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Oryza sativa
cluster # 8292 cluster # 8292       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8292#0 length = 1213 sequences # 5  

consensusID : consensus_8292#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1213
fasta sequence
                              [CGCCGCCGCAGCGTCCTCGCCTCCTCCTCCTCCTCCTCCTCCAATTCCTCCTCTTCCTCCCTCCACCTCGACCTCCGCCGCCCGTCCCACCGACATGGCCGGGGTCACCAGCAAGCGCCGATCCTCCTCCGCCTCCACCTCCTCCTCCTCCGGCGACGGCGCCGCCGTCTCCGACCGGCCGCGGGGGGTGACCCGGAAGCGCAGGTCCGGCGGCCGTTGCCCCCGCCCCGCCGCCTCCCTGAGGCCGGCCGCGCCCCGACCCTCCTCTCACCACACTGCTGGATTGAGAGTAATTCTGCAAAAGGAACTACGGTACAGCGACGTAAGCCAGCTAGGGAGAATTGTTCTCCCGAAGAAAGAGGCAGAGGCTTACCTACCAATTCTGACATCAAAGGATGGCAAGAAAAGTTTATGTATGCATGATTTGCAAAATGCACAACTCTGGACCTTCAAGTACAGGTATTGGCCCAACAACAAGAGCAGGATGTATGTACTTGAGAATACCGGGGATTATGTCAGAACCCATGATCTTCAACTAGGAGACTCCATTGTGATATACAAAGATGATGAGAATAACCGATTTGTCATCGGAGCAAAGAAGGCAGGTGATCAACAAGCTGCCACTGTGCCACAAGTTGACGAGCATATCTCTACCCTCTTCCCCATTTTTCCAATTGCACAAGTCGATGACTATCTCTCTCCCATGGCACCACAAGTTGATATCTCTGCCTTC-GTGCCACATGCTGATGAGAACCATGAGATATTTGACGGGATACTGAATTCTCTGCCAGAGATACCAGTAGCCAATGTGAGGTATTCTGACTTCTTCGACCCATTCGATGATGGTATGGACATGGCAAACACTCTGAACGCCAACGCCAACCAGTCTGCTAGTCTGCATGTCACTGATGATAAGTCTGGGCATTCCTTGATTCCCAACCCAAAGTCTGGGCCTCACATGTGAGACTGACAGGGAAGTGGTATTTCATACCAT-GGTCAGTTTGTATGAAGCTCAGAAACCCCTTCCCTGGCGCCATTGTTGTACATCCAAATAATTGGTGTCCTTATTTTGACGCTGTATATGCTAACTGCTACATGCAGTTTTATGTGTAAAATATTTTGTTCACAACCCAACTGGAGGTTTAATCAGATGAAACATTGTAACTCTGTTCAGTTCAGCTCAGAAATGTAATTGTTTCTTTCAGTAAAAAAA]

[+] EMBL AK109920             [CGCCGCCGCAGCGTCCTCGCCTCCTCCTCCTCCTCCTCCTCCAATTCCTCCTCTTCCTCCCTCCACCTCGACCTCCGCCGCCCGTCCCACCGACATGGCCGGGGTCACCAGCAAGCGCCGATCCTCCTCCGCCTCCACCTCCTCCTCCTCCGGCGACGGCGCCGCCGTCTCCGACCGGCCGCGGGGGGTGACCCGGAAGCGCAGGTCCGGCGGCCGTTGCCCCCGCCCCGCCGCCTCCCTGAGGCCGGCCGCGCCCCGACCCTCCTCTCACCACACTGCTGGATTGAGAGTAATTCTGCAAAAGGAACTACGGTACAGCGACGTAAGCCAGCTAGGGAGAATTGTTCTCCCGAAGAAAGAGGCAGAGGCTTACCTACCAATTCTGACATCAAAGGATGGCAAGAAAAGTTTATGTATGCATGATTTGCAAAATGCACAACTCTGGACCTTCAAGTACAGGTATTGGCCCAACAACAAGAGCAGGATGTATGTACTTGAGAATACCGGGGATTATGTCAGAACCCATGATCTTCAACTAGGAGACTCCATTGTGATATACAAAGATGATGAGAATAACCGATTTGTCATCGGAGCAAAGAAGGCAGGTGATCAACAAGCTGCCACTGTGCCACAAGTTGACGAGCATATCTCTACCCTCTTCCCCATTTTTCCAATTGCACAAGTCGATGACTATCTCTCTCCCATGGCACCACAAGTTGATATCTCTGCCTTC