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Oryza sativa
cluster # 8305 cluster # 8305       Sequences # 5       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8305#0 length = 1199 sequences # 2  
consensus_8305#1 length = 1040 sequences # 1  
consensus_8305#2 length = 591 sequences # 1  
consensus_8305#3 length = 408 sequences # 1  

consensusID : consensus_8305#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1199
fasta sequence
                              [TTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAAATAATCCAAGGTCAGCCACACCCTTAATACATACAGTATGTAAAATCTGAGTTTGTGGCCGCTCCGCTAGCAAGGCCTCATCCATGTGGATTCTGGAGAGCCCGCTGCTCCGGGACGCCGGCGCCGCCGTGCTCACCGGAGCCACCGCCCTCGCCGTGCTTCGTTTCTGGGAAGAGGTCGGCAACCGCGCCCTCTTGGACCAGAAACTCTGCAGGAAACTCGTGCATATTACTGTTGGCTTAGTATACTTCCTTATGTGGCCTTTGTTCAGTGCGGATGATGTCTATGCTCCATTTCTTGCTTCCCTTGTCATTGCATTCAACATCATAAAGGTTACCTTGATTGGACTTGGTATTGTCAAAGATGATGGCGTCATTAACTCCATGACCAGGAACGGAGACCGCAGAGAGCTTCTTAAAGGTCCACTGTACTACGCTTGTGCTATAACACTCGCTACTGTAATTTTCTGGAGGACATCTCCCATTTCAATCGCAGTGATTTGCAACTTGTGTGCCGGAGATGGTGTAGCTGACATAGCTGGAAGGCGATTCGGACATGTAAAGCTTCCTTACAACCCTGATAAGTCTTATGCTGGATCCATTGCAATGTTCTTAGCTGGTTTCCTTGCATCAATCCTGTACATGTGCTACTTCCACCTCTTTGGATTTGTCGAGGAGAGCTGGAGCATGGTGATCGCCTTTGGTGTGACATCGCTTGCTGCTGCAATTGTGGAGTCACTCCCTATCAGCACACGCCTGGACGACAATCTGACTGTGCCACTCGCCTCTGTCCTCGTTGGTGTCCTTGTTTTCTATTATACTGGGGCCAGAAACCTGTGTTGTATGAGCGCTGACAGCAGTGACATTTCTGCACTTGTGCAGAATCAGATGGTCTTGGACAGGTTCTAGTGACTACTGACTAGTAAGTAGCTGCCCTGCAGAGCTGAAAAGAAACTGATTTACTAATATCAGATTTGATTAATGTAACAAGGATCGATACAAGCTACAAGCATCATAGTTGTATCTTGTAATCAAGAAAAACAAAAGCTATCTGATATACTAGTAAGGCAAAAGTTGAGTAGAGGAAAAACATACCAGAGAGCTG]

