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Oryza sativa
cluster # 8308 cluster # 8308       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8308#0 length = 2187 sequences # 3  
consensus_8308#1 length = 953 sequences # 2  

consensusID : consensus_8308#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2187
fasta sequence
                              [GCCGGACAGCACTGGGCTGTTGTTGGCCTGCAGCTGCCTTCTCACTCCCACTCACTGAATGATTGATTTCTGGCGAGGGATTGATTCTCCGTTCCTTTTGCTGAGGGGAAAATCTTGGATTTTAGGGGCTGTTCTAGCCTTCTGCTGAGGCCTCTTAGTTTTCCTGTTTTGTTCTGGGGCAGGTGGATTTCTGTTTTCTGGGGATTATTGGGGGAAATATTGTTCCTTGTTTATTTCAGAAGTATTTGCAGGGGTAATACGACATTTTTTGGGGAGTAAAATAATGCTTTATATACTCTCAGAAATATACTGCCTAAAGTTTTTGTGGACAGAACCAGTCCAAATTTTTAAGTAGAGATTACTTGATCCCTATTACAGAGGTAAATGGTTCCAATTGAACGAATTACACAAGAATATAGTATCCCATCGAGGTTTGGAGTTCAATATTGGTGCAAGGATTGGTTATATAATGTGTCTTCCTGCTGCAGCTGTGTATGGACTACTCATGATTTGTTTTGTTTTGTCACATGCCTTCTTGCAGCAGCAGCCGCAACTTATGGAGAACGTGGCGGTGGCCAAGCGGAGCAGGCTGGAGCAACACCGCACGCTCAGTGACAACTCCTTCCGTGTGGAGGATCTCCCTGAGGAAATTCAATCTCTTCTATTATCTCTGCTGTCACTGAAAGAGGCTGCTAGTACAAGCATCGTGTCGAGAAAC-TGGA-GAAAACTTTGGACACGGTATCCTAATCTA-TGC-TTTGATGGCAGCAAGGACGGGCCTGCTGATATGGATAGTGTGAAAATAGAAAGAATGAAGTTCATTGATACAGTAAATTCTATTATTCAGCAACACAGTGGAATAGGGCTCAATAAATTCAGTATCAGGTGCAACCTTCTGAAGGACGACTCAGACATTCTTGATAGGTGGATTCGCTTTGCCACTGCATCAAAGGCTAAGATTATAGATATGAACCTGTGCACAAATAGAAATAATAAAGGACCAACCAAACATTTGTATGACTTCCCTCTTGAGGCTTTCGGTGATCAAGATATCCCTTTTATCCAGTGCTTGTTTCTCAACAATGTTTCTATAAAGCCACACTCGGATATTGGCTTTACGAAACTCAGGAGCCTTCATTTGCACTGTGTTCAAATAATTGGAGATCTTTCAGGCTTGCTATTTAATTGCTCCAGTCTTGAGGACTTGGAGGTCTTTGCGTGCTTGGGTGTGACTGCTCTGAATATTCCACACCAACTCAATAAACTTAGGCATTTGCTAATTTGTAATATGCGTATCCAGATGCTGGAGTTTCATGTTCCTGGTCTTTCTCATTTTGAATACAAAGGTACTATGATTCCTATAATGCTTCATGGTTGCTCAAAATTACAGAAGGCAACCCTGAATTTTCACCAGACATGGCTTGAAGAAGATAATAATAAAGTATTGGGCCATGTATTCCATGGAATTCCCAGTGTTTCGGCAGTTGAGGTGCTCAATTTACTTGTTGATATTTGCACAAAGCAATCGGTCTGGTCCTCACAGGTGCATACGTTGACAGCAAGACCAACAATCATGTTTATGAATTTGAAGCATCTGACTTATGAGATACTTATTTTTACTAAAGATCCAAACAGCCACAGTGGAGTTCTTCAGCTGGCTCAGTATTTAGCTTTTGCACCGCAGCTGGAGACTCTAGAATTGCATATGTTGTATCATTCGACTCACTGCCGCTGCTGGCATGAGGGTGCGGGAGTCTCCTACGGACATATGCCCCATCATCACCTCAAGATGGTCTACATGAGTGGGTTCAGGTGCTACCGGGCTCAGGTCGAGCTGCTGTTTGCCATTCTTGAAATGGGTGATGAGCTTGAGCATGTGACCATTGATCCAATGACGAGAGTACCGTATAGCCCTGATTTGATGAATTTAGGCATACCTGAGGACGAGATATGTCAATGGGCGAACCGTACCTCACAACGGTTTGGTAAAGCAATCTCTGTTGTAAAACCTCCCTAGGTGGTGTTGGTAGTCCTGTGCATATACGACTTATTACCACCTAGATAAGTGTTTGTTCAGATTCAGTACTGAAATTGCTGACACAGGGGTTTCTGTTTTGTTTCCATGAGTAAATTGTTTTTTATTTTATTGTTTGACAATAAAAGGCTTGGACTTGTTTCTTAAAAAAAAGA]

