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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8327 cluster # 8327       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8327#0 length = 855 sequences # 5  

consensusID : consensus_8327#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 855
fasta sequence
                              [CCGCCCCCCACCGCCAACTTCACCCAGCTCTCCCAGATGTTCGCCGCCAAAGGCCTCGACGCCAAGGACCTCGTCGTCCTCTCCGGCGGCCACACGCTCGGCACGGCGCACTGCGCGCTCTTCTCCGACCGCCTCTACAACTTCACCGGCCTGGTGAACGACGGCGACGTGGACCCGGCGCTGGACGCGGCGTACATGGCGAAGCTCAAGGCCAAGTGCCGGAGCCTGAGCGACAACACCACCCTGTCGGAGATGGACCCCGGCAGCTTCCTCACCTTCGACGCCAGCTACTACCGGCTGGTGGCCAAGCGCCGCGGCATCTTCCACTCCGACTCCGCGCTGCTCACCGATCCCGTCACCAGGGCCTACGTCGAGCGCCAGGCCACCGGCCAC-TTCGCCGACGACTTCTTCCGCGACTTCGCCGACTCCATGGTGAAGATGAGCACCATT-GACGTGCTCACCGGGGC-GCAGGGCGAGATCAGGAACAAGTGCTAC-GCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCT-TCCGTCAATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTAC-AGTACAGATGAACGAATCCATCACTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATGCCAATGGGTTTCTTGTTTTGCTACTTTTTAATTTGTTTTTTGGGGTGCGTGGCATCTATGTTCAACTCTTGTGAATTCATTCATGATATATGTAATAAGTTCAAACGAGAC-ATAACTAAAATATACTCTCTTTCACAAAAAA]

[+] EMBL AK107894             [CCGCCCCCCACCGCCAACTTCACCCAGCTCTCCCAGATGTTCGCCGCCAAAGGCCTCGACGCCAAGGACCTCGTCGTCCTCTCCGGCGGCCACACGCTCGGCACGGCGCACTGCGCGCTCTTCTCCGACCGCCTCTACAACTTCACCGGCCTGGTGAACGACGGCGACGTGGACCCGGCGCTGGACGCGGCGTACATGGCGAAGCTCAAGGCCAAGTGCCGGAGCCTGAGCGACAACACCACCCTGTCGGAGATGGACCCCGGCAGCTTCCTCACCTTCGACGCCAGCTACTACCGGCTGGTGGCCAAGCGCCGCGGCATCTTCCACTCCGACTCCGCGCTGCTCACCGATCCCGTCACCAGGGCCTACGTCGAGCGCCAGGCCACCGGCCAC TTCGCCGACGACTTCTTCCGCGACTTCGCCGACTCCATGGTGAAGATGAGCACCATT GACGTGCTCACCGGGGC GCAGGGCGAGATCAGGAACAAGTGCTAC GCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCT TCCGTCAATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTAC AGTACAGATGAACGAATCCATCACTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATGCCAATGGGTTTC                                                                                                                                   ]
[+] EMBL BM037793             [                                                                                                                                                                                                                                                                                                                                                            tATCCCGTCATCAGGGCCTACGTCGAGCGCCAGGCCACCGGCCAC TTCGCCGACGACTTCTTCCGCGACTTCGCCGACTCCATGGTGAAGATGAGCACCATT GACGTGCTCACCGGGGC GCAGGGCGAGATCAGGAACAAGTGCTAC GCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCTGTCCGTC ATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTAC AGTACAGATGAACGAATCCCTCCCTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATGCC AT GGTTTCTT TTTTGCTAC TTTTAATTTGTTTTTTGGGGTGCGTGGCATCTATGTTC ACTCTTGTGAATTCATTCATGATATATGTAATAAGTTCAAAaaaa                                  ]
[+] EMBL BI810294             [                                                                                                                                                                                                                                                                                                                                                                                              CCACCGCCCACTTTCGCCGACGACTTCTTCCGCGACTTCGCCGACTCCATGGTGAAGATGAGCACCATTGGACGTGCTCACCGGGGCACCAGGGCGAGATCAGGAACAAGTGCTACAGCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCT TCCGTCAATTTTTTGTAATTGGTTTCAGTTTATTT C AAAAAGATCGTGTTAATTT GTTTGGGTACAAGTACAGATGAACGAATCCATCACTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATCCCCATGGGTTTCTTGTTTTGCTACTTTTTAATTTGTTTTTTGGGGTGCGTGGCATCTATGTTCAACTCTTGTGAATTCATTCATGATATATGTAATAAGTTCAAACGAGAC ATAACTAAA                      ]
[+] EMBL AU082069             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGCTCACCGGGGC GCAGGGCGAGATCAGGAACAAGT NTAC GCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCT TCCGTCAATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTAC AGTACAGATGAACGAATCCATCACTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATGCCAATGGGTTTCTTGTTTTGCTACTTTTTAATTTGTTTTTTGGGGTGCGTGGCATCTATGTTCAACTCTTGTGAATTCATTCATGATATATGTAATAAGTTCAAACGAGACAATAACTAAAATATACTCTCTTTCACAAAAAA]
[+] EMBL C20530               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTGAATCTGNATGNATGCGCACTAATCAAAGGTTCGATTTNTTTGGTTTCT TCCGTCAATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTAC AGTACAGATGAACGAATCCATCACTNCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATNCCAATGGGTTTCTTGTTTTGCTAaaaaaa                                                                                                                  ]


>consensus_8327#0 CCGCCCCCCACCGCCAACTTCACCCAGCTCTCCCAGATGTTCGCCGCCAAAGGCCTCGAC GCCAAGGACCTCGTCGTCCTCTCCGGCGGCCACACGCTCGGCACGGCGCACTGCGCGCTC TTCTCCGACCGCCTCTACAACTTCACCGGCCTGGTGAACGACGGCGACGTGGACCCGGCG CTGGACGCGGCGTACATGGCGAAGCTCAAGGCCAAGTGCCGGAGCCTGAGCGACAACACC ACCCTGTCGGAGATGGACCCCGGCAGCTTCCTCACCTTCGACGCCAGCTACTACCGGCTG GTGGCCAAGCGCCGCGGCATCTTCCACTCCGACTCCGCGCTGCTCACCGATCCCGTCACC AGGGCCTACGTCGAGCGCCAGGCCACCGGCCACTTCGCCGACGACTTCTTCCGCGACTTC GCCGACTCCATGGTGAAGATGAGCACCATTGACGTGCTCACCGGGGCGCAGGGCGAGATC AGGAACAAGTGCTACGCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCAC TAATCAAAGGTTCGATTTATTTGGTTTCTTCCGTCAATTTTTTTTAATTGGTTTCAGTTT ATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTACAGTACAGATGAACGAATCCATCA CTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATGCCAATGG GTTTCTTGTTTTGCTACTTTTTAATTTGTTTTTTGGGGTGCGTGGCATCTATGTTCAACT CTTGTGAATTCATTCATGATATATGTAATAAGTTCAAACGAGACATAACTAAAATATACT CTCTTTCACAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)