cluster # 8319

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Oryza sativa
cluster # 8319 cluster # 8319 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8319#0 length = 1718 sequences # 5
consensusID : consensus_8319#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1718
fasta sequence
                              [CCTCAACCCTTCCAAGCAACCAACCCACCACCACACTCCGGTCCACGCCCTCCACCACCACCCGCCGCCGCCGCCGCCCAAAACCCTTCTCCCTCCCGGCGGCCATGGCGTTCCCGTCGCCGAACTCCCTCTCCGCGGCGTCCCACCCTACGTCCTCCTCCTCCTCCTTCCACCTCCACCTGCAGCTGCAGCAACCCGTCCCACACCTCCCCTTCCCGCGCTCCCTCCCGCTCAACCTCCCCGTCCTCCGCCTCGCCCGCCCCCTCCTCCCTCCCACCCCGCTAGCCTCCTCCAGAAGCGGCGGCATCGGCATCAGCGGCAGAGGCGATGACGACGAGGGTCGCGACAACGCCGGCGGAGGAGACGGCGGCGACGACAACGCGTCCGTCAACAGGAGGGAAGCGCTGTTCGAGCTGGCGCAGCTGGGGCGGAAGCTCAAGAGCCTCCCAGCCGACCTCGCCGCGGCCATCGAGGGCGGCCGCGTCCCCGGGGAGATCGTGCAGCGGTTCGCCGACCTCGAGAAGTCGGGACTCTTCCGCTGGCTGCTCCAGTTCGGCGGCTTCAAGGAGCGCCTCCTCGCCGACGACCTCTTCCTCGCCAAGGTCGCCATGGAGTGCGGCGTCGGAATCTTCACCAAGACTGCAGCAGAGTATGAGCGAAGGAGGGAAAACTTTGTCAAAGAGCTTGACTTTGTGATTGCAGATGTGGTCATGGCAATAGTTGCAGACTTTATGTTGGTTTGGCTTCCTGCTCCAACAGTGTCTCTGCAGCCACCACTAGCAGTAAATGCAGGATCTATTGCTAAATTCTTCCACAATTGCCCAGATAATGCCTTCCAGGTTGCTTTGGCTGGAACATCATACTCCCTTTTGCAGCGCGTAGGAGCTATTATGAGGAATGGTGCAAAACTTTTTGCAGTGGGAACTAGTGCATCCCTGATTGGAACTGGTGTGACCAATGCACTGATAAAAGCACGAAAGGCTGTTAGTAAGGATTTTGAAGGGGAAAGCGAGGATATTCCAATTGTATCAACTAGTGTTGCCTATGGTGTATACATGGCCGTTTCCAGTAACCTCAGGTACCAAATCCTGGCTGGAGTGATTGAACAGAGGATGCTC-GAGCCATTACTACACCACCACAAACTAGTGTTGAGTGCACTGTGCTTTGCTGTTCGAACAGGGAACACATTCTTGGGTTCTCTACTGTGGGTTGACTATGCCAAGTGGATAGGCATACAATAGGTTCGAACTTTGAATATAGATCTGAAATTGCGAGTCATTAGCAAATACCATGCAGACTCTGAACACTTACGACTCCCGTTTGGCGCAAGAAAATCTAGGACAGATTTCGGTTTTTATGGAACTGAAGCCCGAAGGAAAAGGGTAATTTGT-CGAATTCCCATGAACAAGTGATTGGATTGTTAG-TGGTGGTTTGTGCGTTCTGTTTTGTTGAATTGGATTCCTTTGAAGCAATAATTTTGCCGTCATTTATTTGGTGCGCACGTTCTTGTGTTTGGGACCATTGCATTCTTTGTTTCGTAACGCACAAGAAGAGGCCTCTCGTGTTAAAAAGACCTTCAGTATGATCCTGCAGGCATGAGGTCAATTTTATAAGCAGCTGGCAAAATTTGAATTAATTATAGAACTGTTGATTTTGAGTTTTTTTTTCACCATAGTTTATTTCGAGCATTGGTTTTAAATCATCAAGCACACGTGTAT]

