAACTAAAGAGAGCATCT
GGCAAAATATACATCACTACAGGATGGCCCCAGTTCATAGAAGCCACTGGTTTGCAGCTT
AAAGAATATGTGGTTTTCAAAGTCTTATCACGCTCCAAGATGCATGTCATCATATAAGCC
AAGAGTGGTTATCTTAGATGTCCAGTGCCAAGCAAACCAAGCAACTCACAGCTAAAGAAA
AACGCGCTTCAGAAACCAAAACCACCAGAAAAAAAGAACCAAGACTAAGCCACACATGCA
ACACCCCATGCAACAGAAATTAAAAGCCGATATAGGGTCAGCTTGTACAGGCAACACCAA
ACGCACTATCAATGAAATGTGCTTCTGCACCGGGGAGGGACATCAATCTATCAACTGAAC
TCAAAGACTACTTCAAAGATATTGCGCAATTTCTGCACCCCTCAAACGAATTCTATGTCA
CAACCATAAATCCAACTTTCATGAAGCAGGATAAGGTGCACTTTTCAAAGCAATTCTCTA
TGACATACATTGCACTAATCGTGCGGAAGAAGACATCGCAGATCGAAGTACGGATTCCAG
GGCACTCCTCAACCACCATGGTTCTTCACCACTCCACAGAAAAGCGCTTTAACCTGAAAT
CAGGATGGACCCATTTTCCAACAAGCAACGGCATACAAGTTGGAACAATCTGCATCTTTC
ACTTCCACCAGACTAATCAGCTGCAAGCAACAATAGATGTGCTGTGAGCAAGATGCTCAT
GCAACACAAGCTGTTATCCTTTTAATATCGTAGGCTATATTTTCACTCTGCTACTTCTAT
AGCTGTTAGTATCATTCTTTGTATGCTTTGCATGGGTACTCAATTTCCATGTAAAAATCA
CGCCCAAACTATTATGCCAGCGTGCTGTTACAGAACAGGAGCTGACGGTACCTTACGTAC
TGTCTTTGGTTGTTTTGCTTGTACTTATATGCAACCAAAGACAATTCACCCTGTCCTGTA
TGAACAACCATGCTATCATATTCTGTTTCACCTTTAAAAAAAA
clustalw multiple alignements is not computed in this case