cluster # 8333

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Oryza sativa
cluster # 8333 cluster # 8333 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8333#0 length = 2526 sequences # 5
consensusID : consensus_8333#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2526
fasta sequence
                              [CTGGGCTTCTTTCGGCCCAATCTCTCTCCCGTCGAGCCGGCCGCCTCCGCCGCTGGGGCGTTCCACTTCCCGACGGGCGCAGGCGGCCGGCGTCGACTCTCTCCTGTCCAACACCATAGTTGTGGCGGCCGATGCTATCGTTAAGGATCGCGGCCGCCTCGCGCCTGCGAGGGCTGCTGGGCGGCGGCGCAGCGACCGGGGCGCGCACACGCGCCTTCTCCTATGGGAGGGTGGTGGATGCCGCTGCCCGGGACGGCGAGCTCCGAGTTTTCGTGGTCGCCGGTGAGGTCTCAGGCGACTCGCTCGCCTCGCGCCTCATGGCGTCTCTCAGGGCGCTCTCACCGGTCCCCGTCCGTTTTGCTGGTGTTGGCGGGGAATTAATGCGCAATAAAGGCTTGCAGTCACTTTTTCCCATGGAGGAAATTTCCATAATGGGATTGTGGGAACTGCTGCCACACATATATAATATCAAGAGGAAGATTGAGGATACTGCAGATGCTGCTGTATTGTTTCAGCCTCATGCTGTAGTTACTGTTGATTCAAAGGGGTTCTCTTTTCGCCTCCTGAAGCAATTGAAATGTAGATACAATCAAGTTGCCCGTCCTCTACATGTCCACTATGTTGCACCATCATTCTGGGCCTGGAAAGATGGTGAAAGAAGGCTTGCAAAGTTGCATAATTTTGTGGACCATTTGTTGTGTATCCTTCCATTTGAGGAAGAAATTTGCAGATTAAATGGGTTGCCTGCTACATATGTGGGCCATCCATTATTGGATGATGCTATTGGCTTGAATATGGAGAAGGAACTATCTTCTGTCAATTCCATGCATCAACGAAGTGGTGAAGATTTTCGACAGGAGCATGAAATTTCCCCAGATTCCACAATCATAACCATACTGCCTGGAAGCAGGATGCAGGAGGTAGCCCGTATGCTTCCCATCTTCTTGCAAACTGTGCAACACCTAAGTCATACATTTAATGAACTGTCACTGGTCATCCCAGTTGCTCCTCATCGGGATGTGAGGGTATATGTTGATAATGTTGTTCGATCAGGGCCATTTCCAGTGGTACTGATAACTGGGGAAACACTAAAAGAAAGATATGATGCATTCAATGCTAGTAGAGCAGCATTATGCACTTCAGGAACAGCTGTCATGGAGCTGATGTTAGCAAAGCTACCCTGCGTGGTAGCTTACCGGGCTCATTTCATCACGGAATGTTTGATTCATCTGAGGAAAAAGATAGACTTTATTTCTCTACCCAACATTCTTTTAAACTCTCCAATTGTCCCTGAGATCCTTTTTGGGGCTTGCACAGCGGAAAATCTAGCTGCAAAACTAAGTGAGGTCATTTGTAATGATGAAGCCCGTCAGCTCCAAGTTGAATCAGCTGAACAGTTACTGGAGATGCTTTATGAACCTATCAAGCAACGAGGTGGCCTATTTCAAGAGGAGCTGCACAACTCGAGCCTGCCGTCAAATATCTACTCCCCAAGCACGATTGCAGCATTGACAGTGCTTTATACAGATAACCATCAACAAGCGGTGCACCAGAATTGAGTGGATGTCCTCAGTAGCAGACAAATATTTTTATCAGCCGTGATGGTCGCTATTGCGTGCAATCTCATCTTCTCCGTCTGCTGTTCGTGATGAAGAGTGTACTTTCTGCAGATCCTATTGGCTGCCCTAGGCCCACAATTGGAGAGGCAAAACGAGTTTTTAGGTAAAAAAGGCTTTTCAGTTCTTGGTTTCTGATTCTGAAGTGCCGCATGAAGTCAGGTCAGCATCGTATTATCATTATGGAGGATGGGAACGCATGTGTTCTGGTGGGTTTAGTGCGGGTCCTGGTCATCATTCTGCGATGATGCGTTTGGCGCAAGATTCTTCCATGGTTAGAATTTCCTGGAGTGAACAGTTGGCAGTTGATATGTGAGAACAATTACAAGAGATTTTTCGGATGGTTTTGATACTTTCATGGTCATCGAAATTACGAGATGAAGTATGAACGGATGCACAGTAACGTCATCAGGTCTGGGCTTGCTTGATGGCTGCTCTAGCCATAGAGGATCCTCGGTCAGTGAGAAAGCATAGATTCCCACGTAGCCGGCGATCACGTCACGGCTGAGCTCATCTAGGTGGTGGCCCATGCACGAGACGGCGAATCTTCCATGGAAAATATTTCGAAAATTGTTGCTTCGGTTTTAATTACAAGTTGCCGGCATTGCCAGTGTTCCACTTGGGAATATCTAACGCTTTTCTTATAACGATTTTACCTGCCAACTGCAGCATGGCATGGGGAAAAGTCTTGAGCCATCGTGTACTTAAATTGTGTAATCATCTGGTGCCACTAGCTATCCGTGAACTTCAGGAGTAAGTTGATCTAGAATGGTGACTGGTCAATGGAGGCCTTGTAATTGTAATTTGTAAAACAATCTAATGATGTAACATCTCAAGGCATTGCCAGTGTGGTCGCGGTGCATGGATTCGTTTCCCTGGCATCTCGGTAAGAAACAGTAATATTTCAGTA]

[+] EMBL AK100905             [CTGGGCTTCTTTCGGCCCAATCTCTCTCCCGTCGAGCCGGCCGCCTCCGCCGCTGGGGCGTTCCACTTCCCGACGGGCGCAGGCGGCCGGCGTCGACTCTCTCCTGTCCAACACCATAGTTGTGGCGGCCGATGCTATCGTTAAGGATCGCGGCCGCCTCGCGCCTGCGAGGGCTGCTGGGCGGCGGCGCAGCGACCGGGGCGCGCACACGCGCCTTCTCCTATGGGAGGGTGGTGGATGCCGCTGCCCGGGACGGCGAGCTCCGAGTTTTCGTGGTCGCCGGTGAGGTCTCAGGCGACTCGCTCGCCTCGCGCCTCATGGCGTCTCTCAGGGCGCTCTCACCGGTCCCCGTCCGTTTTGCTGGTGTTGGCGGGGAATTAATGCGCAATAAAGGCTTGCAGTCACTTTTTCCCATGGAGGAAATTTCCATAATGGGATTGTGGGAACTGCTGCCACACATATATAATATCAAGAGGAAGATTGAGGATACTGCAGATGCTGCTGTATTGTTTCAGCCTCATGCTGTAGTTACTGTTGATTCAAAGGGGTTCTCTTTTCGCCTCCTGAAGCAATTGAAATGTAGATACAATCAAGTTGCCCGTCCTCTACATGTCCACTATGTTGCACCATCATTCTGGGCCTGGAAAGATGGTGAAAGAAGGCTTGCAAAGTTGCATAATTTTGTGGACCATTTGTTGTGTATCCTTCCATTTGAGGAAGAAATTTGCAGATTAAATGGGTTGCCTGCTACATATGTGGGCCATCCATTATTGGATGATGCTATTGGCTTGAATATGGAGAAGGAACTATCTTCTGTCAATTCCATGCATCAACGAAGTGGTGAAGATTTTCGACAGGAGCATGAAATTTCCCCAGATTCCACAATCATAACCATACTGCCTGGAAGCAGGATGCAGGAGGTAGCCCGTATGCTTCCCATCTTCTTGCAAACTGTGCAACACCTAAGTCATACATTTAATGAACTGTCACTGGTCATCCCAGTTGCTCCTCATCGGGATGTGAGGGTATATGTTGATAATGTTGTTCGATCAGGGCCATTTCCAGTGGTACTGATAACTGGGGAAACACTAAAAGAAAGATATGATGCATTCAATGCTAGTAGAGCAGCATTATGCACTTCAGGAACAGCTGTCATGGAGCTGATGTTAGCAAAGCTACCCTGCGTGGTAGCTTACCGGGCTCATTTCATCACGGAATGTTTGATTCATCTGAGGAAAAAGATAGACTTTATTTCTCTACCCAACATTCTTTTAAACTCTCCAATTGTCCCTGAGATCCTTTTTGGGGCTTGCACAGCGGAAAATCTAGCTGCAAAACTAAGTGAGGTCATTTGTAATGATGAAGCCCGTCAGCTCCAAGTTGAATCAGCTGAACAGTTACTGGAGATGCTTTATGAACCTATCAAGCAACGAGGTGGCCTATTTCAAGAGGAGCTGCACAACTCGAGCCTGCCGTCAAATATCTACTCCCCAAGCACGATTGCAGCATTGACAGTGCTTTATACAGATAACCATCAACAAGCGGTGCACCAGAATTGAGTGGATGTCCTCAGTAGCAGACAAATATTTTTATCAGCCGTGATGGTCGCTATTGCGTGCAATCTCATCTTCTCCGTCTGCTGTTCGTGATGAAGAGTGTACTTTCTGCAGATCCTATTGGCTGCCCTAGGCCCACAATTGGAGAGGCAAAACGAGTTTTTAGGTAAAAAAGGCTTTTCAGTTCTTGGTTTCTGATTCTGAAGTGCCGCATGAAGTCAGGTCAGCATCGTATTATCATTATGGAGGATGGGAACGCATGTGTTCTGGTGGGTTTAGTGCGGGTCCTGGTCATCATTCTGCGATGATGCGTTTGGCGCAAGATTCTTCCATGGTTAGAATTTCCTGGAGTGAACAGTTGGCAGTTGATATGTGAGAACAATTACAAGAGATTTTTCGGATGGTTTTGATACTTTCATGGTCATCGAAATTACGAGATGAAGTATGAACGGATGCACAGTAACGTCATCAGGTCTGGGCTTGCTTGATGGCTGCTCTAGCCATAGAGGATCCTCGGTCAGTGAGAAAGCATAGATTCCCACGTAGCCGGCGATCACGTCACGGCTGAGCTCATCTAGGTGGTGGCCCATGCACGAGACGGCGAATCTTCCATGGAAAATATTTCGAAAATTGTTGCTTCGGTTTTAATTACAAGTTGCCGGCATTGCCAGTGTTCCACTTGGGAATATCTAACGCTTTTCTTATAACGATTTTACCTGCCAACTGCAGCATGGCATGGGGAAAAGTCTTGAGCCATCGTGTACTTAAATTGTGTAATCATCTGGTGCCACTAGCTATCCGTGAACTTCAGGAGTAAGTTGATCTAGAATGGTGACTGGTCAATGGAGGCCTTGTAATTGTAATTTGTAAAACAATCTAATGATGTAACATCTCAAGGCATTGCCAGTGTGGTCGCGGTGCATGGATTCGTTTCCCTGGCATCTCGGTAAGAAACAGTAATATTTCAGTA]
[+] EMBL CB664616             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCTGTCAATTCCATGCATCAACGAAGTGGTGAAGATTTTCGACAGGAGCATGAAATTTCCCCAGATTCCACAATCATAACCATACTGCCTGGAAGCAGGATGCAGGAGGTAGCCCGTATGCTTCCCATCTTCTTGCAAACTGTGCAACACCTAAGTCATACATTTAATGAACTGTCACTGGTCATCCCAGTTGCTCCTCATCGGGATGTGAGGGTATATGTTGATAATGTTGTTCGATCAGGGCCATTTCCAGTGGTACTGATAACTGGGGAAACACTAAAAGAAAGATATGATGCATTCAATGCTAGTAGAGCAGCATTATGCACTTCAGGAACAGCTGTCATGGAGCTGATGTTAGCAAAGCTACCCTGCGTGGTAGCTTACCGGGCTCATTTCATCACGGAATGTTTGATTCATCTGAGGAAAAAGATAGACTTTATTTCTCTACCCAACATTCTTTTAAACTCTCCAATTGTCCCTGAGATCCTTTTTGGGGCTTGCACAGCGGAAAATCTAGCTGCAAAACTAAGTGAGGTCATTTGTAATGATGAAGCCCGTCAGCTCCAAGTTGAATCAGCTGAACAGTTACTGGAGATGCTTTATGAACCTATCAAGCAACGAGGTGGCCTATTTCAAGAGGAGCTGCACAACTCGAGCCTGCCGTCAAATATCTACTCCCCAAGCACGATTGCAGCATTGACAGTGCTTTATACAGATAACCATCAACAAGCGGTGCACCAGAATTGAGTGGATGTCCTCAGTAGCAGACAAATATTTTTATCAGCCGTGATGGTCGCTATTGCGTGCAATCTCATCTTCTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF304715             