[+] EMBL AK110748             [TTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAAATAATCCAAGGTCAGCCACACCCTTAATACATACAGTATGTAAAATCTGAGTTTGTGGCCGCTCCGCTAGCAAGGCCTCATCCATGTGGATTCTGGAGAGCCCGCTGCTCCGGGACGCCGGCGCCGCCGTGCTCACCGGAGCCACCGCCCTCGCCGTGCTTCGTTTCTGGGAAGAGGTCGGCAACCGCGCCCTCTTGGACCAGAAACTCTGCAGGAAACTCGTGCATATTACTGTTGGCTTAGTATACTTCCTTATGTGGCCTTTGTTCAGTGCGGATGATGTCTATGCTCCATTTCTTGCTTCCCTTGTCATTGCATTCAACATCATAAAGGTTACCTTGATTGGACTTGGTATTGTCAAAGATGATGGCGTCATTAACTCCATGACCAGGAACGGAGACCGCAGAGAGCTTCTTAAAGGTCCACTGTACTACGCTTGTGCTATAACACTCGCTACTGTAATTTTCTGGAGGACATCTCCCATTTCAATCGCAGTGATTTGCAACTTGTGTGCCGGAGATGGTGTAGCTGACATAGCTGGAAGGCGATTCGGACATGTAAAGCTTCCTTACAACCCTGATAAGTCTTATGCTGGATCCATTGCAATGTTCTTAGCTGGTTTCCTTGCATCAATCCTGTACATGTGCTACTTCCACCTCTTTGGATTTGTCGAGGAGAGCTGGAGCATGGTGATCGCCTTTGGTGTGACATCGCTTGCTGCTGCAATTGTGGAGTCACTCCCTATCAGCACACGCCTGGACGACAATCTGACTGTGCCACTCGCCTCTGTCCTCGTTGGTGTCCTTGTTTTCTATTATACTGGGGCCAGAAACCTGTGTTGTATGAGCGCTGACAGCAGTGACATTTCTGCACTTGTGCAGAATCAGATGGTCTTGGACAGGTTCTAGTGACTACTGACTAGTAAGTAGCTGCCCTGCAGAGCTGAAAAGAAACTGATTTACTAATATCAGATTTGATTAATGTAACAAGGATCGATACAAGCTACAAGCATCATAGTTGTATCTTGTAATCAAGAAAAACAAAAGCTATCTGATATACTAGTAAGGCAAAAGTTGAGTAGAGGAAAAACATACCAGAGAGCTG]
[+] EMBL CF336284             [                                                                                                                                                               CGCTAGCAAGGCCTCATCCATGTGGATTCTGGAGAGCCCGCTGCTCC GGACGCCGG GCCG CGTGCTCACCGGA CC CCG CCTC CCG GCTTCG TTCTGGNAAGAGGTCGGCAACCGCGCCCTCTTGGACCAGAAACTCTGCAGGAAACTCGTGCATATTACTGTTGGCTTAGTATACTTCCTTATGTGGCCTTTGTTCAGTGCGGATGATGTCTATGCTCCATTTCTTGCTTCCCTTGTCATTGCATTCAACATCATAAAGGTTACCTTGATTGGACTTGGTATTGTCAAAGATGATGGCGTCATTAACTCCATGACCAGGAACGGAGACCGCAGAGAGCTTCTTAAAGGTCCACTGTACTACGCTTGTGCTATAACACTCGCTACTGTAATTTTCTGGAGGACATCTCCCATTTCAATCGCAGTGATTTGCAACTTGTGTGCCGGAGATGGTGTAGCTGACATAGCTGGAAGGCGATTCGGACATGTAAAGCTTCCTTACAACCCTGATAAGTCTTATGCTGGATCCATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]


>consensus_8305#0 TTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGA TTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAAATAATCCAAGGTCAGCCACACCCTT AATACATACAGTATGTAAAATCTGAGTTTGTGGCCGCTCCGCTAGCAAGGCCTCATCCAT GTGGATTCTGGAGAGCCCGCTGCTCCGGGACGCCGGCGCCGCCGTGCTCACCGGAGCCAC CGCCCTCGCCGTGCTTCGTTTCTGGGAAGAGGTCGGCAACCGCGCCCTCTTGGACCAGAA ACTCTGCAGGAAACTCGTGCATATTACTGTTGGCTTAGTATACTTCCTTATGTGGCCTTT GTTCAGTGCGGATGATGTCTATGCTCCATTTCTTGCTTCCCTTGTCATTGCATTCAACAT CATAAAGGTTACCTTGATTGGACTTGGTATTGTCAAAGATGATGGCGTCATTAACTCCAT GACCAGGAACGGAGACCGCAGAGAGCTTCTTAAAGGTCCACTGTACTACGCTTGTGCTAT AACACTCGCTACTGTAATTTTCTGGAGGACATCTCCCATTTCAATCGCAGTGATTTGCAA CTTGTGTGCCGGAGATGGTGTAGCTGACATAGCTGGAAGGCGATTCGGACATGTAAAGCT TCCTTACAACCCTGATAAGTCTTATGCTGGATCCATTGCAATGTTCTTAGCTGGTTTCCT TGCATCAATCCTGTACATGTGCTACTTCCACCTCTTTGGATTTGTCGAGGAGAGCTGGAG CATGGTGATCGCCTTTGGTGTGACATCGCTTGCTGCTGCAATTGTGGAGTCACTCCCTAT CAGCACACGCCTGGACGACAATCTGACTGTGCCACTCGCCTCTGTCCTCGTTGGTGTCCT TGTTTTCTATTATACTGGGGCCAGAAACCTGTGTTGTATGAGCGCTGACAGCAGTGACAT TTCTGCACTTGTGCAGAATCAGATGGTCTTGGACAGGTTCTAGTGACTACTGACTAGTAA GTAGCTGCCCTGCAGAGCTGAAAAGAAACTGATTTACTAATATCAGATTTGATTAATGTA ACAAGGATCGATACAAGCTACAAGCATCATAGTTGTATCTTGTAATCAAGAAAAACAAAA GCTATCTGATATACTAGTAAGGCAAAAGTTGAGTAGAGGAAAAACATACCAGAGAGCTG