GTGCCACATGCTGATGAGAACCATGAGATATTTGACGGGATACTGAATTCTCTGCCAGAGATACCAGTAGCCAATGTGAGGTATTCTGACTTCTTCGACCCATTCGATGATGGTATGGACATGGCAAACACTCTGAACGCCAACGCCAACCAGTCTGCTAGTCTGCATGTCACTGATGATAAGTCTGGGCATTCCTTGATTCCCAACCCAAAGTCTGGGCCTCACATGTGAGACTGACAGGGAAGTGGTATTTCATACCAT GGTCAGTTTGTATGAAGCTCAGAAACCCCTTCCCTGGCGCCATTGTTGTACATCCAAATAATTGGTGTCCTTATTTTGACGCTGTATATGCTAACTGCTACATGCAGTTTTATGTGTAAAATATTTTGTTCACAACCCAACTGGAGGTTTAATCAGATGAAAC                                                        ]
[+] EMBL OS1235A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGGCAGGTGATCAACAAGCTGCCACTGTGCCACAAGTTGACGAGCATATCTCTACCCTCTTCCCCATTTTTCCAATTGCACAAGTCGATGACTATCTCTCTCCCATGGCACCACAAGTTGATATCTCTGCCTTC GTGCCACATGCTGATGAGAACCATGAGATATTTGACGGGATACTGAATTCTCTGCCAGAGATACCAGTAGCCAATGTGAGGTATTCTGACTTCTTCGACCCATTCGATGATGGTATGGACATGGCAAACACTCTGAACGNCAACGNCAACCAGTCTGCTAGTCTGCATGTCACTGAT                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C97812               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGTCGATGACTATCTCTCTCCCATGGCACCACAAGTTGATATCTCTGCCTTC GTGCCACATGCTGATGAGAACCATGAGATATTTNACGGGATACTGAATTCTCTGCCAGAGATACCAGTAGCCAATGTNAGGTATTCTNACTTCTTCGACCCATTCGATGATGGTATGGACATGGCAAACACTCTGAACGCCAACGCCAACCAGTCTGCTAGTCTGCATGTNACTGATGATAAGTCTGGGCATTCCTTGATTCCCAACCCAAAGTCTGGGCCTCANATGTGAGACTGACAGGGAAGTGGTATTTAATACCATGGGTCAGTTTGTATGAAGCTCA                                                                                                                                                                                                      ]
[+] EMBL AU161464             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTCGATGACTATCTCTCTCCCATGGCACCACAAGTTGATATCTCTGCCTTCGGTGCCACATGCTGATGAGAACCATGAGATATTTGACGGGATACTGAATTCTCTGCCAGAGATACCAGTAGCCAATGTGAGGTATTCTGACTTCTTCGACCCATTCGATGATGGTATGGACATGGCAAACACTCTGAACGCCAACGCCAACCAGTCTGCTAGTCTGCATGTCACTGATGATAAGTCTGGGCATTCCTTGATTCCCAACCCAAAGTCTGGGCCTCACATGTGAGACTGACAGGGAAGTGGTATTTCATACCAT GGTCAGTTTGTATGAAGCTCAGAAACCCCTTCCCTGGCGCCATTGTTGTACATCCAAATAATTGGTGTCCTTATTTTGACGCTGTATATGCTAACTGCTACATGCAGTTTTATGTGTAAAATATTTTGTTCACAACCCAACTGGAGGTTTAATCAGATGAAACATTGTAACTCTGTTCAGTTCAGCTCAGAAATGTAATTGTTTCTTTCAGTAAAAAAA]