[+] EMBL AK100628             [GCCGGACAGCACTGGGCTGTTGTTGGCCTGCAGCTGCCTTCTCACTCCCACTCACTGAATGATTGATTTCTGGCGAGGGATTGATTCTCCGTTCCTTTTGCTGAGGGGAAAATCTTGGATTTTAGGGGCTGTTCTAGCCTTCTGCTGAGGCCTCTTAGTTTTCCTGTTTTGTTCTGGGGCAGGTGGATTTCTGTTTTCTGGGGATTATTGGGGGAAATATTGTTCCTTGTTTATTTCAGAAGTATTTGCAGGGGTAATACGACATTTTTTGGGGAGTAAAATAATGCTTTATATACTCTCAGAAATATACTGCCTAAAGTTTTTGTGGACAGAACCAGTCCAAATTTTTAAGTAGAGATTACTTGATCCCTATTACAGAGGTAAATGGTTCCAATTGAACGAATTACACAAGAATATAGTATCCCATCGAGGTTTGGAGTTCAATATTGGTGCAAGGATTGGTTATATAATGTGTCTTCCTGCTGCAGCTGTGTATGGACTACTCATGATTTGTTTTGTTTTGTCACATGCCTTCTTGCAGCAGCAGCCGCAACTTATGGAGAACGTGGCGGTGGCCAAGCGGAGCAGGCTGGAGCAACACCGCACGCTCAGTGACAACTCCTTCCGTGTGGAGGATCTCCCTGAGGAAATTCAATCTCTTCTATTATCTCTGCTGTCACTGAAAGAGGCTGCTAGTACAAGCATCGTGTCGAGAAAC TGGA GAAAACTTTGGACACGGTATCCTAATCTA TGC TTTGATGGCAGCAAGGACGGGCCTGCTGATATGGATAGTGTGAAAATAGAAAGAATGAAGTTCATTGATACAGTAAATTCTATTATTCAGCAACACAGTGGAATAGGGCTCAATAAATTCAGTATCAGGTGCAACCTTCTGAAGGACGACTCAGACATTCTTGATAGGTGGATTCGCTTTGCCACTGCATCAAAGGCTAAGATTATAGATATGAACCTGTGCACAAATAGAAATAATAAAGGACCAACCAAACATTTGTATGACTTCCCTCTTGAGGCTTTCGGTGATCAAGATATCCCTTTTATCCAGTGCTTGTTTCTCAACAATGTTTCTATAAAGCCACACTCGGATATTGGCTTTACGAAACTCAGGAGCCTTCATTTGCACTGTGTTCAAATAATTGGAGATCTTTCAGGCTTGCTATTTAATTGCTCCAGTCTTGAGGACTTGGAGGTCTTTGCGTGCTTGGGTGTGACTGCTCTGAATATTCCACACCAACTCAATAAACTTAGGCATTTGCTAATTTGTAATATGCGTATCCAGATGCTGGAGTTTCATGTTCCTGGTCTTTCTCATTTTGAATACAAAGGTACTATGATTCCTATAATGCTTCATGGTTGCTCAAAATTACAGAAGGCAACCCTGAATTTTCACCAGACATGGCTTGAAGAAGATAATAATAAAGTATTGGGCCATGTATTCCATGGAATTCCCAGTGTTTCGGCAGTTGAGGTGCTCAATTTACTTGTTGATATTTGCACAAAGCAATCGGTCTGGTCCTCACAGGTGCATACGTTGACAGCAAGACCAACAATCATGTTTATGAATTTGAAGCATCTGACTTATGAGATACTTATTTTTACTAAAGATCCAAACAGCCACAGTGGAGTTCTTCAGCTGGCTCAGTATTTAGCTTTTGCACCGCAGCTGGAGACTCTAGAATTGCATATGTTGTATCATTCGACTCACTGCCGCTGCTGGCATGAGGGTGCGGGAGTCTCCTACGGACATATGCCCCATCATCACCTCAAGATGGTCTACATGAGTGGGTTCAGGTGCTACCGGGCTCAGGTCGAGCTGCTGTTTGCCATTCTTGAAATGGGTGATGAGCTTGAGCATGTGACCATTGATCCAATGACGAGAGTACCGTATAGCCCTGATTTGATGAATTTAGGCATACCTGAGGACGAGATATGTCAATGGGCGAACCGTACCTCACAACGGTTTGGTAAAGCAATCTCTGTTGTAAAACCTCCCTAGGTGGTGTTGGTAGTCCTGTGCATATACGACTTATTACCACCTAGATAAGTGTTTGTTCAGATTCAGTACTGAAATTGCTGACACAGGGGTTTCTGTTTTGTTTCCATGAGTAAATTGTTTTTTATT                                               ]
[+] EMBL BE229468             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 cgagCACTGAAAGAGGCTGCTAGTACAAGCATCGTGTCGAGAAACYTGGAVGAAACTTTTGGACACGGTATCCTAATCTATTGCTTTTGATGGCAGCAAGGACGGGCCTKCTGATATGGATAGTGTGAAAATAGAAAGAATGAAGTTCATTGATACAGTAAATTCTATTATTCAGCAACACAGTGGAATAGGGCTCAATAAATTCAGTATCAGGTGCAACCTTCTGAAGGRCGACTCAGACATTCTTGATAGGTGGATTCGCTTTGCCACTGCATCAAAGGCTAAGATTATAGATATGAACCTGTGCACAAATAGAAATAATAAAGGMCCAACCAAACATTTGTATGACTTCCCTCTTGAGGCTTTCGGTGATCAAGATATCCCTTTTATCCAGTGCTTGTTTCTCAACAATGTTTCTATAAAGCCACACTCGGATATTGGCTTTACGAAACTCAGGAGCCTTCATTTGCACTGTGTTCAAATAATTGGAGATCTTTCAGGCTTGCTATTTAATTGCTCCAGTCTTGAGGACTTGGAGGTCTTTGCGTGCTTGGGTGTGACTGCTCTGAATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB681896             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATAATAAAGTATTGGGCCATGTATTCCATGGAATTCCCAGTGTTTCGGCAGTTGAGGTGCTCAATTTACTTGTTGATATTTGCACAAAGCAATCGGTCTGGTCCTCACAGGTGCATACGTTGACAGCAAGACCAACAATCATGTTTATGAATTTGAAGCATCTGACTTATGAGATACTTATTTTTACTAAAGATCCAAACAGCCACAGTGGAGTTCTTCAGCTGGCTCAGTATTTAGCTTTTGCACCGCAGCTGGAGACTCTAGAATTGCATATGTTGTATCATTCGACTCACTGCCGCTGCTGGCATGAGGGTGCGGGAGTCTCCTACGGACATATGCCCCATCATCACCTCAAGATGGTCTACATGAGTGGGTTCAGGTGCTACCGGGCTCAGGTCGAGCTGCTGTTTGCCATTCTTGAAATGGGTGATGAGCTTGAGCATGTGACCATTGATCCAATGACGAGAGTACCGTATAGCCCTGATTTGATGAATTTAGGCATACCTGAGGACGAGATATGTCAATGGGCGAACCGTACCTCACAACGGTTTGGTAAAGCAATCTCTGTTGTAAAACCTCCCTAGGTGGTGTTGGTAGTCCTGTGCATATACGACTTATTACCACCTAGATAAGTGTTTGTTCAGATTCAGTACTGAAATTGCTGACACAGGGGTTTCTGTTTTGTTTCCATGAGTAAATTGTTTTTTATTTTATTGTTTGACAATAAAAGGCTTGGACTTGTTTCTTAAAAAAAAGA]


