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Oryza sativa
cluster # 8325 cluster # 8325       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8325#0 length = 797 sequences # 5  

consensusID : consensus_8325#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 797
fasta sequence
                              [TTTTTTCGGTTTGTTGGTTAAATAGCTTCAGCTACAAGATCAACTGTGCACCTTATTCACAACAACCGAACTCTAGTGTTAACCACCACAAATTCCCTTGCATGGTGCCTGTTTCTCTCTCTCTCTTTTTCAATTAATGTTACATATACATGTGCCCCCCAAAAAATGCATAATAGAAATGGCAAACCAAATAGTTACAATCACAGGATCTACAACATCTGGTCCGAAAGAGAAAAAAAAAAGGATTCTGCAGCACCTTCCCCCCATTACACCCAACTCTTTAACCTGGAATGTATCACAATTTTCTGAAGGAAGAGCAGCACGTCTCAACATAAACCTTTGAGCCGCAAAGGAGACTGAGCAGACGCATCTTTAGACCAGAGACGCTCTTGTCTCTTCTCTTCTAGCTGCGAAGCTTCATTCAACATGTCCATAGCATCACTCTGCATATTTAACTTTGAGAGCGCAACAGCTTGCATATAGAATGCGGTTGGCCAATCAGGGTATACGCACTGCGCTTGCATTGCATCCCGGAGGGCAGCATCAGGTTGGTCAGACATGAGGTGGCATAAGCTCCGTCTAGCGTATACCGTTGGTGATACCATTGTTCCCACATCAACAAACTGTGTGTAACACTCTATGGCTGTCTTAAAATCTTTATCACGAAACGCAAAGTCTCCACGTTTCCTAGCATCTAACATATCCCTCATCTGCTGAGTCCATTCCTGGAACGATAGCTCATTAGTCCCTTCATCATCTCTGTAATGTGTGGCAACTAGAATCTGATGGATTGCTGT]