[+] EMBL AU093152             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTCGATGACTATCTCTCTCCCATGGCACCACAAGTTGATATCTCTGCCTTC GTGCCACATGCTGATGAGAACCATGAGATATTTGACGGGATACTGAATTCTCTGCCAGAGATACCAGTAGCCAATGTGAGGTATTCTGACTTCTTCGACCCATTCGATGATGGTATGGACATGGCAAACACTCTGAACGCCAACGCCAACCAGTCTGCTAGTCTGCATGTCACTGATGATAAGTCTGGGCATTCCTTGATTCCCAACCCAAAGTCTGGGCCTCACATGTGAGACTGACAGGGAAGTGGTATTTCATACCAT GGTCAGTTTGTATGAAGCTCAGAAACCCCTTCCCTGGCGCCATTGTTGTACATCCAAATAATTGGTGTCCTTATTTTGACGCTGTATATGCTAACTGCTACATGCAGTTTTATGTGTAAAATATTTTGTTCACAACCCAACTGGAGGTTTAATCAGATGAAACATTGTAACTCTGTTCAGTTCAGCTCAGAAATGTAATTGTTTCTTTCAGTAAAAAAA]


>consensus_8292#0 CGCCGCCGCAGCGTCCTCGCCTCCTCCTCCTCCTCCTCCTCCAATTCCTCCTCTTCCTCC CTCCACCTCGACCTCCGCCGCCCGTCCCACCGACATGGCCGGGGTCACCAGCAAGCGCCG ATCCTCCTCCGCCTCCACCTCCTCCTCCTCCGGCGACGGCGCCGCCGTCTCCGACCGGCC GCGGGGGGTGACCCGGAAGCGCAGGTCCGGCGGCCGTTGCCCCCGCCCCGCCGCCTCCCT GAGGCCGGCCGCGCCCCGACCCTCCTCTCACCACACTGCTGGATTGAGAGTAATTCTGCA AAAGGAACTACGGTACAGCGACGTAAGCCAGCTAGGGAGAATTGTTCTCCCGAAGAAAGA GGCAGAGGCTTACCTACCAATTCTGACATCAAAGGATGGCAAGAAAAGTTTATGTATGCA TGATTTGCAAAATGCACAACTCTGGACCTTCAAGTACAGGTATTGGCCCAACAACAAGAG CAGGATGTATGTACTTGAGAATACCGGGGATTATGTCAGAACCCATGATCTTCAACTAGG AGACTCCATTGTGATATACAAAGATGATGAGAATAACCGATTTGTCATCGGAGCAAAGAA GGCAGGTGATCAACAAGCTGCCACTGTGCCACAAGTTGACGAGCATATCTCTACCCTCTT CCCCATTTTTCCAATTGCACAAGTCGATGACTATCTCTCTCCCATGGCACCACAAGTTGA TATCTCTGCCTTCGTGCCACATGCTGATGAGAACCATGAGATATTTGACGGGATACTGAA TTCTCTGCCAGAGATACCAGTAGCCAATGTGAGGTATTCTGACTTCTTCGACCCATTCGA TGATGGTATGGACATGGCAAACACTCTGAACGCCAACGCCAACCAGTCTGCTAGTCTGCA TGTCACTGATGATAAGTCTGGGCATTCCTTGATTCCCAACCCAAAGTCTGGGCCTCACAT GTGAGACTGACAGGGAAGTGGTATTTCATACCATGGTCAGTTTGTATGAAGCTCAGAAAC CCCTTCCCTGGCGCCATTGTTGTACATCCAAATAATTGGTGTCCTTATTTTGACGCTGTA TATGCTAACTGCTACATGCAGTTTTATGTGTAAAATATTTTGTTCACAACCCAACTGGAG GTTTAATCAGATGAAACATTGTAACTCTGTTCAGTTCAGCTCAGAAATGTAATTGTTTCT TTCAGTAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)