>consensus_8308#0 GCCGGACAGCACTGGGCTGTTGTTGGCCTGCAGCTGCCTTCTCACTCCCACTCACTGAAT GATTGATTTCTGGCGAGGGATTGATTCTCCGTTCCTTTTGCTGAGGGGAAAATCTTGGAT TTTAGGGGCTGTTCTAGCCTTCTGCTGAGGCCTCTTAGTTTTCCTGTTTTGTTCTGGGGC AGGTGGATTTCTGTTTTCTGGGGATTATTGGGGGAAATATTGTTCCTTGTTTATTTCAGA AGTATTTGCAGGGGTAATACGACATTTTTTGGGGAGTAAAATAATGCTTTATATACTCTC AGAAATATACTGCCTAAAGTTTTTGTGGACAGAACCAGTCCAAATTTTTAAGTAGAGATT ACTTGATCCCTATTACAGAGGTAAATGGTTCCAATTGAACGAATTACACAAGAATATAGT ATCCCATCGAGGTTTGGAGTTCAATATTGGTGCAAGGATTGGTTATATAATGTGTCTTCC TGCTGCAGCTGTGTATGGACTACTCATGATTTGTTTTGTTTTGTCACATGCCTTCTTGCA GCAGCAGCCGCAACTTATGGAGAACGTGGCGGTGGCCAAGCGGAGCAGGCTGGAGCAACA CCGCACGCTCAGTGACAACTCCTTCCGTGTGGAGGATCTCCCTGAGGAAATTCAATCTCT TCTATTATCTCTGCTGTCACTGAAAGAGGCTGCTAGTACAAGCATCGTGTCGAGAAACTG GAGAAAACTTTGGACACGGTATCCTAATCTATGCTTTGATGGCAGCAAGGACGGGCCTGC TGATATGGATAGTGTGAAAATAGAAAGAATGAAGTTCATTGATACAGTAAATTCTATTAT TCAGCAACACAGTGGAATAGGGCTCAATAAATTCAGTATCAGGTGCAACCTTCTGAAGGA CGACTCAGACATTCTTGATAGGTGGATTCGCTTTGCCACTGCATCAAAGGCTAAGATTAT AGATATGAACCTGTGCACAAATAGAAATAATAAAGGACCAACCAAACATTTGTATGACTT CCCTCTTGAGGCTTTCGGTGATCAAGATATCCCTTTTATCCAGTGCTTGTTTCTCAACAA TGTTTCTATAAAGCCACACTCGGATATTGGCTTTACGAAACTCAGGAGCCTTCATTTGCA CTGTGTTCAAATAATTGGAGATCTTTCAGGCTTGCTATTTAATTGCTCCAGTCTTGAGGA CTTGGAGGTCTTTGCGTGCTTGGGTGTGACTGCTCTGAATATTCCACACCAACTCAATAA ACTTAGGCATTTGCTAATTTGTAATATGCGTATCCAGATGCTGGAGTTTCATGTTCCTGG TCTTTCTCATTTTGAATACAAAGGTACTATGATTCCTATAATGCTTCATGGTTGCTCAAA ATTACAGAAGGCAACCCTGAATTTTCACCAGACATGGCTTGAAGAAGATAATAATAAAGT ATTGGGCCATGTATTCCATGGAATTCCCAGTGTTTCGGCAGTTGAGGTGCTCAATTTACT TGTTGATATTTGCACAAAGCAATCGGTCTGGTCCTCACAGGTGCATACGTTGACAGCAAG ACCAACAATCATGTTTATGAATTTGAAGCATCTGACTTATGAGATACTTATTTTTACTAA AGATCCAAACAGCCACAGTGGAGTTCTTCAGCTGGCTCAGTATTTAGCTTTTGCACCGCA GCTGGAGACTCTAGAATTGCATATGTTGTATCATTCGACTCACTGCCGCTGCTGGCATGA GGGTGCGGGAGTCTCCTACGGACATATGCCCCATCATCACCTCAAGATGGTCTACATGAG TGGGTTCAGGTGCTACCGGGCTCAGGTCGAGCTGCTGTTTGCCATTCTTGAAATGGGTGA TGAGCTTGAGCATGTGACCATTGATCCAATGACGAGAGTACCGTATAGCCCTGATTTGAT GAATTTAGGCATACCTGAGGACGAGATATGTCAATGGGCGAACCGTACCTCACAACGGTT TGGTAAAGCAATCTCTGTTGTAAAACCTCCCTAGGTGGTGTTGGTAGTCCTGTGCATATA CGACTTATTACCACCTAGATAAGTGTTTGTTCAGATTCAGTACTGAAATTGCTGACACAG GGGTTTCTGTTTTGTTTCCATGAGTAAATTGTTTTTTATTTTATTGTTTGACAATAAAAG GCTTGGACTTGTTTCTTAAAAAAAAGA