[+] EMBL CB679989             [CCTCAACCCTTCCAAGCAACCAACCCACCACCACACTCCGGTCCACGCCCTCCACCACCACCCGCCGCCGCCGCCGCCCAAAACCCTTCTCCCTCCCGGCGGCCATGGCGTTCCCGTCGCCGAACTCCCTCTCCGCGGCGTCCCACCCTACGTCCTCCTCCTCCTCCTTCCACCTCCACCTGCAGCTGCAGCAACCCGTCCCACACCTCCCCTTCCCGCGCTCCCTCCCGCTCAACCTCCCCGTCCTCCGCCTCGCCCGCCCCCTCCTCCCTCCCACCCCGCTAGCCTCCTCCAGAAGCGGCGGCATCGGCATCAGCGGCAGAGGCGATGACGACGAGGGTCGCGACAACGCCGGCGGAGGAGACGGCGGCGACGACAACGCGTCCGTCAACAGGAGGGAAGCGCTGTTCGAGCTGGCGCAGCTGGGGCGGAAGCTCAAGAGCCTCCCAGCCGACCTCGCCGCGGCCATCGAGGGCGGCCGCGTCCCCGGGGAGATCGTGCAGCGGTTCGCCGACCTCGAGAAGTCGGGACTCTTCCGCTGGCTGCTCCAGTTCGGCGGCTTCAAGGAGCGCCTCCTCGCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK105904             [                                      CGGTCCACGCCCTCCACCACCACCCGCCGCCGCCGCCGCCCAAAACCCTTCTCCCTCCCGGCGGCCATGGCGTTCCCGTCGCCGAACTCCCTCTCCGCGGCGTCCCACCCTACGTCCTCCTCCTCCTCCTTCCACCTCCACCTGCAGCTGCAGCAACCCGTCCCCCACCTCCCCTTCCCGCGCTCCCTCCCGCTCAACCTCCCCGTCCTCCGCCTCGCCCGCCCCCTCCTCCCTCCCGCCCCGCTAGCCTCCTCCGGAAGCGGCGGCATCGGCATCGGCGGCGGAGGCGATGACGACGAGGGTCGCGACAACGCGGGCGGAGGAGACGGCGGCGACGACGACGCGTCGGTCAACAGGAGGGAGGCGCTGTTCGTGCTGGCGCAGCTGGGGCGGAAGCTCGAGAGCCTCCCGGCCGACCTCGCCGCGGCCATCGAGGGCGGCCGCGTCCCCGGGGAGATCGTGCAGCGGTTCGCCGACCTCGAGAAGTCGGGACTCTTCCGCTGGCTGCTCCAGTTCGGCGGCTTCAAGGAGCGCCTCCTCGCCGACGACCTCTTCCTCGCCAAGGTCGCCATGGAGTGCGGCGTCGGAATCTTCACCAAGACTGCAGCAGAGTATGAGCGAAGGAGGGAAAACTTTGTCAAAGAGCTTGACTTTGTGATTGCAGATGTGGTCATGGCAATAGTTGCAGACTTTATGTTGGTTTGGCTTCCTGCTCCAACAGTGTCTCTGCAGCCACCACTAGCAGTAAATGCAGGATCTATTGCTAAATTCTTCCACAATTGCCCAGATAATGCCTTCCAGGTTGCTTTGGCTGGAACATCATACTCCCTTTTGCAGCGCGTAGGAGCTATTATGAGGAATGGTGCAAAACTTTTTGCAGTGGGAACTAGTGCATCCCTGATTGGAACTGGTGTGACCAATGCACTGATAAAAGCACGAAAGGCTGTTAGTAAGGATTTTGAAGGGGAAAGCGAGGATATTCCAATTGTATCAACTAGTGTTGCCTATGGTGTATACATGGCCGTTTCCAGTAACCTCAGGTACCAAATCCTGGCTGGAGTGATTGAACAGAGGATGCTC