These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8261#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1176 fasta sequence [CCGCGTCCTATCCATTCCACGGTTCGTTTCCACCGCGCGCGCCACGGCGAGCTCGCCAACCCAGCCAGCCATGGCGGCGGCCGTGTCCGCGTGCAGCTCGCGGTGCCTCCGCCTGATCCTGGGGCGCCCTCCTCGAGCCCGCCTCGCGTCGGTTGTGGAGGTCGTCGAGAAGAGGAGGAGGGGCGGACTGGTGGCCGTGGCGGCGACGGAGGGGTCGGCGAAGTCGTCGGGGGAGGCGGACGAGCAGGTCCCCTCGTGGGCGCGCCCGGGCTCCGACGAGCCGCCGCCG-TGGGCACGCGAGGGCGGCGGCGGCGGGGGCCAGCAGGAGCCCGGCGCCGTCGAGCTCCCCTTCTTCGCCTACCTTCTCGCCTCCGCCATCACCGCCATCGCCGCCATCGGGTCCATCTTCGAGTACGCGAACCAGCGGCCGGTGTTCGGCGTGGTGAGCCCCGACAGCGCCCTGTACGCGCCGCTCCTAGGGTTCTTCGTCTTCACCGGGATACCCACCTCCGGATTCTTGTGGTTCAAGGCCGTGCAGACGGCGAACAAGGAGGCGGAGGAGCAGGATCGCCGGGACGGCTTCTCGTGACTGATTCAGCATATGAACATACGCATTTGCAGAGTAATTAAAGTTTGTGAATTACTGCTTGTGATTCGTGGTGTTAATTAAGTTGGTGACGCTGAAGAGGGGAGACGGATCTGCGTATTGACGCAATGAGGAGATGAATTAGCAAGGAAGAAATGGCGATGTTCAATTGTACATCACCGAAGGGAGCTAGCTGTTGAAGTGAAAGTGTAAACTCTGCCTTGTAGTTGAGAAATATTGAGTGTTTCGAGCGAGTATAATTACAGCGAATTATCTGAACACTGAATTATCGCCAAAAATTATTTGGTCCATATGCATCTGAGAGAAACTGTTTTCTTAGACCCGCTATTCTAATCTACTTTCTCTATTTCACAATGTAAGTCATTCTAGCATTTCCCACATTCGTATTGATGTTAATGAATCTAGACATATACATCTATCTAGATTCATTAACATCAATATGAACGTGAAAAATGCTAGAATAACTTATATTGCGAAATGAAGGAAGTATCTGTTAGTACTAAGTTTGTAATTTATACTCCCCCCGTCGCAAAATAAATGCAGTTTTGCACTGCTCATGTAAAAAAAGA] [+] EMBL AK111382 [CCGCGTCCTATCCATTCCACGGTTCGTTTCCACCGCGCGCGCCACGGCGAGCTCGCCAACCCAGCCAGCCATGGCGGCGGCCGTGTCCGCGTGCAGCTCGCGGTGCCTCCGCCTGATCCTGGGGCGCCCTCCTCGAGCCCGCCTCGCGTCGGTTGTGGAGGTCGTCGAGAAGAGGAGGAGGGGCGGACTGGTGGCCGTGGCGGCGACGGAGGGGTCGGCGAAGTCGTCGGGGGAGGCGGACGAGCAGGTCCCCTCGTGGGCGCGCCCGGGCTCCGACGAGCCGCCGCCG TGGGCACGCGAGGGCGGCGGCGGCGGGGGCCAGCAGGAGCCCGGCGCCGTCGAGCTCCCCTTCTTCGCCTACCTTCTCGCCTCCGCCATCACCGCCATCGCCGCCATCGGGTCCATCTTCGAGTACGCGAACCAGCGGCCGGTGTTCGGCGTGGTGAGCCCCGACAGCGCCCTGTACGCGCCGCTCCTAGGGTTCTTCGTCTTCACCGGGATACCCACCTCCGGATTCTTGTGGTTCAAGGCCGTGCAGACGGCGAACAAGGAGGCGGAGGAGCAGGATCGCCGGGACGGCTTCTCGTGACTGATTCAGCATATGAACATACGCATTTGCAGAGTAATTAAAGTTTGTGAATTACTGCTTGTGATTCGTGGTGTTAATTAAGTTGGTGACGCTGAAGAGGGGAGACGGATCTGCGTATTGACGCAATGAGGAGATGAATTAGCAAGGAAGAAATGGCGATGTTCAATTGTACATCACCGAAGGGAGCTAGCTGTTGAAGTGAAAGTGTAAACTCTGCCTTGTAGTTGAGAAATATTGAGTGTTTCGAGCGAGTATAATTACAGCGAATTATCTGAACACTGAATTATCGCCAAAAA ] [+] EMBL CB644932 [ ACCCCCTGCGCCACGGCGAGCTCGCCAACCCAGCCAGCCATGGCGGCGGCCGTGTCCGCGTGCAGCTCGCGGTGCCTCCGCCTGATCCTGGGGCGCCCTCCTCGAGCCCGCCTCGCGTCGGTTGTGGAGGTCGTCGAGAAGAGGAGGAGGGGCGGACTGGTGGCCGTGGCGGCGACGGAGGGGTCGGCGAAGTCGTCGGGGGAGGCGGACGAGCAGGTCCCCTCGTGGGCGCGCCCGGGCTCCGACGAGCCGCCGCCG