consensusID : consensus_8308#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 953
fasta sequence
                              [GCAGACTTCTCGGTTCCATGTTTAATTTCACAAGTATTTGCAGGGTCCCAGCTCCACTTGTAAGTGTTTTTGGTGTTCATGCTAGGTTTGGGCTTCCTTGGTAAATCTGCTGAATACCTCGCGAGGGACAAAGACAGGATCTGTCCAGTTCTTTTTTTTTACTTGTGCAAGACAGAAGATTATGTAATCCCTATTACAAAACGGAAAGGATTCCAAATACACAAACTACTTCTGCGTAATAACAATATTTATCCAGTCAAGGTTCGGAGTCCTGTGTCAAAGTCGGTGTTGGTACATATGATAATTACTATTATATCTGTCTTCTGTATAGACTAGATCCGTGATGTTCTGTTTTGTGGTTGTGGCCTCCTTTGTAGCAGCAGCTTATGGAGAACACGATGGCGGCCAAGCGGAGCTGGATGGAGCACCATCGTGTGCTCAGCGACGACTCCTCCTTTCACATGGAAGACCTCCCGG---AGCAGCCGCAACTTATGGAGAACGTGGCGGTGGCCAAGCGGAGCAGGCTGGAGCAACACCGCACGCTCAGTGACAACTCCTTCCGTGTGGAGGATCTCCCTGAGGAAATTCAATCTCTTCTATTATCTCTGCTGTCACTGAAAGAGGCTGCTAGTACAAGCATCGTGTCGAGAAACTGGAGAAAACTTTGGACACGGTATCCTAATCTATGCTTTGATGGCAGCAAGGACGGGCCTGCTGATATGGATAGTGTGAAAATAGAAAGAATGAAGTTCATTGATACAGTAAATTCTATTATTCAGCAACACAGTGGAATAGGGCTCAATAAATTCAGTATCAGGTGCAACCTTCTGAAGGACGACTCAGACATTCTTGATAGGTGGATTCGCTTTGCCACTGCATCAAAGGCTAAGATTATAGATATGAACCTGTGCACAAATAGAAATAATAAAGGACCAACCAAACATTTGTATGAC]

