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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8313 cluster # 8313       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8313#0 length = 834 sequences # 5  

consensusID : consensus_8313#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 834
fasta sequence
                              [TCTTCTCCTCCTGCTTCCCCGTCTCACCTCCTCCTCGTCGGCCGCCGCCTCCGCCGCATCCGCCTCCGCCTCCGCCTTATTGCTCACTTCGCTCCGGCGACGGAAAGGCCGGCCGGCAGCTTGGTTGCGACAATCGAATTGAGTGCAAGAGAATACAAAAAATTCGCGTCTCGTCCCGGCCTTAGTGAAGAGGGCATGAGGTTCCTGGGCTGGTACCTCAAGATCG-CGGCCGGCGGCGCGGCCATAGGCGCTGCCATGGAGCTGTTCATGATCCACACCGGCTTCTATGAGAAGGTGACTGTGTTGGAGTCAGAGAAAAGAGCTTGGGAAACCAGCCCAGAGGCTCAAGCCATGAGAGAAGCCCTGAATCCATGGAGGAAGCATGATGACCAAGAGAAAAGATAGCCCTAGACTCATTGCCACCCTTCAATTGTAAGCCCTTCATGAGGTAATTT-GTTGGATGTACTAGTACTCCCTCCGTTTCATGTTAGCATTGCCTACATTCATATATATGTTAATGAATATAGACATATATGTGCGCTTAGATTTATTAACATCTATATGAATGTGGGCAATGCTAGAAAGTCCTGTAACCTGAAACGGAGGTAGTAGCATTTTTGCAGTATTTGTACCTCTCTCGAACTTCTGGATGGTAGGTGGTAGCTTCTACAAATACTTTAGAAGAATACACCCGTATGTCTTGATATATATTTTTTTTGGTTCAACACACATACACAGATGGCATGCCATCTTTATGTGATGCACTGATGTTTCATACTAGATAACAAGGAAATTATAGGCTTGGAGAGGTTGAACAGTTCTATTTTAAAAAAA]

