These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8272#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1544 fasta sequence [TTGGCCATTTTCTCAAGCACCTAATTTGCTTGGATCCTTCTTGCACTTGCAACTTGCAAAACAACCAAAGGAAATACTAGTAGCATCATCAAGCGAAGAAGGTCAGCTCAAAAGGGCGTTGTGTGCTTCGCCTCGCGAAATGAGAGTCGCATTGCTCCGGAGATGATGGTCGCCGGAGTAATCAGGAGCAACCAGGATGGCGGCGGCGGCGGCGGGACGGTGTCCGGTGCGGCGAGGATTAGCCCGGCGGTGGTGTTCGTCCTGGTGATATTGGCTGTGGTGCTGTTCGTGTCCGGGTTGCTGCATCTTCTTGTCAGATTCTTGCTCAGGCGCGGCCGTGGGCGAGATGGCGGCGGCGGCGGCGACGCGGAGGCGGCGGAGGGTGTGGAGGAGTCGGCGTTGCAACGGCAGCTGCAGCAGCTGTTCCACCTGCACGACGCCGGGCTGGACCAGGACGTCATCGACGCGCTCCCGGTGTTCATGTACCGGGAGGTGGTGGTCGGCGTCGGCGGCGGCGGCGGCGCGGGCGGCGGAGCCAAGGAGCCGTTCGACTGCGCGGTCTGCCTGTGCGAGTTCGCCGGCGACGACCGGCTCCGGCTGCTGCCGGTGTGCGGCCACGCGTTCCACATCGACTGCATCGACACGTGGCTGCTCTCCAACTCCACGTGCCCGCTCTGCCGCGCCGCGCTCGGCGCCGACGCCGCCGCTCTGTTCGACGCCGCGTTCGACGAGATGGCCGACGAGGAGGACCGGAAGCAGCAGGAGGACGCCGTGTTCCCCGTCCGCCTCGGCAAGTTCAAGAACCTCTCCAGGGCGGTCGGCCCCGTCCACGACCGCGACGACGCCGCCGCCGCCGCCGCCGGCGTCGGCGTCGGCGGTGGCATTATCACGCGAGAGGAAGGCGAGTCGAGCAGCAGCAGCTTGGACGCCAGGCGGTGCTTCTCCATGGGCTCCTACCAGTACGTCCTCGCCGAGGCGAGCTTGCAGGTGTCCGTACACCGGAGGCACGGCGACGGCAATGGCAGGGCGAGGCTGAGAGGGCTCGCCGGCGCCAACCCGGCCGGCAACGACGCCGCCGCCGCCGCCGACGGGAAGAAGATCGGCGCCGGCAGCAAGGGCGACAGCTTCTCGGTGTCCAAGATTTGGCAGTGGCCGCGGCAAGGCAAGGGGAAGCTGCCGGTGCTCGCCTCCGACGACTCGCCGGCGGTGGACGGCCGGCTGCCGTGGCCGAGGAGAAGCCCCGGGGCTTCCTGATGCTGATTTCCATGGTGTGTTTGCAATTTGCAAAACTTTTTCAGAGCTAATTCTGCTCATCTTTTTAACACCGTATTAATCAATCTGTTCATAGCCAATTCGTTCCATTCTACTTTTGCTGTTCGATTGCATCACCTCGTGTGTTCATGATGAACAAATAGCTTCATATAGAGGATTTCTTACTCTGCAGAATTAGTATTGGTAGTTGCAATACTAAACAAAAGAGGCTAAATTTATGAACAAAAATACTAGTTTATTTCCTATGGGCTATGGATATCCACCATTTGCAA] [+] EMBL AK100240 [TTGGCCATTTTCTCAAGCACCTAATTTGCTTGGATCCTTCTTGCACTTGCAACTTGCAAAACAACCAAAGGAAATACTAGTAGCATCATCAAGCGAAGAAGGTCAGCTCAAAAGGGCGTTGTGTGCTTCGCCTCGCGAAATGAGAGTCGCATTGCTCCGGAGATGATGGTCGCCGGAGTAATCAGGAGCAACCAGAATGGCGGCGGCGGCGGCGGGACGGTGTCCGGTGCGGCGAGGATTAGCCCGGCGGTGGTGTTCGTCCTGGTGATATTGGCTGTGGTGCTGTTCGTGTCCGGGTTGCTGCATCTTCTTGTCAGATTCTTGCTAAGGCGCGGCCGTGGGCGAGATGGCGGCGGCGGCGGCGACGCGGAGGCGGCGGAGGGTGTGGAGGAGTCGGCGTTGCAACGGCAGCTGCAGCAGCTGTTCCACCTGCACGACGCCGGGCTGGACCAGGACGTCATCGACGCGCTCCCGGTGTTCATGTACCGGGAGGTGGTGGTCGGCGTCGGCGGCGGCGGCGGCGCGGGCGGCGGAGCCAAGGAGCCGTTCGACTGCGCGGTCTGCCTGTGCGAGTTCGCCGGCGACGACCGGCTCCGGCTGCTGCCGGTGTGCGGCCACGCGTTCCACATCGACTGCATCGACACGTGGCTGCTCTCCAACTCCACGTGCCCGCTCTGCCGCGCCGCGCTCGGCGCCGACGCCGCCGCTCTGTTCGACGCCGCGTTCGACGAGATGGCCGACGAGGAGGACCGGAAGCAGCAGGAGGACGCCGTGTTCCCCGTCCGCCTCGGCAAGTTCAAGAACCTCTCCAGGGCGGTCGGCCCCGTCCACGACCGCGACGACGCCGCCGCCGCCGCCGCCGGCGTCGGCGTCGGCGGTGGCATTATCACGCGAGAGGAAGGCGAGTCGAGCAGCAGCAGCTTGGACGCCAGGCGGTGCTTCTCCATGGGCTCCTACCAGTACGTCCTCGCCGAGGCGAGCTTGCAGGTGTCCGTACACCGGAGGCACGGCGACGGCAATGGCAGGGCGAGGCTGAGAGGGCTCGCCGGCGCCAACCCGGCCGGCAACGACGCCGCCGCCGCCGCCGACGGGAAGAAGATCGGCGCCGGCAGCAAGGGCGACAGCTTCTCGGTGTCCAAGATTTGGCAGTGGCCGCGGCAAGGCAAGGGGAAGCTGCCGGTGCTCGCCTCCGACGACTCGCCGGCGGTGGACGGCCGGCTGCCGTGGCCGAGGAGAAGCCCCGGGGCTTCCTGATGCTGATTTCCATGGTGTGTTTGCAATTTGCAAAACTTTTTCAGAGCTAATTCTGCTCATCTTTTTAACACCGTATTAATCAATCTGTTCATAGCCAATTCG ] [+] EMBL CB647843 [ AGCACCTAATTTGCTTGGATCCTTCTTGCACTTGCAACTTGCAAAACAACCAAAGGAAATACTAGTAGCATCATCAAGCGAAGAAGGTCAGCTCAAAAGGGCGTTGTGTGCTTCGCCTCGCGAAATGAGAGTCGCATTGCTCCGGAGATGATGGTCGCCGGAGTAATCAGGAGCAACCAGGATGGCGGCGGCGGCGGCGGGACGGTGTCCGGTGCGGCGAGGATTAGCCCGGCGGTGGTGTTCGTCCTGGTGATATTGGCTGTGGTGCTGTTCGTGTCCGGGTTGCTGCATCTTCTTGTCAGATTCTTGCTCAGGCGCGGCCGTGGGCGAGATGGCGGCGGCGGCGGCGACGCGGAGGCGGCGGAGGGTGTGGAGGAGTCGGCGTTGCAACGGCAGCTGCAGCAGCTGTTCCACCTGCACGACGCCGGGCTGGACCAGGACGTCATCGACGCGCTCCCGGTGTTCATGTACCGGGAGG ] [+] EMBL CB646577 [ AGCACCTAATTTGCTTGGATCCTTCTTGCACTTGCAACTTGCAAAACAACCAAAGGAAATACTAGTAGCATCATCAAGCGAAGAAGGTCAGCTCAAAAGGGCGTTGTGTGCTTCGCCTCGCGAAATGAGAGTCGCATTGCTCCGGAGATGATGGTCGCCGGAGTAATCAGGAGCAACCAGGATGGCGGCGGCGGCGGCGGGACGGTGTCCGGTGCGGCGAGGATTAGCCCGGCGGTGGTGTTCGTCCTGGTGATATTGGCTGTGGTGCTGTTCGTGTCCGGGTTGCTGCATCTTCTTGTCAGATTCTTGCTCAGGCGCGGCCGTGGGCGAGATGGCGGCGGCGGCGGCGACGCGGAGGCGGCGGAGGGTGTGGAGGAGTCGGCGTTGCAACGGCAGCTGCAGCAGCTGTTCCACCTGCACGACGCCGGGCTGGACCAGGACGTCATCGACGCGCTCCCGGTGTTCATGTACCGGGAGG ] [-] EMBL CB647844 [ GGGAAGAAGATCGGCGCCGGCAGCAAGGGCGACAGCTTCTCGGTGTCCAAGATTTGGCAGTGGCCGCGGCAAGGCAAGGGGAAGCTGCCGGTGCTCGCCTCCGACGACTCGCCGGCGGTGGACGGCCGGCTGCCGTGGCCGAGGAGAAGCCCCGGGGCTTCCTGATGCTGATTTCCATGGTGTGTTTGCAATTTGCAAAACTTTTTCAGAGCTAATTCTGCTCATCTTTTTAACACCGTATTAATCAATCTGTTCATAGCCAATTCGTTCCATTCTACTTTTGCTGTTCGATTGCATCACCTCGTGTGTTCATGATGAACAAATAGCTTCATATAGAGGATTTCTTACTCTGCAGAATTAGTATTGGTAGTTGCAATACTAAACAAAAGAGGCTAAATTTATGAACAAAAATACTAGTTTATTTCCTATGGGCTATGGATATCCACCATTTGCAA] [-] EMBL CB646578 [ GGGAAGAAGATCGGCGCCGGCAGCAAGGGCGACAGCTTCTCGGTGTCCAAGATTTGGCAGTGGCCGCGGCAAGGCAAGGGGAAGCTGCCGGTGCTCGCCTCCGACGACTCGCCGGCGGTGGACGGCCGGCTGCCGTGGCCGAGGAGAAGCCCCGGGGCTTCCTGATGCTGATTTCCATGGTGTGTTTGCAATTTGCAAAACTTTTTCAGAGGTAATTCTGCTCATCTTTTTAACACCGTATTAATCAATCTGTTCATAGCCAATTCGTTCCATTCTACTTTTGCTGTTCGATTGCATCACCTCGTGTGTTCATGATGAACAAATAGCTTCATATAGAGGATTTCTTACTCTGCAGAATTAGTATTGGTAGTTGCAATACTAAACAAAAGAGGCTAAATTTATGAACAAAAATACTAGTTTATTTCCTATGGGC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||