[+] EMBL CB681895             [GCAGACTTCTCGGTTCCATGTTTAATTTCACAAGTATTTGCAGGGTCCCAGCTCCACTTGTAAGTGTTTTTGGTGTTCATGCTAGGTTTGGGCTTCCTTGGTAAATCTGCTGAATACCTCGCGAGGGACAAAGACAGGATCTGTCCAGTTCTTTTTTTTTACTTGTGCAAGACAGAAGATTATGTAATCCCTATTACAAAACGGAAAGGATTCCAAATACACAAACTACTTCTGCGTAATAACAATATTTATCCAGTCAAGGTTCGGAGTCCTGTGTCAAAGTCGGTGTTGGTACATATGATAATTACTATTATATCTGTCTTCTGTATAGACTAGATCCGTGATGTTCTGTTTTGTGGTTGTGGCCTCCTTTGTAGCAGCAGCTTATGGAGAACACGATGGCGGCCAAGCGGAGCTGGATGGAGCACCATCGTGTGCTCAGCGACGACTCCTCCTTTCACATGGAAGACCTCCCGG   AGCAGCCGCAACTTATGGAGAACGTGGCGGTGGCCAAGCGGAGCAGGCTGGAGCAACACCGCACGCTCAGTGACAACTCCTTCCGTGTGGAGGATCTCCCTGAGGAAATTCAATCTCTTCTATTATCTCTGCTGTCACTGAAAGAGGCTGCTAGTACAAGCATCGTGTCGAGAAACTGGAGAAAACTTTGGACACGGTATCCTAATCTATGCTTTGATGGCAGCAAGGACGGGCCTGCTGATATGGATAGTGTGAAAATAGAAAGAATGAAGTTCATTGATACAGTAAATTCTATTA                                                                                                                                                                                   ]
[+] EMBL CF303216             [                                                                                                                                                                                                                                                                                                                                                         cgaggGTTTTGTGGTTGTGGCCTCCTTTGTAGCAGCAGCTTATGGAGAACACGATGGCGGCCAAGCGGAGCTGGATGGAGCACCATCGTGTGCTCAGCGACGACTCCTCCTTTCACATGGAAGACCTCCCGGAGCAGCAGCCGCAACTTATGGAGAACGTGGCGGTGGCCAAGCGGAGCAGGCTGGAGCAACACCGCACGCTCAGTGACAACTCCTTCCGTGTGGAGGATCTCCCTGAGGAAATTCAATCTCTTCTATTATCTCTGCTGTCACTGAAAGAGGCTGCTAGTACAAGCATCGTGTCGAGAAACTGGAGAAAACTTTGGACACGGTATCCTAATCTATGCTTTGATGGCAGCAAGGACGGGCCTGCTGATATGGATAGTGTGAAAATAGAAAGAATGAAGTTCATTGATACAGTAAATTCTATTATTCAGCAACACAGTGGAATAGGGCTCAATAAATTCAGTATCAGGTGCAACCTTCTGAAGGACGACTCAGACATTCTTGATAGGTGGATTCGCTTTGCCACTGCATCAAAGGCTAAGATTATAGATATGAACCTGTGCACAAATAGAAATAATAAAGGACCAACCAAACATTTGTATGAC]


