These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8302#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2013 fasta sequence [TCCCCCCTCCGGACTGCTGCTTACCGTGTGCTCTCCCCCATTCCCCCACTCCCCCCTTCCGCGAGCAGGTTCGAGGTTTCGGTGGCCGAAAATGGCGGAATCGCCGGCTGATCGGAGCCCAATCTGAGCCTGGACGCGCAGATACCGCGCCTTCCTGGCCCGATCTCTCGAAACCCCTTGAAAAATCCGAGCCGAAATGGCGGCCACCGCCCCGATCGGGCTTGCGAAGCGCGATTCGGTGGTGCTCTGGCCTGGGGGTCTCGCGAGCTGCACTTATTGTGACTGAAAGTGTGGTCGGCTCTTTGCTGGTTGGTGTGGGCTTGGGTCGCGGAGAGAGTAAAGGGTTTGTGGCATGATCAGCGCTAGCGCTGTGGCGATGCGTGGGGAGATGGGTGGCGGTGGCGGCGGCGGCGATGAGGGAGAGCTGGAGGACGAGCTTGATGCCCTCCTCGGAACCGGTGGCGCTGGCGCGCGTCGGCGAGGTGAGGACGCGGGAGAGAGGGAACGGGAGCTCAACATGTTCAGGAGCGGGTCGGCGCCGCCGACTATAGAGGGTTCGCTGAACGCCATCAGCGGGCTGCTCCGCGGCGGTGGAGAGGCAGCCGTTACCGTTGCAGCGATTCCCGACGCTGAGACGTTGAACGGGCATGGTGGTCTCCTCTCGGAGGATGAGCTCCGGGCTGACCCGGCCTATCTATCCTACTACTACTCGCATGGCAATCTGAACCCAAGGTTGCCACCGCCGGTGCTATCCAAGGAGGACTGGCGGTCCACACAGAGACTGAAGGCGGGGGTGGTTGGAGGAATTGGTGACGGAAGGAAGGTATCGCCGGAGGAGACTGGACATGAGCCGACGGTGGGGAGGCCTGTGTTCTCGCAGAATGTTGGTTTTGATCAGGAGGAGGCTGCAAGGAATGATGTAGGTGGTGCTGCAGAGTGGGTGGATGGTGGAGGTGATGGGCTGATTGGTTTGTCGCTTGGGCGGCAGCGCAGCTTTGCTGATATCCTTCAGGACAATATTGGCCGCAGAACTCCTGCTTCAGAGCATCCCTCTCGTGCAGTTAGTCGCAATTCTTTTCTTGACAATCAGGAACTACTAAATTCTGCTGATAGCCAGTACTCCATGCATAATGATATTCTGGAAGCACAACGTGCTGTCGGAAATGTGCAAAATGTCAGTGGCCTTCCCAGTATTAATGCATCCGCATCTCAAACTTTTGCATCTGTTCTGGGTTCATCTATTTCAAGGAATGCCACACCAGATTCTCATTATGTCCCTAGGGTCCCTAGTCCTGGCCTTCCACCTGTCGGTGTTAGGATTAATTCTAATGAGAAGAAGCTGAATTGCTCATCATCATTCAACACTGCATCTTCAAAAGCAGTTGAGCCTGATGATATTTTAGCTGCAATATCAAACATGAACATGTCAAAAGATGGTACTTTGGGTGACAGTAACAGCATTAGTCAATCAAAGTTCCAAAGTGAGATAAGTGACCACCAGAATATTTCTCTTGATCCAAAAGCTCTCCAAGTTAATAAGAATCAGCATTCGCTGATGTTGGAAGCTGATACTGATTATTTGGGTATACCACCAATTTCACAACCTTCAAATCCTTCCTTTTCTGATATTAACAAGAATGTCTCAGGTTTAGCGAACATAAGAAATTCTACTAACACACGTATAGATGGACACGCGGAGATGCAAAGGTCTTCTACTTTGTCTACTCGGTCATATCAGAAGTCCCCAACATCTTCCAATGCGAGCCCAGGTGGTTCTCCTGCTCAACACCAGAATATTGACAATATAAATTCAGCCTTTTTGAACTATGGACTCGGTGGGTATCCACTCAGCCCGGGTTTGCCTTCTATGATGATGAACTGTATGGGCTCTGGCAATATGCCTCCTTTGTTCGAAAGTGCAGCTGCTGCATCTGCTATAGCTTCATTCGGGGCAGATTCGAGAAACCTTGGTAACAATATTTTGTCGTCACCTACCTTAAGTCTATCTGATGT] [+] EMBL