[+] EMBL CA759057             [TTTTTTCGGTTTGTTGGTTAAATAGCTTCAGCTACAAGATCAACTGTGCACCTTATTCACAACAACCGAACTCTAGTGTTAACCACCACAAATTCCCTTGCATGGTGCCTGTTTCTCTCTCT TTTTTTTCAATTAATGTTACATATACATGTGCCCCCCAAAAAATGCATAATAGAAATGGCAAACCAAATAGTTACAATCACAGGATCTACAACATCTGGTCCGAAAGAG  AAAAAAAAGGATTCTGCAGCACCTTCCCCCCATTACACCCAACTCTTTAACCTGGAATGTATCACAATTTTCTGAAGGAAGAGCAGCACGTCTCAACATAAACCTTTGAGCCGCAAAGGAGACTGAGCAGACGCATCTTTAGACCAGAGACGCTCTTGTCTCTTCTCTTCTAGCTGCGAAGCTTCATTCAACATGTCCATAGCATCACTCTGCATATTTAACTTTGAGAGCGCAACAGCTTGCATATAGAATGCGGTTGGCCAATCAGGGTATACGCACTGCGCTTGCATTGCATCCCGGAGGGCAGCATCAGGTTGGTCAGACATGAGGTGGCATAAGCTCCGTCTAGCGTATACCGTTGGTGATACCATTGTTCCCACATCAACANACTGTGTGTAACACTCTATGGCTGTCTTAAAATCTTTATCACGAAACGCANAGTCTCCACGTTTCCTAGCATCTAA                                                                                                   ]
[+] EMBL CB637366             [                                     GATCAACTGTGCACCTTATTCACAACAACCGAACTCTAGTGTTAACCACCACAAATTCCCTTGCATGGTGCCTGTTTCTCTCTCTCTCTTTTTCAATTAATGTTACATATACATGTGCCCCCCAAAAAATGCATAATAGAAATGGCAAACCAAATAGTTACAATCACAGGATCTACAACATCTGGTCCGAAAGAGAAAAAAAAAAGGATTCTGCAGCACCTTCCCCCCATTACACCCAACTCTTTAACCTGGAATGTATCACAATTTTCTGAAGGAAGAGCAGCACGTCTCAACATAAACCTTTGAGCCGCAAAGGAGACTGAGCAGACGCATCTTTAGACCAGAGACGCTCTTGTCTCTTCTCTTCTAGCTGCGAAGCTTCATTCAACATGTCCATAGCATCACTCTGCATATTTAACTTTGAGAGCGCAACAGCTTGCATATAGAATGCGGTTGGCCAATCAGGGTATACGCACTGCGCTTGCATTGCATCCCGGAGGGCAGCATCAGGTTGGTCAGACATGAGGTGGCATAAGCTCCGTCTAGCGTATACCGTTGGTGATACCATTGTTCCCACATCAACAAACTGTGTGTAACACTCTATGGCTGTCTTAAAATCTTTATCACGAAACGCAAAGTCTCCACGTTTCCTAGCATCTAACATATCC                                                                                            ]
[+] EMBL CB669012             [                                                                                   CACCACAAATTCCCTTGCCTTTTGACTGTTTCTCTCTCTCTCTTTTTCAATTAATGTTACATATACATGTGCCCCCCAAAAAATGCATAATAGAAATGGCAAACCAAATAGTTACAATCACAGGATCTACAACATCTGGTCCGAAAGAGAAAAAAAAAAGGATTCTGCAGCACCTTCCCCCCATTACACCCAACTCTTTAACCTGGAATGTATCACAATTTTCTGAAGGAAGAGCAGCACGTCTCAACATAAACCTTTGAGCCGCAAAGGAGACTGAGCAGACGCATCTTTAGACCAGAGACGCTCTTGTCTCTTCTCTTCTAGCTGCGAAGCTTCATTCAACATGTCCATAGCATCACTCTGCATATTTAACTTTGAGAGCGCAACAGCTTGCATATAGAATGCGGTTGGCCAATCAGGGTATACGCACTGCGCTTGCATTGCATCCCGGAGGGCAGCATCAGGTTGGTCAGACATGAGGTGGCATAAGCTCCGTCTAGCGTATACCGTTGGTGATACCATTGTTCCCACATCAACAAACTGTGTGTAACACTCTATGGCTGTCTTAAAATCTTTATCACGAAACGCAAAGTCTCCACGTTTCCTAGCATCTAACATATCCCTCATCTGCTGAGTCCATTCCTGGAACGATAGCTCATTAGTCCCTTCATCATCTCTGTAATGTGTGGCAACTAGAATCTGATGGATTGCTGT]
[+] EMBL CB636093             [                                                                                         AAATTCCCTTGCATGGGGCCTGTTTCTCTCTCTCTCTTTTTCAATTAATGTTACATATACATGTGCCCCCCAAAAAATGCATAATAGAAATGGCAAACCAAATAGTTACAATCACAGGATCTACAACATCTGGTCCGAAAGA AAAATTTTAAAGATTCTGCAGCACCTTCCCCCCATTACACCCAACTCTTTAACCTGGAATGTATCACAATTTTCTGAAGGAAAAACAGCACGTCTCAACATAAACCTTTGAGCCGCAAAGGAAACTGAGCAAACGCATCTTTAGACCAAAAACGCTCTTGTCTCTTCTCTTCTAGCTGCGAAGCTTCATTCAACATGTCCATAGCATCACTCTGCATATTTAACTTTGAGAGCGCAACAGCTTGCATATAGAATGCGGTTGGCCAATCAGGGTATACGCACTGCGCTTGCATT                                                                                                                                                                                                                                                                                ]
[+] EMBL CB668977             [                                                                                                   gcccttTGGCTGATTCTCTCTCTCTCTTTTTCAAATAATGTTACATATACATGGGCCCCCCAAAAAATGCATAATAAAAATGGGAAACCAAATAGTTACAATCACAGGATCTACAAAATCTGGTCCGAAATAAAAAAAAAAAAGGATTCTGCATCACTTTCCCCCCATTACACCCAACTCTTTAACCTGGAATGGATCACAATTTTCTGAAGGAAGAGCATCACGTCTCAACATAAACCTTTGAGCCGCAAAGGAGACTGAGCAGACGCATCTTTAGACCAAAAACGCTCTTGTCTCTTCTCTTCTAGCTGCGAAGCTTCATTCAACATGTCCATAGCATCACTCTGCATATTTAACTTTGAGAGCGCAACAGCTTGCATATAAAATGCGGTTGGCCAATCAGGGTATACCCACTGCGCTTGCATTGCATCCCGGAGGGCAGCATCAGGTTGGTCAGACATGAGGTGGCATAAGCTCCGTCTAGCGTATACCGTTGGTGATACCATTGTTCCCACATCAACAAACTGTGTGTAACACTCTATGGCTGTCTTAAAATCTTTATCACGAAACGCAAAGTCTCCACGTTTCCTAGCATCTAACATATCCCTCATCTGCTGAGTCCATTCCTGGAACGATAGCTCATTAATCCCTTCATCATCTCTGTAATGTGTGGCAAC                     ]


>consensus_8325#0 TTTTTTCGGTTTGTTGGTTAAATAGCTTCAGCTACAAGATCAACTGTGCACCTTATTCAC AACAACCGAACTCTAGTGTTAACCACCACAAATTCCCTTGCATGGTGCCTGTTTCTCTCT CTCTCTTTTTCAATTAATGTTACATATACATGTGCCCCCCAAAAAATGCATAATAGAAAT GGCAAACCAAATAGTTACAATCACAGGATCTACAACATCTGGTCCGAAAGAGAAAAAAAA AAGGATTCTGCAGCACCTTCCCCCCATTACACCCAACTCTTTAACCTGGAATGTATCACA ATTTTCTGAAGGAAGAGCAGCACGTCTCAACATAAACCTTTGAGCCGCAAAGGAGACTGA GCAGACGCATCTTTAGACCAGAGACGCTCTTGTCTCTTCTCTTCTAGCTGCGAAGCTTCA TTCAACATGTCCATAGCATCACTCTGCATATTTAACTTTGAGAGCGCAACAGCTTGCATA TAGAATGCGGTTGGCCAATCAGGGTATACGCACTGCGCTTGCATTGCATCCCGGAGGGCA GCATCAGGTTGGTCAGACATGAGGTGGCATAAGCTCCGTCTAGCGTATACCGTTGGTGAT ACCATTGTTCCCACATCAACAAACTGTGTGTAACACTCTATGGCTGTCTTAAAATCTTTA TCACGAAACGCAAAGTCTCCACGTTTCCTAGCATCTAACATATCCCTCATCTGCTGAGTC CATTCCTGGAACGATAGCTCATTAGTCCCTTCATCATCTCTGTAATGTGTGGCAACTAGA ATCTGATGGATTGCTGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)