>consensus_8308#1 GCAGACTTCTCGGTTCCATGTTTAATTTCACAAGTATTTGCAGGGTCCCAGCTCCACTTG TAAGTGTTTTTGGTGTTCATGCTAGGTTTGGGCTTCCTTGGTAAATCTGCTGAATACCTC GCGAGGGACAAAGACAGGATCTGTCCAGTTCTTTTTTTTTACTTGTGCAAGACAGAAGAT TATGTAATCCCTATTACAAAACGGAAAGGATTCCAAATACACAAACTACTTCTGCGTAAT AACAATATTTATCCAGTCAAGGTTCGGAGTCCTGTGTCAAAGTCGGTGTTGGTACATATG ATAATTACTATTATATCTGTCTTCTGTATAGACTAGATCCGTGATGTTCTGTTTTGTGGT TGTGGCCTCCTTTGTAGCAGCAGCTTATGGAGAACACGATGGCGGCCAAGCGGAGCTGGA TGGAGCACCATCGTGTGCTCAGCGACGACTCCTCCTTTCACATGGAAGACCTCCCGGAGC AGCCGCAACTTATGGAGAACGTGGCGGTGGCCAAGCGGAGCAGGCTGGAGCAACACCGCA CGCTCAGTGACAACTCCTTCCGTGTGGAGGATCTCCCTGAGGAAATTCAATCTCTTCTAT TATCTCTGCTGTCACTGAAAGAGGCTGCTAGTACAAGCATCGTGTCGAGAAACTGGAGAA AACTTTGGACACGGTATCCTAATCTATGCTTTGATGGCAGCAAGGACGGGCCTGCTGATA TGGATAGTGTGAAAATAGAAAGAATGAAGTTCATTGATACAGTAAATTCTATTATTCAGC AACACAGTGGAATAGGGCTCAATAAATTCAGTATCAGGTGCAACCTTCTGAAGGACGACT CAGACATTCTTGATAGGTGGATTCGCTTTGCCACTGCATCAAAGGCTAAGATTATAGATA TGAACCTGTGCACAAATAGAAATAATAAAGGACCAACCAAACATTTGTATGAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8308#0      GCCGGACAGCACTGGGCTGTTGTTGGCCTGCAGCTGCCTTCTCACTCCCACTCACTGAAT 60
consensus_8308#1      --------------------------------GCAGACTTCTCGGTTCCA-TGTTTAATT 27
                                                      ** * ******  * *** *   * * *

consensus_8308#0      GATTGATTTCTGGCGAGGGATTGATTCTCCGTTCCTTTTGCTGAGGGGAAAATCTTGGAT 120
consensus_8308#1      TCACAAGTATTTGCAGGG-------TCCCAGCTCCACTTG-TAAGTGT----TTTTGGTG 75
                           * *  * **  **       ** * * ***  *** * ** *     * ****  

