cluster # 827

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Oryza sativa
cluster # 827 cluster # 827 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_827#0 length = 682 sequences # 2

consensusID : consensus_827#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 682
fasta sequence

                              [TTTTTTTTTTTAGGATAAATGACACATTTTATTCGGGAATACATTACACAAATTACACATTACACAATATTCTTTGCTATAGCATGTAGGGGGGTCGCCATAGACAGTGTTATTCCAAACTTTTCTGCCATGTCTACGCCACCGTTCTTCTTCACTACTTCAGGCAGTGTCCACTGAAACTGATGAACTAGCGAGGCAAGCATAACATGCAGCATTCTATTTGCTACTGGATATCCGAGGCAGAAACGTCGTCCGGCACTGAATGGAATAAGTTCTATGTTGGTACTACCTGATGACAAACTGATCTCCTTTTGTAGGAATCTCTCTGGTATAAACTTGTCTGGTTCAATCCAAACCTCTGAATTCTGATGAATTGCCCATGTATTTACTATCACAGTGGTTTCTTTGGGGATTTTATACCCTTGTATTTCAACTGGGACGGCTGCTTTGTACATTAGCAGTGGTATGGCTGGATGTAGCCTGTGTGTTTCCTTGATGACTGCTTGAAGATAGGGAAGTTGGGCGATGNCTTCTTCATCTATGCAAGTTTTTGAGCCAATGACCTTTTTGAGCTCTTCTTGTAATTTTGTCATAGTTTGAGGATTCTGGAGTAGCTCGGCCATTGCCCACTCTATTACAGCTGAGCTTGTTTCACTGCCCGCCATTAGTAAATCGGCCATAA]

[+] EMBL CA759092             [TTTTTTTTTTTAGGATAAATGACACATTTTATTCGGGAATACATTACACAAATTACACATTACACAATATTCTTTGCTATAGCATGTAGGGGGGTCGCCATAGACAGTGTTATTCCAAACTTTTCTGCCATGTCTACGCCACCGTTCTTCTTCACTACTTCAGGCAGTGTCCACTGAAACTGATGAACTAGCGAGGCAAGCATAACATGCAGCATTCTATTTGCTACTGGATATCCGAGGCAGAAACGTCGTCCGGCACTGAATGGAATAAGTTCTATGTTGGTACTACCTGATGACAAACTGATCTCCTTTTGTAGGAATCTCTCTGGTATAAACTTGTCTGGTTCAATCCAAACCTCTGAATTCTGATGAATTGCCCATGTATTTACTATCACAGTGGTTTCTTTGGGGATTTTATACCCTTGTATTTCAACTGGGACGGCTGCTTTGTACATTAGCAGTGGTATGGCTGGATGTAGCCTGTGTGTTTCCTTGATGACTGCTTGAAGATAGGGAAGTTGGGCGATGNCTTCTTCATCTATGCAAGTTTTTGAGCCAATGACCTTTTTGAGCTCTTCTTGTAATTTTGTCATAGTTTGAGGATTCTGGAGTAGCTCGGCCATTGCCCACTCTATTACAGCTGAGCTTGTTTCACTGCCCGCCATTAGTAAATCGGCCATAA]
[-] EMBL CA764602             [            GGATAAATGACACATTTTATTCGGGAATACATTACACAAATTACACATTACACAATATTCTTTGCTATAGCATGTAGGGGGGTCGCCATAGACAGTGTTATTCCAAACTTTTCTGCCATGTCTACGCCACCGTTCTTCTTCACTACTTCAGGCAGTGTCCACTGAAACTGATGAACTAGCGAGGCAAGCATAACATGCAGCATTCTATTTGCTACCGGATATCCGAGGCAGAAACGTCGTCCGGCACTGAATGGAATAAGTTCTATGTTGGTACTACCTGATGACAAACTGATCTCCTTTTGTAGGAATCTCTCTGGTATAAACTTGTCTGGTTCAATCCAAACCTCTGAATTCTGATGAATTGCCCATGTATTTACTATCACAGTGGTTTCTTTGGGGATTTTATACCCTTGTATTTCAACTGGGACGGCTGCTTTGTACATTAGCAGTGGTATGGCTGGATGTAGCCTGTGTGTTTCCTTGATGACTGCTTGAAGATAGGGAAGTTGGTCGATGTCTTCT                                                                                                                                                    ]




>consensus_827#0
TTTTTTTTTTTAGGATAAATGACACATTTTATTCGGGAATACATTACACAAATTACACAT
TACACAATATTCTTTGCTATAGCATGTAGGGGGGTCGCCATAGACAGTGTTATTCCAAAC
TTTTCTGCCATGTCTACGCCACCGTTCTTCTTCACTACTTCAGGCAGTGTCCACTGAAAC
TGATGAACTAGCGAGGCAAGCATAACATGCAGCATTCTATTTGCTACTGGATATCCGAGG
CAGAAACGTCGTCCGGCACTGAATGGAATAAGTTCTATGTTGGTACTACCTGATGACAAA
CTGATCTCCTTTTGTAGGAATCTCTCTGGTATAAACTTGTCTGGTTCAATCCAAACCTCT
GAATTCTGATGAATTGCCCATGTATTTACTATCACAGTGGTTTCTTTGGGGATTTTATAC
CCTTGTATTTCAACTGGGACGGCTGCTTTGTACATTAGCAGTGGTATGGCTGGATGTAGC
CTGTGTGTTTCCTTGATGACTGCTTGAAGATAGGGAAGTTGGGCGATGNCTTCTTCATCT
ATGCAAGTTTTTGAGCCAATGACCTTTTTGAGCTCTTCTTGTAATTTTGTCATAGTTTGA
GGATTCTGGAGTAGCTCGGCCATTGCCCACTCTATTACAGCTGAGCTTGTTTCACTGCCC
GCCATTAGTAAATCGGCCATAA

clustalw multiple alignements is not computed in this case