These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8268#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 963 fasta sequence [CCTGGACTGAAGGAGTAGAAAAACTGCACACAAGCGAAGACTCGATCC-GGGTCTCTCAGGCCTACAAGCCCACGATTAAGCCCCCATCCCGTAATCCCCCACGCTCCATCGATCGTCGCCGCAGCCGATTCCTTCCAAATCTCTTCACCCGATTGAGGATACATCTAATCTGAGCTCTCTAGTCTGCAGATATGGCAAGCAAAAGGATTCAGAAGGAACTCATGGATTTGCGGAAGGATCCACCAACATCATGCAGTGCTGGGCCTGCAGGAGAGGATTTATTCCATTGGCAGGCCACAATCATGGGCCCTAGCGACAGCCCCTACGCTGGT-GGGGTGTTCTTTGTTAACATCCATTTCCCCCCTGACTACCCTTTTAAGCCTCCAAAAGTGAACTTCCAAACAAAGGTGTATCACCCAAACATCAACTCCAATGGAAGCATTTGCCTTGACATCCTCAAGGAGCAGTGGAGCCCAGCATTGACCATATCAAAGGTCCTCCTATCCATCAGCTCTCTTCTCACTGACCCCAACCCAGATGATCCCCTTGTCCCAGAGATCGCCCACGTCTACAAGAGCCAGAGGCCACGTTATGAGGAGACGGCGAGGGCCTGGACCCAGAAATACGCAATGGGTTAGCAGCTATCATTCTTGACAACGTTGCACCTTGCAAGAAATCGAGTCTAGTTGGTTGACTGTCATGTTAAGATCCAAGATGGTTATGTCTCTCTGAACTAATTGCCCGTTTCTGTACAGTACTGTCAAAATTGCATCATCTGTAAATCCCATGTTGATTCACACTTTGGTTTATACCCTGAAGAGCGTGCGTGATCATGTCATTTGTGATTATTGTAACCTTGTCAAGAAGCCAGTCAGACTTGTATGCATCAACACATATTTTTCATAATTTTGTGGTGGTTTGGTCCAAAAAAAAAAAAAAAACACTATCATGCCGTTACGTAGC] [+] EMBL CF281788 [CCTGGACTGAAGGAGTAGAAAAACTGCACACAAGCGAAGACTCGATCC GGGTCTCTCAGGCCTACAAGCCCACGATTAAGCCCCCATCCCGTAATCCCCCACGCTCCATCGATCGTCGCCGCAGCCGATTCCTTCCAAATCTCTTCACCCGATTGAGGATACATCTAATCTGAGCTCTCTAGTCTGCAGATATGGCAAGCAAAAGGATTCAGAAGGAACTCATGGATTTGCGGAAGGATCCACCAACATCATGCAGTGCTGGGCCTGCGGGAGAGGATTTATTCCATTGGCAGGCCACAATCATGGGCCCTAGCGACAGCCCCTACGCTGGT GGGGTGTTCTTTGTTAACATCCATTTCCCCCCTGACTACCCTTTTAAGCCTCCAAAAGTGAACTTCCAAACAAAGGTGTATCACCCAAACATCAACTCCAATGGAAGCATTTGCCTTGACATCCTCAAGGAGCAGTGGAGCCCAGCATTGACCATATCAAAGGTCCTCCTATCCATCAGCTCTCTTCTCACTGACCCCAACCCAGATGATCCCCTTGTCCCAGAGATCGCCCACGTCTACAAGAGCCAGAGGCCACGTTATGAGGAGACGGCGAGGGCCTGGACCCAGAAATACGCAATGGGTTAGCAGCTATCATTCTTGACAACGTT ] [+] EMBL AK065902 [ ACTCGATCCAGGGTCTCTCAGGCCTACAAGCCCACGATTAAGCCCCCATCCCGTAATCCCCCACGCTCCATCGATCGTCGCCGCAGCCGATTCCTTCCAAATCTCTTCACCCGATTGAGGATACATCTAATCTGAGCTCTCTAGTCTGCAGATATGGCAAGCAAAAGGATTCAGAAGGAACTCATGGATTTGCGGAAGGATCCACCAACATCATGCAGTGCTGGGCCTGCAGGAGAGGATTTATTCCATTGGCAGGCCACAATCATGGGCCCTAGCGACAGCCCCTACGCTGGT