consensusID : consensus_8305#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1040
fasta sequence
                              [AGAGAAGCATTGATTCACCCATGGAGAGTCAGGTGCTCCGGGACGCCGGCGCCGCCGTGCTCACCGGAGCCACCGCGCTCGCCGTGCTTCGCTTCTGGGAAGAGGTCGGCAACCGCGCCCTCTTGGACCAGAAACTTTGCAGGAAACTCGTGCACATTACTGTTGGCTTAGTATACTTCCTCATGTGGCCTTTGTTCAGTGCGGATGATGTCTATGCTCCATTTCTTGCTTCCATTGTCATTGCATTCAACATCATAAAGGTTACCTTGATTGGACTTGGTATTGTCAAAGATGATGGTGTCATTAACTCCATGACCAGGAACGGAGACCCTAGAGAGCTTCTTAAAGGACCACTGTACTACGCTTGTGCTATGACTCTCGCTACTGTTATTTTCTGGAGGACATCTCCCATTTCAATCGCTGTGATTTGCAACTTGTGTGCCGGAGACGGTGTAGCTGACATAGCTGGAAGGCAGTTAGGCCGTATAAAGCTTCCTTACAACCCTGACAAATCTTACGCTGGATCCATTGCAATGTTCTTAGCTGGTTTCCTTGCATCAATCCTGTACATGTGCTACTTCCACCTCTTCGGATTTGTCGAGGAGAGCTGGACCATGGTGATTGCCTTTGGCGTGACATCGCTTTCTGCTGCAATTGTGGAGTCGCTCTCTATCAGCACACGCTTGGACGACAATCTGACTGTGCCACTCGCCTCTGTCCTCATTGGTGTCCTTGTTTTCTATTATATTGGGGCCAGAAACCTGTGCTGCATGAGCGCTGACAGCAGCGATATTTCTGCACTTGTTCAGAATCAGATGTTCTTGGGCAGGTTCTAGTGAGTAGCCGCCTTGCAGAGCTCAAAAACAACCGACTTACTAAAATCAGATTCGATTAGATGTAACAACGATGGATACAGGCTGCAAGAATCATAATTTTGTGATTGTATCTTGTGATCAAGGAAAACAAAAAGTATCTGACTGTCTGATATTAGTAAAGCAAAACTCGAGGAGAGGAAAAACACACCAGATAGCAATCTTCAC]

[+] EMBL AK109049             [AGAGAAGCATTGATTCACCCATGGAGAGTCAGGTGCTCCGGGACGCCGGCGCCGCCGTGCTCACCGGAGCCACCGCGCTCGCCGTGCTTCGCTTCTGGGAAGAGGTCGGCAACCGCGCCCTCTTGGACCAGAAACTTTGCAGGAAACTCGTGCACATTACTGTTGGCTTAGTATACTTCCTCATGTGGCCTTTGTTCAGTGCGGATGATGTCTATGCTCCATTTCTTGCTTCCATTGTCATTGCATTCAACATCATAAAGGTTACCTTGATTGGACTTGGTATTGTCAAAGATGATGGTGTCATTAACTCCATGACCAGGAACGGAGACCCTAGAGAGCTTCTTAAAGGACCACTGTACTACGCTTGTGCTATGACTCTCGCTACTGTTATTTTCTGGAGGACATCTCCCATTTCAATCGCTGTGATTTGCAACTTGTGTGCCGGAGACGGTGTAGCTGACATAGCTGGAAGGCAGTTAGGCCGTATAAAGCTTCCTTACAACCCTGACAAATCTTACGCTGGATCCATTGCAATGTTCTTAGCTGGTTTCCTTGCATCAATCCTGTACATGTGCTACTTCCACCTCTTCGGATTTGTCGAGGAGAGCTGGACCATGGTGATTGCCTTTGGCGTGACATCGCTTTCTGCTGCAATTGTGGAGTCGCTCTCTATCAGCACACGCTTGGACGACAATCTGACTGTGCCACTCGCCTCTGTCCTCATTGGTGTCCTTGTTTTCTATTATATTGGGGCCAGAAACCTGTGCTGCATGAGCGCTGACAGCAGCGATATTTCTGCACTTGTTCAGAATCAGATGTTCTTGGGCAGGTTCTAGTGAGTAGCCGCCTTGCAGAGCTCAAAAACAACCGACTTACTAAAATCAGATTCGATTAGATGTAACAACGATGGATACAGGCTGCAAGAATCATAATTTTGTGATTGTATCTTGTGATCAAGGAAAACAAAAAGTATCTGACTGTCTGATATTAGTAAAGCAAAACTCGAGGAGAGGAAAAACACACCAGATAGCAATCTTCAC]