consensus_8308#0      TTTAGGGGCTGTTCTAGCCTTCTGCTGAGGCCTCTTAGTTTTCCTGTTTTGTTCTGGGGC 180
consensus_8308#1      TTCATGCTAGGTTTGGGCTTCCTTGGTAAATCTGCTGAATACCTCGCGAGGGACAAAGAC 135
                      ** * *    ***   ** * **    *   **  *   *  *  *    *  *   * *

consensus_8308#0      AGG-----TGGATTTCTGTTTTCTGGGGATTATTGGGGGAAATATTGTTCCTTGTTTATT 235
consensus_8308#1      AGGATCTGTCCAGTTCTTTTTTTTTACTTGTGCAAGACAGAAGATTATGTAATCCCTATT 195
                      ***     *  * **** **** *      *    *    ** *** *    *   ****

consensus_8308#0      TCAGAAGTATTTGCAGGGGTAATACGACATTTTTTGGGGAGTAAAATAATGCTTTATATA 295
consensus_8308#1      ACAAAACGGAAAGGATTCCAAATACACAAACTACTTCTGCGTAA--TAACAATATTTATC 253
                       ** **      * *     *****   *  *  *   * ****  ***   * * *** 

consensus_8308#0      CTCTCAGAAATATACTGCCTAAAGTTTTTGTGGACAGAACCAGTCCAAATTTTTAAG-TA 354
consensus_8308#1      CAGTCAAG--------GTTCGGAGTCCT-GTGT-CAAAGTCGGTGTTGGTACATATGATA 303
                      *  ***          *     ***  * ***  ** *  * **     *   ** * **

consensus_8308#0      GAGATTACTTGATCCCTATTACAGAGGTAAATGGTTCCAATTGAACGAATTACACAAGAA 414
consensus_8308#1      ATTACTATTATATCTGTCTTCTGTATAGACTAGATCCGTGATGTTCTGTTT---TGTGGT 360
                         * ** *  ***  * **    *   *   * * *    **  *   **      *  

consensus_8308#0      TATAGTATCCCATCGAGGTTTGGAGTTCAATATTGGTGCAAGGATTGGTTATATAATGTG 474
consensus_8308#1      TGTGGCCTCCTTTGTAG--CAGCAGCTTA----TGGAGAACACGATGGCGGCCAAGCGGA 414
                      * * *  ***  *  **    * ** * *    *** * *     ***      *  *  

consensus_8308#0      TCTTCCTGCTGCAGCTGTGTATGGACTACTCATGATTTGTTTTGTTTTGTCACATGCCTT 534
consensus_8308#1      GCTGGATGGAGCACCATCGTGTGCTC-AGCGACGACTCCTCCTTTCACATGGAAGACCTC 473
                       **   **  *** *   ** **  * *   * ** *  *  * *    *   *  *** 

consensus_8308#0      CTTGCAGCAGCAGCCGCAACTTATGGAGAACGTGGCGGTGGCCAAGCGGAGCAGGCTGGA 594
consensus_8308#1      CCGG----AGCAGCCGCAACTTATGGAGAACGTGGCGGTGGCCAAGCGGAGCAGGCTGGA 529
                      *  *    ****************************************************

consensus_8308#0      GCAACACCGCACGCTCAGTGACAACTCCTTCCGTGTGGAGGATCTCCCTGAGGAAATTCA 654
consensus_8308#1      GCAACACCGCACGCTCAGTGACAACTCCTTCCGTGTGGAGGATCTCCCTGAGGAAATTCA 589
                      ************************************************************

consensus_8308#0      ATCTCTTCTATTATCTCTGCTGTCACTGAAAGAGGCTGCTAGTACAAGCATCGTGTCGAG 714
consensus_8308#1      ATCTCTTCTATTATCTCTGCTGTCACTGAAAGAGGCTGCTAGTACAAGCATCGTGTCGAG 649
                      ************************************************************

consensus_8308#0      AAACTGGAGAAAACTTTGGACACGGTATCCTAATCTATGCTTTGATGGCAGCAAGGACGG 774
consensus_8308#1      AAACTGGAGAAAACTTTGGACACGGTATCCTAATCTATGCTTTGATGGCAGCAAGGACGG 709
                      ************************************************************

consensus_8308#0      GCCTGCTGATATGGATAGTGTGAAAATAGAAAGAATGAAGTTCATTGATACAGTAAATTC 834
consensus_8308#1      GCCTGCTGATATGGATAGTGTGAAAATAGAAAGAATGAAGTTCATTGATACAGTAAATTC 769
                      ************************************************************