[+] EMBL CF281975             [TCTTCTCCTCCTGCTTCCCCGTCTCACCTCCTCCTCGTCGGCCGCCGCCTCCGCCGCATCCGCCTCCGCCTCCGCCTTATTGCTCACTTCGCTCCGGCGACGGAAAGGCCGGCCGGCAGCTTGGTTGCGACAATCGAATTGAGTGCAAGAGAATACAAAAAATTCGCGTCTCGTCCCGGCCTTAGTGAAGAGGGCATGAGGTTCCTGGGCTGGTGCCTCAAGACNGNCGGCCGGCAGCGCGGCCATAGGCGCTGCCTGGGAGCTGTTCATGATCCACACCGGCTTCTATGAGAAGGTGACTGTGTTGGAGTCAGAGAAAAGAGCTTGGGAAACCAGCCCAGAGGCTCAAGCCATGAGAGAAGCCCTGAATCCATGGAGGAAGCATGATGACCAAGAGAAAAGATAGCCCTAGACTCATTGCCACCCTTCAATTGTAAGCCCTTCATGAGGTAATTTNGTTGGATGTACTAGTACTCCCTCCGTTTCATGTTAGCATTGCCTACATTCATATATATGTTAATGAATATAGACATATATGTGCGCTTAGATTTATTAACATCTATATG                                                                                                                                                                                                                                                                              ]
[+] EMBL CF333455             [                    GTCTCACCTCCTCCCCGTCGGCCGCCGCCTCCGCCGCATCCGCCTCCGCCTCCGCCTTATTGCTCACTTCGCTCCGGCGACGGAGAGGCCGGCCGGCAGCTTGGTTGCGACAATCGAATTGAGTGCAAGAGAATACAAAAAATTCGCGTCTCGTCCCGGCCTTAGTGAAGAGGGCATGAGGTTCCTGGGCTGGTACCTCAAGATCG CGGCCGGCGGCGCGGCCATAGGCGCTGCCATGGAGCTGTTCATGATCCACACCGGCTTCTATGAGAAGGTGACTGTGTTGGAGTCAGAGAAAAGAGCTTGGGAAACCAGCCCAGAGGCTCAAGCCATGAGAGAAGCCCTGAATCCATGGAGGAAGCATGATGACCAAGAGAAAAGATAGCCCTAGACTCATTGCCACCCTTCAATTGTAAGCCCTTCATGAGGTAATTT GTTGGATGTACTAGTACTTCCTCCGTTTCATGTTAGCATTGCCTACATTCATATATATGTTAATGAATATAGACATATATGTGTGCTTAGATTTATTAACATCTATATGAATGTGGGCAATGCTAGAAAGTCCTGTAACCTGAAACGGAGGTAGTAGCATTTTTGCAGTATTTGTACCTCTCTCGA                                                                                                                                                                                                 ]
[+] EMBL AU166875             [                            TCCTCCTCGTCGGCCGCCGCCTCCGCCGCATCCGCCTCCGCCTCCGCCTTATTGCTCACTTCGCTCCGGCGACGGAAAGGCCGGCCGGCAGCTTGGTTGCGACAATCGAATTGAGTGCAAGAGAATACAAAAAATTCGCGTCTCGTCCCGGCCTTAGTGAAGAGGGCATGAGGTTCCTGGGCTGGTACCTCAAGATCG CGGCCGGCGGCGCGGCCATAGGCGCTGCCATGGAGCTGTTCATGATCCACACCGGCTTCTATGAGAAGGTGACTGTGTTGGAGTCAGAGAAAAGAGCTTGGGAAACCAGCCCAGAGGCTCAAGCCATGAGAGAAGCCCTGAATCCATGGAGGAAGCATGATGACCAAGAGAAAAGATAGCCCTAGACTCATTGCCACCCTTCAATTGTAAGCCCTTCATGAGGTAA                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CF333456             [                                                                                                                                                                                                                                                                                                                               AGAGCTTGGGAAACCAGCCCAGAGGCTCAAGCCATGAGAGAAGCCCTGAATCCATGGAGGAAGCATGATGACCAAGAGAAAAGATAGCCCTAGACTCATTGCCACCCTTCAATTGTAAGCCCTTCATGAGGTAATTT GTTGGATGTACTAGTACTTCCTCCGTTTCATGTTAGCATTGCCTACATTCATATATATGTTAATGAATATAGACATATATGTGTGCTTAGATTTATTAACATCTATATGAATGTGGGCAATGCTAGAAAGTCCTGTAACCTGAAACGGAGGTAGTAGCATTTTTGCAGTATTTGTACCTCTCTCGAACTTCTGGATGGTAGGTGGTAGCTTCTACAAATACTTTAGAAGAATACACCCGTATGTCTTGATATATATTTTTTTTGGTTCAACACACATACACAGATGGCATGCCATCTTTATGTGATGCACTGATGTTTCATACTAGATAACAAGGAAATTATAGGCTTGGAGAGGTTGAACAGTTCTATTTTAAAAAAA]
[-] EMBL CF281976             [                                                                                                                                                                                                                                                                                                                                               GCCCAGAGGCTCAAGCCATGAGAGAAGCCCTGAATCCATGGAGGAAGCATGATGACCAAGAGAAAAGATAGCCCTAGACTCATTGCCACCCTTCAATTGTAAGCCCTTCATGAGGTAATTT GTTGGATGTACTAGTACTCCCTCCGTTTCATGTTAGCATTGCCTACATTCATATATATGTTAATGAATATAGACATATATGTGCGCTTAGATTTATTAACATCTATATGAATGTGGGCAATGCTAGAAAGTCCTGTAACCTGAAACGGAGGTAGTAGCATTTTTGCAGTATTTGTACCTCTCTCGAACTTCTGGATGGTAGGTGGTAGCTTCTACAAATACTTTAGAAGAATACACCCGTATGTCTTGATATATATTTTTTTTGGTTCAACACACATACACAGATGGCATGCCATCTTTATGTGATGCACTGATGTTTCATACTAGATAACAAGGAAATTATAGGCTTGGAGAGGTTGAACAGTTCTA    AAAAAA ]


>consensus_8313#0 TCTTCTCCTCCTGCTTCCCCGTCTCACCTCCTCCTCGTCGGCCGCCGCCTCCGCCGCATC CGCCTCCGCCTCCGCCTTATTGCTCACTTCGCTCCGGCGACGGAAAGGCCGGCCGGCAGC TTGGTTGCGACAATCGAATTGAGTGCAAGAGAATACAAAAAATTCGCGTCTCGTCCCGGC CTTAGTGAAGAGGGCATGAGGTTCCTGGGCTGGTACCTCAAGATCGCGGCCGGCGGCGCG GCCATAGGCGCTGCCATGGAGCTGTTCATGATCCACACCGGCTTCTATGAGAAGGTGACT GTGTTGGAGTCAGAGAAAAGAGCTTGGGAAACCAGCCCAGAGGCTCAAGCCATGAGAGAA GCCCTGAATCCATGGAGGAAGCATGATGACCAAGAGAAAAGATAGCCCTAGACTCATTGC CACCCTTCAATTGTAAGCCCTTCATGAGGTAATTTGTTGGATGTACTAGTACTCCCTCCG TTTCATGTTAGCATTGCCTACATTCATATATATGTTAATGAATATAGACATATATGTGCG CTTAGATTTATTAACATCTATATGAATGTGGGCAATGCTAGAAAGTCCTGTAACCTGAAA CGGAGGTAGTAGCATTTTTGCAGTATTTGTACCTCTCTCGAACTTCTGGATGGTAGGTGG TAGCTTCTACAAATACTTTAGAAGAATACACCCGTATGTCTTGATATATATTTTTTTTGG TTCAACACACATACACAGATGGCATGCCATCTTTATGTGATGCACTGATGTTTCATACTA GATAACAAGGAAATTATAGGCTTGGAGAGGTTGAACAGTTCTATTTTAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)