>consensus_8305#1 AGAGAAGCATTGATTCACCCATGGAGAGTCAGGTGCTCCGGGACGCCGGCGCCGCCGTGC TCACCGGAGCCACCGCGCTCGCCGTGCTTCGCTTCTGGGAAGAGGTCGGCAACCGCGCCC TCTTGGACCAGAAACTTTGCAGGAAACTCGTGCACATTACTGTTGGCTTAGTATACTTCC TCATGTGGCCTTTGTTCAGTGCGGATGATGTCTATGCTCCATTTCTTGCTTCCATTGTCA TTGCATTCAACATCATAAAGGTTACCTTGATTGGACTTGGTATTGTCAAAGATGATGGTG TCATTAACTCCATGACCAGGAACGGAGACCCTAGAGAGCTTCTTAAAGGACCACTGTACT ACGCTTGTGCTATGACTCTCGCTACTGTTATTTTCTGGAGGACATCTCCCATTTCAATCG CTGTGATTTGCAACTTGTGTGCCGGAGACGGTGTAGCTGACATAGCTGGAAGGCAGTTAG GCCGTATAAAGCTTCCTTACAACCCTGACAAATCTTACGCTGGATCCATTGCAATGTTCT TAGCTGGTTTCCTTGCATCAATCCTGTACATGTGCTACTTCCACCTCTTCGGATTTGTCG AGGAGAGCTGGACCATGGTGATTGCCTTTGGCGTGACATCGCTTTCTGCTGCAATTGTGG AGTCGCTCTCTATCAGCACACGCTTGGACGACAATCTGACTGTGCCACTCGCCTCTGTCC TCATTGGTGTCCTTGTTTTCTATTATATTGGGGCCAGAAACCTGTGCTGCATGAGCGCTG ACAGCAGCGATATTTCTGCACTTGTTCAGAATCAGATGTTCTTGGGCAGGTTCTAGTGAG TAGCCGCCTTGCAGAGCTCAAAAACAACCGACTTACTAAAATCAGATTCGATTAGATGTA ACAACGATGGATACAGGCTGCAAGAATCATAATTTTGTGATTGTATCTTGTGATCAAGGA AAACAAAAAGTATCTGACTGTCTGATATTAGTAAAGCAAAACTCGAGGAGAGGAAAAACA CACCAGATAGCAATCTTCAC



consensusID : consensus_8305#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 591
fasta sequence
                              [AAAATCTGAGTTTGTGGCCGCTCCGCTAGCAAGGCCTCATCCATGTGGATTCTGGAGAGCCCGCTGCTCCGGGACGCCGGCGCCGCCGTGCTCACCGGAGCCACCGCCCTCGCCGTGCTTCGTTTCTGGGAAGAGGTCGGCAACCGCGCCCTCTTGGACCAGGTCACCTCACCTCTTCTTCCTTCACCTACTCTCTTAACGGTTGCTCACTTCAGCTCTCTGTAGCATGATATGACTAGTGTGTTTAGATCCCTATTAGCTGCCGGCAAATTTCCATAAGCACACCATTAATTTGTTGGTTAATTGAGGTGNTTTGTGTCAGATCCTGTGTTAGTCACATCACATATATACTGCAGCATGTCTTTCCGCAGCAATTATGCTGATTCTTGNACTGGTATGTCGGGCTTGTCCATCTTCAGAAACTCTGCAGGAAACTCGTGCATATTACTGTTGGCTTAGTATACTTCCTTATGTGGCCTTTGTTCAGGTAAACCAGATCGATCGAGTTCCAGACCAACAATATACTAGCAGTATCTTTAATTTTGTCATGTCATAGCCATACCAAGTGTGTTTCTGCCTTCCTGACAACGT]