GAGCCATTACTACACCACCACAAACTAGTGTTGAGTGCACTGTGCTTTGCTGTTCGAACAGGGAACACATTCTTGGGTTCTCTACTGTGGGTTGACTATGCCAAGTGGATAGGCATACAATAGGTTCGAACTTTGAATATAGATCTGAAATTGCGAGTCATTAGCAAATACCATGCAGACTCTGAACACTTACGACTCCCGTTTGGCGCAAGAAAATCTAGGACAGATTTCGGTTTTTATGGAACTGAAGCCCGAAGGAAAAGGGTAATTTGT CGAATTCCCATGAACAAGTGATTGGATTGTTAG TGGTGGTTTGTGCGTTCTGTTTTGTTGAATTGGATTCCTTTGAAGCAATAA                                                                                                                                                                                                                                                   ]
[+] EMBL AU069724             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGGACTCTTCCGCTGGCTGCTCCAGTTCGGCGGCTTCAAGGAGCGCCTCCTCGCCGACGACCTCTTCCTCGCCAAGGTCGCCATGGAGTGCGGCGTCGGAATCTTCACCAAGACTGCAGCAGAGTATGAGCGAAGGAGGGAAAACTTTGTCAAAGAGCTTGACTTTGTGATTGCAGATGTGGTCATGGCAATAGTTGCAGACTTTATGTTGGTTTGGCTTCCTGCTCCAACAGTGTCTCTGCAGCCACCACTAGCAGTAAATGCAGGATCTATTGCTAAATTCTTCCACAATTGCCCAGATAATGCCTTCCAGGTTGCTTTGGCTGGAACATCATACTCCCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU182704             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTAGTAAGGATTTTGAAGGGGAAAGCGAGGATATTTCAATTGTATCAACTAGTGTTGCCTATGGTGTATACATGGCCGTTTCCAGTAACCTCAGGTACCAAATCCTGGCTGGAGTGATTGAACAGAGGATGCTCTGAGCCATTACTACACCACCACAAACTAGTGTTGAGTGCACTGTGCTTTGCTGTTCGAACAGGGAACACATTCTTGGGTTCTCTACTGTGGGTTGACTATGCCAAGTGGATAGGCATACAATAGGTTCGAACTTTGAATATAGATCTGAAATTGCGAGTCATTAGCAAATACCATGCAGACTCTGAACACTTACGACTCCCGTTTGGCGCAAGAAAATCTAGGACAGATTTCGGTTTTTATGGAACTGAAGCCCGAAGGAAAAGGGTAATTTGTNCGAATTCCCATGAACAAGTGATTGGATTGTTAGTTGGTGGTTTGTGC                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU101089             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAAAAGGGTAATTTGT CGAATCCCCATGAACAAGTGATTGGATTGTTAG TGGTGGTTTGTGCGTTCTGTTTTGTTGAATTGGATNCCTTTGAAGCAATAATTTTGCCGTCATTTATTTGGTGCGCACGTTCTTGTGTTTGGGACCATTGCATTCTTTGTTTCGTAACGCACAAGAAGAGGCCTCTCGTGTTAAAAAGACCTTCAGTATGATCCTGCAGGCATGAGGTCAATTTTATAAGCAGCTGGCAAAATTTGAATTAATTATAGAACTGTTGATTTTGAGTTTTTTTTTCACCATAGTTTATTTCGAGCATTGGTTTTAAATCATCAAGCACACGTGTAT]




