These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8270#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2094 fasta sequence [AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAATTCTAGAAGATTGTGATGATGTGGAAGATGTGGAAGGTTGTGGTGGAAATAGTGTGGATCATCTTGGCAGTTTACTTCACTTGAGGTACCTTGGGTTACCAGATACTGACATTAGCAAGCTCCCAAAGGAAGTAGGAGGTCTCAAGTTTCTCCAGACTTTGGATTTATGGAATACTGGCATAAAGGAGCTGCCACAGGCAGTGGGCCTGTTGACACAACTGTTGTGCTTACACACTGATCGGAGTACGACAGTGCCAGCCGGTTTGATCGGCAAGCTGACGTCTTTGCAAGAGCTGTGGACATGGCCTGGTTCCGCATACTACCGCGACATGGACCCAGTGGCTGGTGCCGCTTCGACACGCC-GTTTTGCGAAGGAGCTGGGTAACCTGAGGGAACTGAGGGTGCTCCGTGCTAGTATTTATGCAGTTGATGAGAGCACGGAGAGAGATTTGATGGAGTCCCTGCTTGGCAATCTTCAGAAAATTCAGAGTGTGGATATTTTTGGATCACCACTAGAGAGGGGAGTCACATGGGATGCAGGATTTGCCTCTCGTTGGCGCCTCCGGCACCTGAATTTGGAATGCTTCGAGCTCTCTAGACTGCCAGCGTCGGTTAACTCCTCGCTTCTTCCGAACCTCTCCCATCTAGACATGAAAGTGCAGGTTATGCAAGAGCAGGACATGGAAACTCTTGGGAGGCTGCCCGAGCTGCGTTGCCTTGTACTGGATTCGCGTTACACCAAAGTGGTAAGAATTAAGAATACTGGCAGTGATTGCTACTTCAAGAAGTTGAGATTCTTCACGATGGGCAGTTCATCCATCTTGTTTGATGTGCAAGGCAGTGAATGCGCTATCATGCCAAGCCTTGAATCCCTTGCATTTAGTGTCCATGTGCGGTTCCTCAAAGACGCGGACCTGCTTTGTTTCAAAAAACTTGGCTTGGTGAACCTCCCTAGCTCGCTTCAGCGAGTCACCGTTGAAATCAACTCTTGGGATGCCCATGATACAGAGGTGGAAGAAGCGGAGGCCATGTTGGAGCATGCAGCCATCGTCCATCCTAATCATCCCATCTTCCAAACCACACGGCCATTTGGAAAATATATCATGCTCTTACCTGACCAAGAGCCAAGCAGCACCAATCCTAAAGTTGATAGATGTGATGTCAATCTGCGAAAGAACGA-CGGAGACCATTTGGACTTCCGATGGCTGTTGATGAATCCACGCGTCGAGAAATTCTGTGTCTCCATAAACTGCGAGAATGCTAGTCTTGAGGAGGTTGAGGAAGCAGAGGCGGCTGCAAGATATGCAGTCGATGTCCATCCCAATTGTCCCACTCTTGAACTGGTGAGATATGGTGAAGATAAGATGGTGCTACCCAACCCCCAGCAACAGGTTGGTTATCTATCTTGATGACTTTCACAATCATGTTGCTGGTTGTAAGAATGAATCATCACATACTTGGCAACTTCGGAGTATATGCCTGTGAAACTCTAGACAGAATGTATTGGATATCGTTCACTCCAAAAATACAAGTTTACAACACAAGGATTCTATACCACTAGTTTCTGATGGAAATGGCAGCAAGCATGAATGAGCTGAACATGTCAACCTTCCAGACGTGTGTGTGCTCATGCTGTTTACTTTGCAGATCGTTTAACACATCGTGATATTGAACAGACAACAAAAATATCACCTGTATATTGAAATGAAGTGAGGAAATCTCTGATGATGTCAATGATAATTTGCTAGAAAGTTGTTCAAGGTCAGTATGTAAGGACCACATTTTTTTTTCTGGTTGTGGATAGTTGAATATCATAGAATTATTTCTGAGGTAACGCATAAAATGTCTCCTGCATCTTATTAGAACGTATTGGATTAGAAAGGGGATTGTGTGCAGTGGAAGGAATTTGGAGTTGCGTAGTGGCAAATATACAATTGTTCGTAATATAGATCGCCCCACTGGAGCTGGAACATCTTAGGCTCCTAGCTGCATGGCTTGTATGATAAATTGGCGGATGCTTTGCAGTTTGCAGCTGAAAATTTATTTCTTC] [+] EMBL AK106559 [AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAATTCTAGAAGATTGTGATGATGTGGAAGATGTGGAAGGTTGTGGTGGAAATAGTGTGGATCATCTTGGCAGTTTACTTCACTTGAGGTACCTTGGGTTACCAGATACTGACATTAGCAAGCTCCCAAAGGAAGTAGGAGGTCTCAAGTTTCTCCAGACTTTGGATTTATGGAATACTGGCATAAAGGAGCTGCCACAGGCAGTGGGCCTGTTGACACAACTGTTGTGCTTACACACTGATCGGAGTACGACAGTGCCAGCCGGTTTGATCGGCAAGCTGACGTCTTTGCAAGAGCTGTGGACATGGCCTGGTTCCGCATACTACCGCGACATGGACCCAGTGGCTGGTGCCGCTTCGACACGCC GTTTTGCGAAGGAGCTGGGTAACCTGAGGGAACTGAGGGTGCTCCGTGCTAGTATTTATGCAGTTGATGAGAGCACGGAGAGAGATTTGATGGAGTCCCTGCTTGGCAATCTTCAGAAAATTCAGAGTGTGGATATTTTTGGATCACCACTAGAGAGGGGAGTCACATGGGATGCAGGATTTGCCTCTCGTTGGCGCCTCCGGCACCTGAATTTGGAATGCTTCGAGCTCTCTAGACTGCCAGCGTCGGTTAACTCCTCGCTTCTTCCGAACCTCTCCCATCTAGACATGAAAGTGCAGGTTATGCAAGAGCAGGACATGGAAACTCTTGGGAGGCTGCCCGAGCTGCGTTGCCTTGTACTGGATTCGCGTTACACCAAAGTGGTAAGAATTAAGAATACTGGCAGTGATTGCTACTTCAAGAAGTTGAGATTCTTCACGATGGGCAGTTCATCCATCTTGTTTGATGTGCAAGGCAGTGAATGCGCTATCATGCCAAGCCTTGAATCCCTTGCATTTAGTGTCCATGTGCGGTTCCTCAAAGACGCGGACCTGCTTTGTTTCAAAAAACTTGGCTTGGTGAACCTCCCTAGCTCGCTTCAGCGAGTCACCGTTGAAATCAACTCTTGGGATGCCCATGATACAGAGGTGGAAGAAGCGGAGGCCATGTTGGAGCATGCAGCCATCGTCCATCCTAATCATCCCATCTTCCAAACCACACGGCCATTTGGAAAATATATCATGCTCTTACCTGACCAAGAGCCAAGCAGCACCAATCCTAAAGTTGATAGATGTGATGTCAATCTGCGAAAGAACGA CGGAGACCATTTGGACTTCCGATGGCTGTTGATGAATCCACGCGTCGAGAAATTCTGTGTCTCCATAAACTGCGAGAATGCTAGTCTTGAGGAGGTTGAGGAAGCAGAGGCGGCTGCAAGATATGCAGTCGATGTCCATCCCAATTGTCCCACTCTTGAACTGGTGAGATATGGTGAAGATAAGATGGTGCTACCCAACCCCCAGCAACAGGTTGGTTATCTATCTTGATGACTTTCACAATCATGTTGCTGGTTGTAAGAATGAATCATCACATACTTGGCAACTTCGGAGTATATGCCTGTGAAACTCTAGACAGAATGTATTGGATATCGTTCACTCCAAAAATACAAGTTTACAACACAAGGATTCTATACCACTAGTTTCTGATGGAAATGGCAGCAAGCATGAATGAGCTGAACATGTCAACCTTCCAGACGTGTGTGTGCTCATGCTGTTTACTTTGCAGATCGTTTAACACATCGTGATATTGAACAGACAACAAAAATATCACCTGTATATTGAAATGAAGTGAGGAAATCTCTGATGATGTCAATGATAATTTGCTAGAAAGTTGTTCAAGGTCAGTATGTAAGGACCACATTTTTTTTTCTGGTTGTGGATAGTTGAATATCATAGAATTA ] [+] EMBL C28458 [ TGTNATGATGTGGAAGATGTGGAAGGTTGTGGTGGAAATAGTGTGGATCATCTTGGCAGTTTACTTCACTTGAGGTACCTTGGGTTACCAGATACTGACATTAGCAAGCTCCCAAAGGAAGTAGGAGGTCTCAAGTTTCTCCAGACTTTGGATTTATGGAATACTGGCATAAAGGAGCTGCCACAGGCAGTGGGCCTGTTGACACAACTGTTGTGCTTACACACTGATCGGAGTACGACAGTNCCAGCCGGTTTGATCGGCAAGCTGACGTCTTTGCAAGAGCTGTGGACATGGCCTGGTTCCGCATACTACCGCGACATGGACCCAGTGGCTGGTGCCGCTTCGACANGCC GTTTT CGAAGGAGCTGGGTAACCTNAGGG ACTTAGGGTG TCCGTGCTAGTATTTATGCAGTTGATGAGAGCACGG ] [+] EMBL CB669980 [ GCCNGTTTTGCGAAGGAGCTGGGTAACCTGAGGGAACTGAGGGTGCTCCGTGCTAGTATTTATGCAGTTGATGAGAGCACGGAGAGAGATTTGATGGAGTCCCTGCTTGGCAATCTTCAGAAAATTCAGAGTGTGGATATTTTTGGATCACCACTAGAGAGGGGAGTCACATGGGATGCAGGATTTGCCTCTCGTTGGCGCCTCCGGCACCTGAATTTGGAATGCTTCGAGCTCTCTAGACTGCCAGCGTCGGTTAACTCCTCGCTTCTTCCGAACCTCTCCCATCTAGACATGAAAGTGCAGGTTATGCAAGAGCAGGACATGGAAACTCTTGGGAGGCTGCCCGAGCTGCGTTGCCTTGTACTGGATTCGCGTTACACCAAAGTGGTAAGAATTAAGAATACTGGCAGTGATTGCTACTTCAAGAAGTTGAGATTCTTCACGATGGGCAGTTCATCCATCTTGTTTGATGTGCAAGGCAGTGAATGCGCTATCATGCCAAGCCTTGAATCCCTTGCATTTAGTGTCCATGTGCGGTTCCTCAAAGACGCGGACCTGCTTTGTTTCAAAAAACTTGGCTTGGTGAACCTCCCTAGCTCGCTTCAGCGAGTCACCGTTGAAATCAACTCTTGGGATGCCCATGATACAGAGGTGGAAGAAGCGGAGGCCATGTTGGAGCATGCAGCCATCGTCCATCCTAATCATCCCATCTTCCAAACCACACGGCCATTTGGAAAATATATCATGCTCTTACCTGACCAAGAGCCAAGCAGCACCAATCCTAAAGTTGATAGATGTGATGTCAATCTGCGAAAGAACGA CGGAGACC ] [+] EMBL AU092964 [ CTGCGAAAGAACGACCGGAGNCCATTTGGACTCCCGATGGCTGTTGATGAATCCACGCGTCNAGAAATTCTGTGTCTCCATAAACTGCGAGAATGCTAGTCTTGAGGAGGTTGAGGAAGCAGAGGCGGCTGCAAGATATGCAGTCGATGTCCATCCCAATTGTCCCACTCTTGAACTGGTGAGATATGGTGAAGATAAGATGGTGCTACCCAACCCCCAGCAACAGGTTGGTTATCTATCTTGATGACTTTCACAATCATGTTGCTGGTTGTAAGAATGAATCATCACATACTTGGCAACTTCGGAGTATATGCCTGTGAAACTCTAGACAGAATGTATTGGATATCGTTCACTCCAAAAATACAAGTTTACAACACAAGGATTCTATACCACTAGTTTCTGATGGAAATGGCAGCAAGCATGAATGAGCTGAACATGTCAACCTTCCAGACGTGTGTGTGCTCATGCTGTTTACTTTGCAGATCGTTTAACACATCGTGATATTGAACAGACAACAAAAATATCACCTGTATATTGAAATGAAGTGAGGAAATCTCTGATGATGTCAATGATAAaaaaaa ] [-] EMBL CB669981 [ GCAGTCGATGTCCATCCCAATTGTCCCACTCTTGAACTGGTGAGATATGGTGAAGATAAGATGGTGCTACCCAACCCCCAGCAACAGGTTGGTTATCTATCTTGATGACTTTCACAATCATGTTGCTGGTTGTAAGAATGAATCATCACATACTTGGCAACTTCGGAGTATATGCCTGTGAAACTCTAGACAGAATGTATTGGATATCGTTCACTCCAAAAATACAAGTTTACAACACAAGGATTCTATACCACTAGTTTCTGATGGAAATGGCAGCAAGCATGAATGAGCTGAACATGTCAACCTTCCAGACGTGTGTGTGCTCATGCTGTTTACTTTGCAGATCGTTTAACACATCGTGATATTGAACAGACAACAAAAATATCACCTGTATATTGAAATGAAGTGAGGAAATCTCTGATGATGTCAATGATAATTTGCTAGAAAGTTGTTCAAGGTCAGTATGTAAGGACCACATTTTTTTTTCTGGTTGTGGATAGTTGAATATCATAGAATTATTTCTGAGGTAACGCATAAAATGTCTCCTGCATCTTATTAGAACGTATTGGATTAGAAAGGGGATTGTGTGCAGTGGAAGGAATTTGGAGTTGCGTAGTGGCAAATATACAATTGTTCGTAATATAGATCGCCCCACTGGAGCTGGAACATCTTAGGCTCCTAGCTGCATGGCTTGTATGATAAATTGGCGGATGCTTTGCAGTTTGCAGCTGAAAATTTATTTCTTC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||