[+] EMBL CF323945             [AAAATCTGAGTTTGTGGCCGCTCCGCTAGCAAGGCCTCATCCATGTGGATTCTGGAGAGCCCGCTGCTCCGGGACGCCGGCGCCGCCGTGCTCACCGGAGCCACCGCCCTCGCCGTGCTTCGTTTCTGGGAAGAGGTCGGCAACCGCGCCCTCTTGGACCAGGTCACCTCACCTCTTCTTCCTTCACCTACTCTCTTAACGGTTGCTCACTTCAGCTCTCTGTAGCATGATATGACTAGTGTGTTTAGATCCCTATTAGCTGCCGGCAAATTTCCATAAGCACACCATTAATTTGTTGGTTAATTGAGGTGNTTTGTGTCAGATCCTGTGTTAGTCACATCACATATATACTGCAGCATGTCTTTCCGCAGCAATTATGCTGATTCTTGNACTGGTATGTCGGGCTTGTCCATCTTCAGAAACTCTGCAGGAAACTCGTGCATATTACTGTTGGCTTAGTATACTTCCTTATGTGGCCTTTGTTCAGGTAAACCAGATCGATCGAGTTCCAGACCAACAATATACTAGCAGTATCTTTAATTTTGTCATGTCATAGCCATACCAAGTGTGTTTCTGCCTTCCTGACAACGT]


>consensus_8305#2 AAAATCTGAGTTTGTGGCCGCTCCGCTAGCAAGGCCTCATCCATGTGGATTCTGGAGAGC CCGCTGCTCCGGGACGCCGGCGCCGCCGTGCTCACCGGAGCCACCGCCCTCGCCGTGCTT CGTTTCTGGGAAGAGGTCGGCAACCGCGCCCTCTTGGACCAGGTCACCTCACCTCTTCTT CCTTCACCTACTCTCTTAACGGTTGCTCACTTCAGCTCTCTGTAGCATGATATGACTAGT GTGTTTAGATCCCTATTAGCTGCCGGCAAATTTCCATAAGCACACCATTAATTTGTTGGT TAATTGAGGTGNTTTGTGTCAGATCCTGTGTTAGTCACATCACATATATACTGCAGCATG TCTTTCCGCAGCAATTATGCTGATTCTTGNACTGGTATGTCGGGCTTGTCCATCTTCAGA AACTCTGCAGGAAACTCGTGCATATTACTGTTGGCTTAGTATACTTCCTTATGTGGCCTT TGTTCAGGTAAACCAGATCGATCGAGTTCCAGACCAACAATATACTAGCAGTATCTTTAA TTTTGTCATGTCATAGCCATACCAAGTGTGTTTCTGCCTTCCTGACAACGT



consensusID : consensus_8305#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 408
fasta sequence
                              [ATTCGGCACGNGCTCGTGCCGAATTCGGCACGACGCCTTTGGTGTGACATCGCTTGCTGCTGCAATTGTGGAGTCACTCCCTATCAGCACACGCCTGGACGACAATCTGACTGTGCCACTCGCCTCTGTCCTCGTTGGTGTCCTTGTTTTCTATTATACTGGGGCCAGAAACCTGTGTTGTATGAGCGCTGACAGCAGTGACATTTCTGCACTTGTGCAGAATCAGATGGTCTTGGACAGGTTCTAGTGACTACTGACTANTAAGTAGCTGCCCTGCAGAGCTGAAAAGAAACTGATTTACTAATATCAGATTTGATTAATGTNACAAGGATCGATACNAGCTACAAGCATCATAGTTGTATCTTGTAATCAAGAAAAACAAAAGCTATCTGATATACTNGTAAGGCA]