consensus_8308#0      TATTATTCAGCAACACAGTGGAATAGGGCTCAATAAATTCAGTATCAGGTGCAACCTTCT 894
consensus_8308#1      TATTATTCAGCAACACAGTGGAATAGGGCTCAATAAATTCAGTATCAGGTGCAACCTTCT 829
                      ************************************************************

consensus_8308#0      GAAGGACGACTCAGACATTCTTGATAGGTGGATTCGCTTTGCCACTGCATCAAAGGCTAA 954
consensus_8308#1      GAAGGACGACTCAGACATTCTTGATAGGTGGATTCGCTTTGCCACTGCATCAAAGGCTAA 889
                      ************************************************************

consensus_8308#0      GATTATAGATATGAACCTGTGCACAAATAGAAATAATAAAGGACCAACCAAACATTTGTA 1014
consensus_8308#1      GATTATAGATATGAACCTGTGCACAAATAGAAATAATAAAGGACCAACCAAACATTTGTA 949
                      ************************************************************

consensus_8308#0      TGACTTCCCTCTTGAGGCTTTCGGTGATCAAGATATCCCTTTTATCCAGTGCTTGTTTCT 1074
consensus_8308#1      TGAC-------------------------------------------------------- 953
                      ****                                                        

consensus_8308#0      CAACAATGTTTCTATAAAGCCACACTCGGATATTGGCTTTACGAAACTCAGGAGCCTTCA 1134
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      TTTGCACTGTGTTCAAATAATTGGAGATCTTTCAGGCTTGCTATTTAATTGCTCCAGTCT 1194
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      TGAGGACTTGGAGGTCTTTGCGTGCTTGGGTGTGACTGCTCTGAATATTCCACACCAACT 1254
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      CAATAAACTTAGGCATTTGCTAATTTGTAATATGCGTATCCAGATGCTGGAGTTTCATGT 1314
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      TCCTGGTCTTTCTCATTTTGAATACAAAGGTACTATGATTCCTATAATGCTTCATGGTTG 1374
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      CTCAAAATTACAGAAGGCAACCCTGAATTTTCACCAGACATGGCTTGAAGAAGATAATAA 1434
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      TAAAGTATTGGGCCATGTATTCCATGGAATTCCCAGTGTTTCGGCAGTTGAGGTGCTCAA 1494
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      TTTACTTGTTGATATTTGCACAAAGCAATCGGTCTGGTCCTCACAGGTGCATACGTTGAC 1554
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      AGCAAGACCAACAATCATGTTTATGAATTTGAAGCATCTGACTTATGAGATACTTATTTT 1614
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      TACTAAAGATCCAAACAGCCACAGTGGAGTTCTTCAGCTGGCTCAGTATTTAGCTTTTGC 1674
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      ACCGCAGCTGGAGACTCTAGAATTGCATATGTTGTATCATTCGACTCACTGCCGCTGCTG 1734
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      GCATGAGGGTGCGGGAGTCTCCTACGGACATATGCCCCATCATCACCTCAAGATGGTCTA 1794
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      CATGAGTGGGTTCAGGTGCTACCGGGCTCAGGTCGAGCTGCTGTTTGCCATTCTTGAAAT 1854
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      GGGTGATGAGCTTGAGCATGTGACCATTGATCCAATGACGAGAGTACCGTATAGCCCTGA 1914
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      TTTGATGAATTTAGGCATACCTGAGGACGAGATATGTCAATGGGCGAACCGTACCTCACA 1974
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      ACGGTTTGGTAAAGCAATCTCTGTTGTAAAACCTCCCTAGGTGGTGTTGGTAGTCCTGTG 2034
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      CATATACGACTTATTACCACCTAGATAAGTGTTTGTTCAGATTCAGTACTGAAATTGCTG 2094
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      ACACAGGGGTTTCTGTTTTGTTTCCATGAGTAAATTGTTTTTTATTTTATTGTTTGACAA 2154
consensus_8308#1      ------------------------------------------------------------
                                                                                  

consensus_8308#0      TAAAAGGCTTGGACTTGTTTCTTAAAAAAAAGA 2187
consensus_8308#1      ---------------------------------
                                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)