These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8327#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 855 fasta sequence [CCGCCCCCCACCGCCAACTTCACCCAGCTCTCCCAGATGTTCGCCGCCAAAGGCCTCGACGCCAAGGACCTCGTCGTCCTCTCCGGCGGCCACACGCTCGGCACGGCGCACTGCGCGCTCTTCTCCGACCGCCTCTACAACTTCACCGGCCTGGTGAACGACGGCGACGTGGACCCGGCGCTGGACGCGGCGTACATGGCGAAGCTCAAGGCCAAGTGCCGGAGCCTGAGCGACAACACCACCCTGTCGGAGATGGACCCCGGCAGCTTCCTCACCTTCGACGCCAGCTACTACCGGCTGGTGGCCAAGCGCCGCGGCATCTTCCACTCCGACTCCGCGCTGCTCACCGATCCCGTCACCAGGGCCTACGTCGAGCGCCAGGCCACCGGCCAC-TTCGCCGACGACTTCTTCCGCGACTTCGCCGACTCCATGGTGAAGATGAGCACCATT-GACGTGCTCACCGGGGC-GCAGGGCGAGATCAGGAACAAGTGCTAC-GCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCT-TCCGTCAATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTAC-AGTACAGATGAACGAATCCATCACTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATGCCAATGGGTTTCTTGTTTTGCTACTTTTTAATTTGTTTTTTGGGGTGCGTGGCATCTATGTTCAACTCTTGTGAATTCATTCATGATATATGTAATAAGTTCAAACGAGAC-ATAACTAAAATATACTCTCTTTCACAAAAAA] [+] EMBL AK107894 [CCGCCCCCCACCGCCAACTTCACCCAGCTCTCCCAGATGTTCGCCGCCAAAGGCCTCGACGCCAAGGACCTCGTCGTCCTCTCCGGCGGCCACACGCTCGGCACGGCGCACTGCGCGCTCTTCTCCGACCGCCTCTACAACTTCACCGGCCTGGTGAACGACGGCGACGTGGACCCGGCGCTGGACGCGGCGTACATGGCGAAGCTCAAGGCCAAGTGCCGGAGCCTGAGCGACAACACCACCCTGTCGGAGATGGACCCCGGCAGCTTCCTCACCTTCGACGCCAGCTACTACCGGCTGGTGGCCAAGCGCCGCGGCATCTTCCACTCCGACTCCGCGCTGCTCACCGATCCCGTCACCAGGGCCTACGTCGAGCGCCAGGCCACCGGCCAC TTCGCCGACGACTTCTTCCGCGACTTCGCCGACTCCATGGTGAAGATGAGCACCATT GACGTGCTCACCGGGGC GCAGGGCGAGATCAGGAACAAGTGCTAC GCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCT TCCGTCAATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTAC AGTACAGATGAACGAATCCATCACTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATGCCAATGGGTTTC ] [+] EMBL BM037793 [ tATCCCGTCATCAGGGCCTACGTCGAGCGCCAGGCCACCGGCCAC TTCGCCGACGACTTCTTCCGCGACTTCGCCGACTCCATGGTGAAGATGAGCACCATT GACGTGCTCACCGGGGC GCAGGGCGAGATCAGGAACAAGTGCTAC GCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCTGTCCGTC ATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTAC AGTACAGATGAACGAATCCCTCCCTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATGCC AT GGTTTCTT TTTTGCTAC TTTTAATTTGTTTTTTGGGGTGCGTGGCATCTATGTTC ACTCTTGTGAATTCATTCATGATATATGTAATAAGTTCAAAaaaa ] [+] EMBL BI810294 [ CCACCGCCCACTTTCGCCGACGACTTCTTCCGCGACTTCGCCGACTCCATGGTGAAGATGAGCACCATTGGACGTGCTCACCGGGGCACCAGGGCGAGATCAGGAACAAGTGCTACAGCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCT TCCGTCAATTTTTTGTAATTGGTTTCAGTTTATTT C AAAAAGATCGTGTTAATTT GTTTGGGTACAAGTACAGATGAACGAATCCATCACTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATCCCCATGGGTTTCTTGTTTTGCTACTTTTTAATTTGTTTTTTGGGGTGCGTGGCATCTATGTTCAACTCTTGTGAATTCATTCATGATATATGTAATAAGTTCAAACGAGAC ATAACTAAA ] [+] EMBL AU082069 [ TGCTCACCGGGGC GCAGGGCGAGATCAGGAACAAGT NTAC GCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCT TCCGTCAATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTAC AGTACAGATGAACGAATCCATCACTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATGCCAATGGGTTTCTTGTTTTGCTACTTTTTAATTTGTTTTTTGGGGTGCGTGGCATCTATGTTCAACTCTTGTGAATTCATTCATGATATATGTAATAAGTTCAAACGAGACAATAACTAAAATATACTCTCTTTCACAAAAAA] [+] EMBL C20530 [ CTGAATCTGNATGNATGCGCACTAATCAAAGGTTCGATTTNTTTGGTTTCT TCCGTCAATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTAC AGTACAGATGAACGAATCCATCACTNCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATNCCAATGGGTTTCTTGTTTTGCTAaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||