[+] EMBL BE228348             [ATTCGGCACGNGCTCGTGCCGAATTCGGCACGACGCCTTTGGTGTGACATCGCTTGCTGCTGCAATTGTGGAGTCACTCCCTATCAGCACACGCCTGGACGACAATCTGACTGTGCCACTCGCCTCTGTCCTCGTTGGTGTCCTTGTTTTCTATTATACTGGGGCCAGAAACCTGTGTTGTATGAGCGCTGACAGCAGTGACATTTCTGCACTTGTGCAGAATCAGATGGTCTTGGACAGGTTCTAGTGACTACTGACTANTAAGTAGCTGCCCTGCAGAGCTGAAAAGAAACTGATTTACTAATATCAGATTTGATTAATGTNACAAGGATCGATACNAGCTACAAGCATCATAGTTGTATCTTGTAATCAAGAAAAACAAAAGCTATCTGATATACTNGTAAGGCA]


>consensus_8305#3 ATTCGGCACGNGCTCGTGCCGAATTCGGCACGACGCCTTTGGTGTGACATCGCTTGCTGC TGCAATTGTGGAGTCACTCCCTATCAGCACACGCCTGGACGACAATCTGACTGTGCCACT CGCCTCTGTCCTCGTTGGTGTCCTTGTTTTCTATTATACTGGGGCCAGAAACCTGTGTTG TATGAGCGCTGACAGCAGTGACATTTCTGCACTTGTGCAGAATCAGATGGTCTTGGACAG GTTCTAGTGACTACTGACTANTAAGTAGCTGCCCTGCAGAGCTGAAAAGAAACTGATTTA CTAATATCAGATTTGATTAATGTNACAAGGATCGATACNAGCTACAAGCATCATAGTTGT ATCTTGTAATCAAGAAAAACAAAAGCTATCTGATATACTNGTAAGGCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8305#0      TTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGA 60
consensus_8305#3      ------------------------------------------------------------
consensus_8305#1      ------------------------------------------------------------
consensus_8305#2      ------------------------------------------------------------
                                                                                  

consensus_8305#0      TTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAAATAATCCAAGGTCAGCCACACCCTT 120
consensus_8305#3      ------------------------------------------------------------
consensus_8305#1      ------------------------------------------------------------
consensus_8305#2      ------------------------------------------------------------
                                                                                  

consensus_8305#0      AATACATACAGTATGTAAAATCTGAGTTTGTGGCCGCTCCGCTAGCAAGGCCTCATCCAT 180
consensus_8305#3      ------------------------------------------------------------
consensus_8305#1      -----------------------------------------------AGAGAAGCATTGA 13
consensus_8305#2      ------------------------------------------------------------
                                                                                  

consensus_8305#0      GTGGATTCTGGAGAGCCCGCTGCTCCGGGACGCCGGCGCCGCCGTGCTCACCGGAGCCAC 240
consensus_8305#3      ------------------------------------------------------------
consensus_8305#1      TTCACCCATGGAGAGTCAGGTGCTCCGGGACGCCGGCGCCGCCGTGCTCACCGGAGCCAC 73
consensus_8305#2      ------------------------------------------------------------
                                                                                  

consensus_8305#0      CGCCCTCGCCGTGCTTCGTTTCTGGGAAGAGGTCGGCAACCGCGCCCTCTTGGACCAGAA 300
consensus_8305#3      ------------------------------------------------------------
consensus_8305#1      CGCGCTCGCCGTGCTTCGCTTCTGGGAAGAGGTCGGCAACCGCGCCCTCTTGGACCAGAA 133
consensus_8305#2      ------------------------------------------------------------
                                                                                  

consensus_8305#0      ACTCTGCAGGAAACTCGTGCATATTACTGTTGGCTTAGTATACTTCCTTATGTGGCCTTT 360
consensus_8305#3      ------------------------------------------------------------
consensus_8305#1      ACTTTGCAGGAAACTCGTGCACATTACTGTTGGCTTAGTATACTTCCTCATGTGGCCTTT 193
consensus_8305#2      ------------------------------------------------------------
                                                                                  

consensus_8305#0      GTTCAGTGCGGATGATGTCTATGCTCCATTTCTTGCTTCCCTTGTCATTGCATTCAACAT 420
consensus_8305#3      ------------------------------------------------------------
consensus_8305#1      GTTCAGTGCGGATGATGTCTATGCTCCATTTCTTGCTTCCATTGTCATTGCATTCAACAT 253
consensus_8305#2      ------------------------------------------------------------
                                                                                  