>consensus_8319#0
CCTCAACCCTTCCAAGCAACCAACCCACCACCACACTCCGGTCCACGCCCTCCACCACCA
CCCGCCGCCGCCGCCGCCCAAAACCCTTCTCCCTCCCGGCGGCCATGGCGTTCCCGTCGC
CGAACTCCCTCTCCGCGGCGTCCCACCCTACGTCCTCCTCCTCCTCCTTCCACCTCCACC
TGCAGCTGCAGCAACCCGTCCCACACCTCCCCTTCCCGCGCTCCCTCCCGCTCAACCTCC
CCGTCCTCCGCCTCGCCCGCCCCCTCCTCCCTCCCACCCCGCTAGCCTCCTCCAGAAGCG
GCGGCATCGGCATCAGCGGCAGAGGCGATGACGACGAGGGTCGCGACAACGCCGGCGGAG
GAGACGGCGGCGACGACAACGCGTCCGTCAACAGGAGGGAAGCGCTGTTCGAGCTGGCGC
AGCTGGGGCGGAAGCTCAAGAGCCTCCCAGCCGACCTCGCCGCGGCCATCGAGGGCGGCC
GCGTCCCCGGGGAGATCGTGCAGCGGTTCGCCGACCTCGAGAAGTCGGGACTCTTCCGCT
GGCTGCTCCAGTTCGGCGGCTTCAAGGAGCGCCTCCTCGCCGACGACCTCTTCCTCGCCA
AGGTCGCCATGGAGTGCGGCGTCGGAATCTTCACCAAGACTGCAGCAGAGTATGAGCGAA
GGAGGGAAAACTTTGTCAAAGAGCTTGACTTTGTGATTGCAGATGTGGTCATGGCAATAG
TTGCAGACTTTATGTTGGTTTGGCTTCCTGCTCCAACAGTGTCTCTGCAGCCACCACTAG
CAGTAAATGCAGGATCTATTGCTAAATTCTTCCACAATTGCCCAGATAATGCCTTCCAGG
TTGCTTTGGCTGGAACATCATACTCCCTTTTGCAGCGCGTAGGAGCTATTATGAGGAATG
GTGCAAAACTTTTTGCAGTGGGAACTAGTGCATCCCTGATTGGAACTGGTGTGACCAATG
CACTGATAAAAGCACGAAAGGCTGTTAGTAAGGATTTTGAAGGGGAAAGCGAGGATATTC
CAATTGTATCAACTAGTGTTGCCTATGGTGTATACATGGCCGTTTCCAGTAACCTCAGGT
ACCAAATCCTGGCTGGAGTGATTGAACAGAGGATGCTCGAGCCATTACTACACCACCACA
AACTAGTGTTGAGTGCACTGTGCTTTGCTGTTCGAACAGGGAACACATTCTTGGGTTCTC
TACTGTGGGTTGACTATGCCAAGTGGATAGGCATACAATAGGTTCGAACTTTGAATATAG
ATCTGAAATTGCGAGTCATTAGCAAATACCATGCAGACTCTGAACACTTACGACTCCCGT
TTGGCGCAAGAAAATCTAGGACAGATTTCGGTTTTTATGGAACTGAAGCCCGAAGGAAAA
GGGTAATTTGTCGAATTCCCATGAACAAGTGATTGGATTGTTAGTGGTGGTTTGTGCGTT
CTGTTTTGTTGAATTGGATTCCTTTGAAGCAATAATTTTGCCGTCATTTATTTGGTGCGC
ACGTTCTTGTGTTTGGGACCATTGCATTCTTTGTTTCGTAACGCACAAGAAGAGGCCTCT
CGTGTTAAAAAGACCTTCAGTATGATCCTGCAGGCATGAGGTCAATTTTATAAGCAGCTG
GCAAAATTTGAATTAATTATAGAACTGTTGATTTTGAGTTTTTTTTTCACCATAGTTTAT
TTCGAGCATTGGTTTTAAATCATCAAGCACACGTGTAT
clustalw multiple alignements is not computed in this case