AK099801 [TCCCCCCTCCGGACTGCTGCTTACCGTGTGCTCTCCCCCATTCCCCCACTCCCCCCTTCCGCGAGCAGGTTCGAGGTTTCGGTGGCCGAAAATGGCGGAATCGCCGGCTGATCGGAGCCCAATCTGAGCCTGGACGCGCAGATACCGCGCCTTCCTGGCCCGATCTCTCGAAACCCCTTGAAAAATCCGAGCCGAAATGGCGGCCACCGCCCCGATCGGGCTTGCGAAGCGCGATTCGGTGGTGCTCTGGCCTGGGGGTCTCGCGAGCTGCACTTATTGTGACTGAAAGTGTGGTCGGCTCTTTGCTGGTTGGTGTGGGCTTGGGTCGCGGAGAGAGTAAAGGGTTTGTGGCATGATCAGCGCTAGCGCTGTGGCGATGCGTGGGGAGATGGGTGGCGGTGGCGGCGGCGGCGATGAGGGAGAGCTGGAGGACGAGCTTGATGCCCTCCTCGGAACCGGTGGCGCTGGCGCGCGTCGGCGAGGTGAGGACGCGGGAGAGAGGGAACGGGAGCTCAACATGTTCAGGAGCGGGTCGGCGCCGCCGACTATAGAGGGTTCGCTGAACGCCATCAGCGGGCTGCTCCGCGGCGGTGGAGAGGCAGCCGTTACCGTTGCAGCGATTCCCGACGCTGAGACGTTGAACGGGCATGGTGGTCTCCTCTCGGAGGATGAGCTCCGGGCTGACCCGGCCTATCTATCCTACTACTACTCGCATGGCAATCTGAACCCAAGGTTGCCACCGCCGGTGCTATCCAAGGAGGACTGGCGGTCCACACAGAGACTGAAGGCGGGGGTGGTTGGAGGAATTGGTGACGGAAGGAAGGTATCGCCGGAGGAGACTGGACATGAGCCGACGGTGGGGAGGCCTGTGTTCTCGCAGAATGTTGGTTTTGATCAGGAGGAGGCTGCAAGGAATGATGTAGGTGGTGCTGCAGAGTGGGTGGATGGTGGAGGTGATGGGCTGATTGGTTTGTCGCTTGGGCGGCAGCGCAGCTTTGCTGATATCCTTCAGGACAATATTGGCCGCAGAACTCCTGCTTCAGAGCATCCCTCTCGTGCAGTTAGTCGCAATTCTTTTCTTGACAATCAGGAACTACTAAATTCTGCTGATAGCCAGTACTCCATGCATAATGATATTCTGGAAGCACAACGTGCTGTCGGAAATGTGCAAAATGTCAGTGGCCTTCCCAGTATTAATGCATCCGCATCTCAAACTTTTGCATCTGTTCTGGGTTCATCTATTTCAAGGAATGCCACACCAGATTCTCATTATGTCCCTAGGGTCCCTAGTCCTGGCCTTCCACCTGTCGGTGTTAGGATTAATTCTAATGAGAAGAAGCTGAATTGCTCATCATCATTCAACACTGCATCTTCAAAAGCAGTTGAGCCTGATGATATTTTAGCTGCAATATCAAACATGAACATGTCAAAAGATGGTACTTTGGGTGACAGTAACAGCATTAGTCAATCAAAGTTCCAAAGTGAGATAAGTGACCACCAGAATATTTCTCTTGATCCAAAAGCTCTCCAAGTTAATAAGAATCAGCATTCGCTGATGTTGGAAGCTGATACTGATTATTTGGGTATACCACCAATTTCACAACCTTCAAATCCTTCCTTTTCTGATATTAACAAGAATGTCTCAGGTTTAGCGAACATAAGAAATTCTACTAACACACGTATAGATGGACACGCGGAGATGCAAAGGTCTTCTACTTTGTCTACTCGGTCATATCAGAAGTCCCCAACATCTTCCAATGCGAGCCCAGGTGGTTCTCCTGCTCAACACCAGAATATTGACAATATAAATTCAGCCTTTTTGAACTATGGACTCGGTGGGTATCCACTCAGCCCGGGTTTGCCTTCTATGATGATGAACTGTATGGGCTCTGGCAATATGCCTCCTTTGTTCGAAAGTGCAGCTGCTGCATCTGCTATAGCTTCATTCGGGGCAGATTCGAGAAACCTTGGTAACAATATTTTGTCGTCACCTACCTTAAGTCTATCTGATGT] [+] EMBL AK102882 [ CCCTCCGGACTGCTGCTTACCGTGTGCTCTCCCCCATTCCCCCACTCCCCCCTTCCGCGAGCAGGTTCGAGGTTTCGGTGGCCGAAATTGGCGGAATCGCCGGCTGATCGGAGCCCAATCTGAGCCTGGACGCGCAGATACCGCGCCTTCCTGGCCCGATCTCTCGAAACCCCTTGAAAAATCCGAGCCGAAATGGCGGCCACCGCCCCGATCGGGCTTGCGAAGCGCGATTCGGTGGTGCTCTGGCCTGGGGGTCTCGCGAGCTGCACTTATTGTGACTGAAAGTGTGGTCGGCTCTTTGCTGGTTGGTGTGGGCTTGGGTCGCGGAGAGAGTAAAGGGTTTGTGGCATGATCAGCGCTAGCGCTGTGGCGATGCGTGGGGAGATGGGTGGCGGTGGCGGCGGCGGCGATGAGGGAGAGCTGGAGGACGAGCTTGATGCCCTCCTCGGAACCGGTGGCGCTGGCGCGCGTCGGCGAGGTGAGGACGCGGGAGAGAGGGAACGGGAGCTCAACATGTTCAGGAGCGGGTCGGCGCCGCCGACTATAGAGGGTTCGCTGAACGCCATCAGCGGGCTGCTCCGCGGCGGTGGAGAGGCAGCCGTTACCGTTGCAGCGATTCCCGACGCTGAGACGTTGAACGGGCATGGTGGTCTCCTCTCGGAGGATGAGCTCCGGGCTGACCCGGCCTATCTATCCTACTACTACTCGCATGGCAATCTGAACCCAAGGTTGCCACCGCCGGTGCTATCCAAGGAGGACTGGCGGTCCACACAGAGACTGAAGGCGGGGGTGGTTGGAGGAATTGGTGACGGAAGGAAGGTATCGCCGGAGGAGACTGGACATGAGCCGACGGTGGGGAGGCCTGTGTTCTCGCAGAATGTTGGTTTTGATCAGGAGGAGGCTGCAAGGAATGATGTAGGTGGTGCTGCAGAGTGGGTGGATGGTGGAGGTGATGGGCTGATTGGTTTGTCGCTTGGGCGGCAGCGCAGCTTTGCTGATATCCTTCAGGACAATATTGGCCGCAGAACTCCTGCTTCAGAGCATCCCTCTCGTGCAGTTAGTCGCAATTCTTTTCTTGACAATCAGGAACTACTAAATTCTGCTGATAGCCAGTACTCCATGCATAATGATATTCTGGAAGCACAACGTGCTGTCGGAAATGTGCAAAATGTCAGTGGCCTTCCCAGTATTAATGCATCCGCATCTCAAACTTTTGCATCTGTTCTGGGTTCATCTATTTCAAGGAATGCCACACCAGATTCTCATTATGTCCCTAGGGTCCCTAGTCCTGGCCTTCCACCTGTCGGTGTTAGGATTAATTCTAATGAGAAGAAGCTGAATTGCTCATCATCATTCAACACTGCATCTTCAAAAGCAGTTGAGCCTGATGATATTTTAGCTGCAATATCAAACATGAACATGTCAAAAGATGGTACTTTGGGTGACAGTAACAGCATTAGTCAATCAAAGTTCCAAAGTGAGATAAGTGACCACCAGAATATTTCTCTTGATCCAAAAGCTCTCCAAGTTAATAAGAATCAGCATTCGCTGATGTTGGAAGCTGATACTGATTATTTGGGTATACCACCAATTTCACAACCTTCAAATCCTTCCTTTTCTGATATTAACAAGAATGTCTCAGGTTTAGCGAACATAAGAAATTCTACTAACACACGTATAGATGGACACGCGGAGATGCAAAGGTCTTCTACTTTGTCTACTCGGTCATATCAGAAGTCCCCAACATCTTCCAATGCGAGCCCAGGTGGTTCTCCTGCTCAACACCAGAATATTGACAATATAAATTCAGCCTTTTTGAACTATGGACTCGGTGGGTATCCACTCAGCCCGGGTTTGCCTTCTATGATGATGAACTGTATGGGCTCTGGCAATATGCCTCCTTTGTTCGAAAGTGCAGCTGCTGCATCTGCTATAGCTTCATTCGGGGCAGATTCGAGAAACCTTGGTAACAATATTTTGTCGTCACCTACCTTAAGTCTATCTGATGT] [+] EMBL CB632687 [ GAGGCCTGTGTTCTCGCAGAATGTTGGTTTTGATCAGGAGGAGGCTGCAAGGAATGATGTAGGTGGTGCTGCAGAGTGGGTGGATGGTGGAGGTGATGGGCTGATTGGTTTGTCGCTTGGGCGGCAGCGCAGCTTTGCTGATATCCTTCAGGACAATATTGGCCGCAGAACTCCTGCTTCAGAGCATCCCTCTCGTGCAGTTAGTCGCAATTCTTTTCTTGACAATCAGGAACTACTAAATTCTGCTGATAGCCAGTACTCCATGCATAATGATATTCTAGAAGCACAACGTGCTGTCGGAAATGTGCAAAATGTCAGTGGCCTTCCCAGTATTAATGCATCCACATCTCAAACTTTTGCATCTGTTCTGGGTTCATCTATTTCAAGGAATGCCACACCAGATTCTCATTATGTCCCTAGGGTCCCTAGTCCTGGCCTTCCACCTGTCGGTGTTAGGATTAATTCTAATGAGAAGAAGCTGAATTGCTCATCATCATTCAACACTGCATCTTCAAAAGCAGTTGAGCCTGATGATATTTTAGCTGCAATATCAAACATGAACATGTCAAAAGATGGTACTTTGGGTGACAGTAACAGCATTAGTCAATCAAAGTTCCAAAGTGAGATAAGTGACCACCAGAATATTTCTCTTGATCCAAAAGCTCTCCAAGTTAATAAGAATCAGCATTCGCTGATGTTGGAAGCTGATACTGATTATTTGGGTATACCACCAATTTCAC ACCTTCAAATCCTTCCTTTT ] [+] EMBL CB627970 [ AGTACCCTATGCATAATGATATTCTAGAAGCACAACGTGCTGTCGGAAATGTGCAAAATGTCAGTGGCCTTCCCAGTATTAATGCATCCACATCTCAAACTTTTGCATCTGTTCTGGGTTCATCTATTTCAAGGAATGCCACACCAGATTCTCATTATGTCCCTAGGGTCCCTAGTCCTGGCCTTCCACCTGTCGGTGTTAGGATTAATTCTAATGAGAAGAAGCTGAATTGCTCATCATCATTCAACACTGCATCTTCAAAAGCAGTTGAGCCTGATGATATTTTAGCTGCAATATCAAACATGAACATGTCAAAAGATGGTACTTTGGGTGACAGTAACAGCATTAGTCAATCAAAGTTCCAAAGTGAGATAAGTGACCACCAGAATATTTCTCTTGATCCAAAAGCTCTCCAAGTTAATAAGAATCAGCATTCGCTGATGTTGGAAGCTGATACTGATTATTTGGGTATACCACCAATTTCACAACCTTCAAATCCTTCCTTTTCTGATATTAACAAGAATGTCTCAGGTTTAGCGAACATAAGAAATTCTACTAACACACGTATAGATGGACACGCGGAGATGCAAAGGTCTTCTACTTTGTCTACTCGGTCATATCAGAAGTCCCCAACATCTTCCAATGTGAGCCCAGGTGGTTCTCCTGCTCAACACCAGAATATTGACAATATAAATTCAGCCTTTTTGAACTATGGACTCGGTGGGTATCCACTCAGCCCGGGCTTGCCTTCTATGATGATGAACTGTATGGGCTCTGGCAATATGCCTCCTTTGNTCGAAAGTGCAGCTGC ] [+] EMBL CF304079 [ ATCATCATTCAACACTGCATCTTCAAAAGCAGTTGAGCCTGATGATATTTTAGCTGCAATATCAAACATGAACATGTCAAAAGATGGTACTTTGGGTGACAGTAACAGCATTAGTCAATCAAAGTTCCAAAGTGAGATAAGTGACCACCAGAATATTTCTCTTGATCCAAAAGCTCTCCAAGTTAATAAGAATCAGCATTCGCTGATGTTGGAAGCTGATACTGATTATTTGGGTATACCACCAATTTCACAACCTTCAAATCCTTCCTTTTCTGATATTAACAAGAATGTCTCAGGTTTAGCGAACATAAGAAATTCTACTAACACACGTATAGATGGACACGCGGAGATGCAAAGGTCTTCTACTTTGTCTACTCGGTCATATCAGAAGTCCCCAACATCTTCCAATGCGAGCCCAGGTGGTTCTCCTGCTCAACACCAGAATATTGACAATATAAATTCAGCCTTTTTGAACTATGGACTCGGTGGGTATCCACTCAGCCCCGGTTTGCCTTCTATGATGATGAACTGTATGGGCTCTGGCAATATGCCTCCTTTGTTCGAAAGTGCAGCTGCTGCATCTGCTATAGCTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||