consensus_8305#0      CATAAAGGTTACCTTGATTGGACTTGGTATTGTCAAAGATGATGGCGTCATTAACTCCAT 480
consensus_8305#3      ------------------------------------------------------------
consensus_8305#1      CATAAAGGTTACCTTGATTGGACTTGGTATTGTCAAAGATGATGGTGTCATTAACTCCAT 313
consensus_8305#2      ------------------------------------------------------------
                                                                                  

consensus_8305#0      GACCAGGAACGGAGACCGCAGAGAGCTTCTTAAAGGTCCACTGTACTACGCTTGTGCTAT 540
consensus_8305#3      ------------------------------------------------------------
consensus_8305#1      GACCAGGAACGGAGACCCTAGAGAGCTTCTTAAAGGACCACTGTACTACGCTTGTGCTAT 373
consensus_8305#2      ------------------------------------------------------------
                                                                                  

consensus_8305#0      AACACTCGCTACTGTAATTTTCTGGAGGACATCTCCCATTTCAATCGCAGTGATTT---- 596
consensus_8305#3      ------------------------------------------------------------
consensus_8305#1      GACTCTCGCTACTGTTATTTTCTGGAGGACATCTCCCATTTCAATCGCTGTGATTT---- 429
consensus_8305#2      ---------------------------AAAATCTGAGTTTGTGGCCGCTCCGCTAGCAAG 33
                                                                                  

consensus_8305#0      GCAACTTGTGTGCCGGAGATGGTGTAGCTGACATAGCTGGAAGGCGATTCGGACATGTAA 656
consensus_8305#3      ------------------------------------------------------------
consensus_8305#1      GCAACTTGTGTGCCGGAGACGGTGTAGCTGACATAGCTGGAAGGCAGTTAGGCCGTATAA 489
consensus_8305#2      GCCTCATCCATGTGGATTCTGGAGAGCCCGCTGCTCCGGGACGCCGGCGCCGCCGTGCTC 93
                                                                                  

consensus_8305#0      AGCTTCCTTACAACCCTGATAAGTCTTATGCTGGATCCATTGCAATGTTCTTAGCTG-GT 715
consensus_8305#3      ------------------------------------------------------------
consensus_8305#1      AGCTTCCTTACAACCCTGACAAATCTTACGCTGGATCCATTGCAATGTTCTTAGCTG-GT 548
consensus_8305#2      ACCGGAGCCACCGCCCTCGC----CGTGCTTCGTTTCTGGGAAGAGGTCGGCAACCGCGC 149
                                                                                  

consensus_8305#0      TTCCTTGCATCAATCC--TGTACATGTGCTACTTCCACCT--CTTTGGATTTGTCGAGGA 771
consensus_8305#3      ------------------------------------------------ATTCGGCACGNG 12
consensus_8305#1      TTCCTTGCATCAATCC--TGTACATGTGCTACTTCCACCT--CTTCGGATTTGTCGAGGA 604
consensus_8305#2      CCTCTTGGACCAGGTCACCTCACCTCTTCTTCCTTCACCTACTCTCTTAACGGTTGCTCA 209
                                                                      *   *       

consensus_8305#0      ---GAGCTGGAGCATGGTGATCGCCTTTGGTGTGACATCGCTTGCTGCTGCAATTGTGGA 828
consensus_8305#3      CTCGTGCCGAATTCGGCACGACGCCTTTGGTGTGACATCGCTTGCTGCTGCAATTGTGGA 72
consensus_8305#1      ---GAGCTGGACCATGGTGATTGCCTTTGGCGTGACATCGCTTTCTGCTGCAATTGTGGA 661
consensus_8305#2      CTTCAGCTCTCTGTAGCATGATATGACTAGTGTGTT-TAGATCCCTATT--AGCTGCCG- 265
                           **        *           * * ***   * * *  **  *  *  **  * 