TGGGCACGCGAGGGCGGCGGCGGCGGGGGCCAGCAGGAGCCCGGCGCCGTCGAGCTCCCCTTCTTCGCCTACCTTCTCGCCTCCGCCATCACCGCCATCGCCGCCATCGGGTCCATCTTCGAGTACGCGAACCAGCGGCCGGTGTTCGGCGTGGTGAGCCCCGACAGCGCCCTGTACGCGCCGCTCCTAGGGTTCTTCGTCTTCACCGGGATACCCACCTCCGGATTCTTGTGGTTCAAGGCCGTGCAGACGGCGAACAAAGAGGCGGATGAGCAGGATCGCCGGGACGGCTTCTCGTGACTGATTCAGCATATGAACCTACGCATTTGCAGAGTAATTAAAGTTTGTGAATTACTGCTTGTGATTCGTGGTGTTAATTAAGTTGGAGACGCTG ] [+] EMBL CB683494 [ TCGCCCACTCAGCCAGCCATGGCGGCGGCCGTGTCCGCGTGCAGCTCGCGGTGCCTCCGCCTGATCCTGGGGCGCCCTCCTCGAGCCCGCCTCGCGTCGGTTGTGGAGGTCGTCGAGAAGAGGAGGAGGGGCGGACTGGTGGCCGTGGCGGCGACGGAGGGGTCGGCGAAGTCGTCGGGGGAGGCGGACGAGCAGGTCCCCTCGTGGGCGCGCCCGGGCTCCGACGAGCCGCCGCCGATGGGCACGCGAGGGCGGCGGCGGCGGGGGCCATCAGGAGCCCGGCGCCGTCGAGCTCCCCTTCTTCGCCTACCTTCTCGCCTCCGCCATCACCGCCATCGCCGCCATCGGGTCCATCTTCGAGTACGCGAACCATCGGCCGGTGTTCGGCGTGGTGAGCCCCGACAGCGCCCTGTACGCGCCGCTCCTATGGTTCTTCGTCTTCACCGGGATACCCACCTCCGGATTCTTGTGGTTCAAGGCCGTGCAGACGGCGAACAAGGAGGCGGAGGAGCATGATCGCCGGGACGGCTTCTCTTGACTGATTCAGCATATGAACATACACATTTGCAGAGTAATTAAAGTTTGTGAATTACTGCTTGTGATTCGTGGTGGTAATTAAGTTGGTGACTCTGAAGAGGGGAGACCGATCTGCGTATTGACACACTGAGGACATGAATTACCAAGGAATAAATGGCGATGT ] [-] EMBL CB644933 [ GACGAACCGCCCCCG TGGGCACCCGAGGGCGGCGGCGGCGGGGGCCAGCAAGAACCCGGCGCCGTCGAGCTCCCCTTTTTTGCCTACCTTTTTGCCTCCGCCATCACCGCCATTGCCGCCATTGGGTCCATTTTTGAGTACGCGAACCAGCGGCCGGTGTTCGGCGTGGTGAGCCCCGACAGCGCCCTGTACGCGCCGCTCCTAGGGTTTTTTGTTTTCCCCGGGATACCCCCCTCCGGATTTTTGTGGTTCAAGGCCGTGCAGACGGCGAACAAGGAGGCGGAGGAGCAGGATCCCCGGGACGGCTTTTCGTGACTGATTCAGCATATGAACATACGCATTTGCAGAGTAATTAAAGTTTGTGAATTACTGCTTGTGATTCGTGGTGTTAATTAAGTTGGTGACGCTGAAGAGGGGAGACGGATTTGCGTATTGACGCAATGAGGAGATGAATTAGCAAGGAAGAAATGGCGATGTTCAATTGTACATCCCCGAAGGGAGCTAGCTGTTGAAGTGAAAGTGTAAACTTTGCCTTGTAGTTGAGAAATATTGAGTGTTTCGAGCGAGTATAATTACAGGGAATTATGGGGACCCTGAATTATCc ] [-] EMBL CB683888 [ TTCGGCGTGGTGAGCCCCGACAGCGCCCTGTACGCGCCGCTCCTAGGGTTCTTCGTCTTCACCGGGATACCCACCTCCGGATTCTTGTGGTTCAAGGCCGTGCAGACGGCGAACAAGGAGGCGGAGGAGCAGGATCGCCGGGACGGCTTCTCGTGACTGATTCAGCATATGAACATACGCATTTGCAGAGTAATTAAAGTTTGTGAATTACTGCTTGTGATTCGTGGTGTTAATTAAGTTGGTGACGCTGAAGAGGGGAGACGGATCTGCGTATTGACGCAATGAGGAGATGAATTAGCAAGGAAGAAATGGCGATGTTCAATTGTACATCACCGAAGGGAGCTAGCTGTTGAAGTGAAAGTGTAAACTCTGCCTTGTAGTTGAGAAATATTGAGTGTTTCGAGCGAGTATAATTACAGCGAATTATCTGAACACTGAATTATCGCCACGGATTATTTGGTCCATATGCATCTGAGAGAAACTGTTTTCTTAGACCCGCTATTCTAATCTACTTTCTCTATTTCACAATGTAAGTCATTCTAGCATTTCCCACATTCGTATTGATGTTAATGAATCTAGACATATACATCTATCTAGATTCATTAACATCAATATGAACGTGAAAAATGCTAGAATAACTTATATTGCGAAATGAAGGAAGTATCTGTTAGTACTAAGTTTGTAATTTATACTCCCCCCGTCGCAAAATAAATGCAGTTTTGCACTGCTCATGTAAAAAAAGA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||