GGGGTGTTCTTTGTTAACATCCATTTCCCCCCTGACTACCCTTTTAAGCCTCCAAAAGTGAACTTCCAAACAAAGGTGTATCACCCAAACATCAACTCCAATGGAAGCATTTGCCTTGACATCCTCAAGGAGCAGTGGAGCCCAGCATTGACCATATCAAAGGTCCTCCTATCCATCAGCTCTCTTCTCACTGACCCCAACCCAGATGATCCCCTTGTCCCAGAGATCGCCCACGTCTACAAGAGCCAGAGGCCACGTTATGAGGAGACGGCGAGGGCCTGGACCCAGAAATACGCAATGGGTTAGCAGCTATCATTCTTGACAACGTTGCACCTTGCAAGAAATCGAGTCTAGTTGGTTGACTGTCATGTTAAGATCCAAGATGGTTATGTCTCTCTGAACTAATTGCCCGTTTCTGTACAGTACTGTCAAAATTGCATCATCTGTAAATCCCATGTTGATTCACACTTTGGTTTATACCCTGAAGAGCGTGCGTGATCATGTCATTTGTGATTATTGTAACCTTGTCAAGAAGCCAGTCAGACTTGTATGCATCAACACATATTTTTCATAATTTTGTGGT ] [+] EMBL CF294706 [ CTCGATCC GGGTCTCTCATGCCTACAAGCCCACGATTAAGCCCCCATCCCGTAATCCCCCACGCTCCATCGATCGTCGCCGCAGCCGATTCCTTCCAAATCTCTTCACCCGATTGAGGATACATCTAATCTGAGCTCTCTAGTCTGCAGATATGGCAAGCAAAAGGATTCAGAAGGAACTCATGGATTTGCGGAAGGATCCACCAACATCATGCAGTGCTGGGCCTGCAGGAGAGGATTTATTCCATTGGCAGGCCACAATCATGGGCCCTAGCGACAGCCCCTACGCTGGTNGGGGTGTTCTTTGTTAACATCCATTTCCCCCCTGACTACCCTTTTAAGCCTCCAAAAGTGAACTTCCAAACAAAGGTGTATCACCCAAACATCAACTCCAATGGAAGCATTTGCCTTGACATCCTCAAGGAGCAGTGGAGCCCAGCATTGACCATATCAAAGGTCCTCCTATCCATCAGCTCTCTTCTCACTGACCCCAACCCAGATGATCCCCTTGTCCCAGAGATCGCC ] [+] EMBL AK059627 [ ca GGGTCTCTCAGGCCTACAAGCCCACGATTAAGCCCCCATCCCGTAATCCCCCACGCTCCATCGATCGTCGCCGCAGCCGATTCCTTCCAAATCTCTTCACCCGATTGAGGATACATCTAATCTGAGCTCTCTAGTCTGCAGATATGGCAAGCAAAAGGATTCAGAAGGAACTCATGGATTTGCGGAAGGATCCACCAACATCATGCAGTGCTGGGCCTGCAGGAGAGGATTTATTCCATTGGCAGGCCACAATCATGGGCCCTAGCGACAGCCCCTACGCTGGT GGGGTGTTCTTTGTTAACATCCATTTCCCCCCTGACTACCCTTTTAAGCCTCCAAAAGTGAACTTCCAAACAAAGGTGTATCACCCAAACATCAACTCCAATGGAAGCATTTGCCTTGACATCCTCAAGGAGCAGTGGAGCCCAGCATTGACCATATCAAAGGTCCTCCTATCCATCAGCTCTCTTCTCACTGACCCCAACCCAGATGATCCCCTTGTCCCAGAGATCGCCCACGTCTACAAGAGCCAGAGGCCACGTTATGAGGAGACGGCGAGGGCCTGGACCCAGAAATACGCAATGGGTTAGCAGCTATCATTCTTGACAACGTTGCACCTTGCAAGAAATCGAGTCTAGTTGGTTGACTGTCATGTTAAGATCCAAGATGGTTATGTCTCTCTGAACTAATTGCCCGTTTCTGTACAGTACTGTCAAAATTGCATCATCTGTAAATCCCATGTTGATTCACACTTTGGTTTATACCCTGAAGAGCGTGCGTGATCATGTCATTTGTGATTATTGTAACCTTGTCAAGAAGCCAGTCAGACTTGTATGCATCAACACATATTTTTCATAATTTTGTGGTGGTTTGGTCCA ] [-] EMBL CF294705 [ AAACATCAACTCCAATGGAAGCATTTGCCTTGACATCCTCAAGGAGCAGTGGAGCCCAGCATTGACCATATCAAAGGTCCTCCTATCCATCAGCTCTTTTCTCANTGACCCCAACCCAGATGATCCCCTTGTCCCAGAGATCGCCCACGTCTACAAGAGCCAGAGGCCACGTTATGAGGAGACGGCGAGGGCCTGGACCCAGAAATACGCAATGGGTTAGCAGCTATCATTCTTGACAACGTTGCACCTTGCAAGAAATCGAGTCTAGTTGGTTGACTGTCATGTTAAGATCCAAGATGGTTATGTCTCTCTGAACTAATTGCCCGTTTCTGTACAGTACTGTCAAAATTGCATCATCTGTAAATCCCATGTTGATTCACACTTTGGTTTATACCCTGAAGAGCGTGCGTGATCATGTCATTTGTGATTATTGTAACCTTGTCAAGAAGCCAGTCAGACTTGTATGCATCAACACATATTTTTCATAATTTTGTGGTGGTTTGGTCCAAAAAAAAAAAAAAAACACTATCATGCCGTTACGTAGC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||