consensus_8305#0      GTCACTCCCTATCAGCACACGCCTGGACGACAATCTGACTGTGCCACTCGCCTCTGTCCT 888
consensus_8305#3      GTCACTCCCTATCAGCACACGCCTGGACGACAATCTGACTGTGCCACTCGCCTCTGTCCT 132
consensus_8305#1      GTCGCTCTCTATCAGCACACGCTTGGACGACAATCTGACTGTGCCACTCGCCTCTGTCCT 721
consensus_8305#2      GCAAATTTCCATAAGCACACCATTAATTTGTTGGTTAATTGAGGTGNTTTGTGTCAGATC 325
                      *    *  * ** *******   *           * * ** *    *            

consensus_8305#0      CGTTGGTGTCCTTGTTTTCTATTATACTGGGGCCAGAAACCTGTGTTGTATGAGCGCTGA 948
consensus_8305#3      CGTTGGTGTCCTTGTTTTCTATTATACTGGGGCCAGAAACCTGTGTTGTATGAGCGCTGA 192
consensus_8305#1      CATTGGTGTCCTTGTTTTCTATTATATTGGGGCCAGAAACCTGTGCTGCATGAGCGCTGA 781
consensus_8305#2      CTGTGTTAGTCACATCACATAT-ATACTGCAGC-ATGTCTTTCCGCAGCAATTATGCTGA 383
                      *  ** *   *   *    *** *** **  ** *      *  *  * *     *****

consensus_8305#0      CA---GCAGTGACATTTCTGCACTTGTGCAGAATCAGATGGTCTTGGACAGGTTCTAGTG 1005
consensus_8305#3      CA---GCAGTGACATTTCTGCACTTGTGCAGAATCAGATGGTCTTGGACAGGTTCTAGTG 249
consensus_8305#1      CA---GCAGCGATATTTCTGCACTTGTTCAGAATCAGATGTTCTTGGGCAGGTTCTAGTG 838
consensus_8305#2      TTCTTGNACTGGTATGTC-GGGCTTGTCCATCTTCAGAAACTCTGCAGGAAACTCGTGCA 442
                           * *  *  ** ** *  ***** **   *****   ***     *   **  *  

consensus_8305#0      -ACTACTGACTAGTAAGTA-GCTGCCCTGCAGAGCTGAAAAGAAACTGATTTACTAATAT 1063
consensus_8305#3      -ACTACTGACTANTAAGTA-GCTGCCCTGCAGAGCTGAAAAGAAACTGATTTACTAATAT 307
consensus_8305#1      -A--------------GTA-GCCGCCTTGCAGAGCTCAAAAACAACCGACTTACTAAAAT 882
consensus_8305#2      TATTACTGTTGGCTTAGTATACTTCCTTATGTGGCC---------TTTGTTCAGGTAAAC 493
                       *              ***  *  ** *     **               * *   * * 

consensus_8305#0      CAGATTTGATTA-ATGTAACAAGGATCGATACAAGCTACAAGCATCATAGTT-------- 1114
consensus_8305#3      CAGATTTGATTA-ATGTNACAAGGATCGATACNAGCTACAAGCATCATAGTT-------- 358
consensus_8305#1      CAGATTCGATTAGATGTAACAACGATGGATACAGGCTGCAAGAATCATAATTTTGTGATT 942
consensus_8305#2      CAGAT-CGATCGAGTTCCA-GACCAACAATATA--CTAGCAGTATCTTTAATT------- 542
                      *****  ***    *   *  *  *   ***    **   ** *** *   *        

consensus_8305#0      GTATCTTGTAATCAAGAAAAACAAAAGCTATCTGAT------ATACTAGTAAGGCAAAAG 1168
consensus_8305#3      GTATCTTGTAATCAAGAAAAACAAAAGCTATCTGAT------ATACTNGTAAGGCA---- 408
consensus_8305#1      GTATCTTGTGATCAAGGAAAACAAAAAGTATCTGACTGTCTGATATTAGTAAAGCAAAAC 1002
consensus_8305#2      TTGTCATGTCATAGCCATACCAAGTGTGTTTCTGCC------TTCCTGACAACGT----- 591
                       * ** *** **      *   *     * ****         *  *   ** *      

consensus_8305#0      TTGAGTAGAGGAAAAACATACCAGAGAGCTG------- 1199
consensus_8305#3      --------------------------------------
consensus_8305#1      TCGAGGAGAGGAAAAACACACCAGATAGCAATCTTCAC 1040
consensus_8305#2      --------------------------------------
                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)