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCGAGCCTGCCGTCAAATATCTACTCCCCAAGCACGATTGCAGCATTGACAGTGCTTTATACAGATAACCATCAACAAGCGGTGCACCAGAATTGAGTGGATGTCCTCAGTAGCAGACAAATATTTTTATCAGCCGTGATGGTCGCTATTGCGTGCAATCTCATCTTCTCCGTCTGCTGTTCGTGATGAAGAGTGTACTTTCTGCAGATCCTATTGGCTGCCCTAGGCCCACAATTGGAGAGGCAAAACGAGTTTTTAGGTAAAAAAGGCTTTTCAGTTCTTGGTTTCTGATTCTGAAGTGCCGCATGAAGTCAGGTCAGCATCGTATTATCATTATGGAGGATGGGAACGCATGTGTTCTGGTGGGTTTAGTGCGGGTCCTGGTCATCATTCTGCGATGATGCGTTTGGCGCAAGATTCTTCCATGGTTAGAATTTCCTGGAGTGAACAGTTGGCAGTTGATATGTGAGAACAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA765757             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGCTTTT AGTTCTTGGTTTCTGATTCTGAAGTGCCGCATGAAGTCAGGTCAGCATCGTATTATCATTATGGAGGATGGGAACGCATGTGTTCTGGTGGGTTTAGTGCGGGTCCTGGTCATCATTCTGCGATGATGCGTTTGGCGCAAGATTCTTCCATGGTTAGAATTTCCTGGAGTGAACAGTTGGCAGTTGATATGTGAGAACAATTACAAGAGATTTTTCGGATGGTTTTGATACTTTCATGGTCATCGAGATTACGAGATGAAGTATGAACGGATGCACAGTAACGTCATCAGGTCTGGGCTTGCTTGATGGCTGCTCTAGCCATAGAGGATCCTCGGTCAGTGAGAAAGCATAGATTCCCACGTAGCCGGCGATCACGTCACGGCTGAGCTCATCTAGGTGGTGGCCCATGCATGAGACGGCGAATCTTCCATGGAAAATATTTCGAAAATTGTTGCTTCGGTTTTAATTACAAGTTGCCGGCATTGCCAGTGTTCCACTTGGGAATATCTAACTCTTTTCTTATAACGATTTTACCTGCCAACTGCAGGATGGCATGGGGAAAAGTTTTGAGCCATCGTGTACTTAAATTGTGTAATCATCTGGTGCCACTAGCTATCCGTGAACTTCAGGAGTAAGTTGATCTAGAATGGTGACTGGTCAATGGAGGCCTTGTAATTGTAATTTGTAAAACAATCTAATGATGTAACATCTCAAGGCATTG                                                                   ]
[-] EMBL CB664617             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTTCAGTTCTTGGTTTCTGATTCTGAAGTGCCGCATGAAGTCAGGTCAGCATCGTATTATCATTATGGAGGATGGGAACGCATGTGTTCTGGTGGGTTTAGTGCGGGTCCTGGTCATCATTCTGCGATGATGCGTTTGGCGCAAGATTCTTCCATGGTTAGAATTTCCTGGAGTGAACAGTTGGCAGTTGATATGTGAGAACAATTACAAGAGATTTTTCGGATGGTTTTGATACTTTCATGGTCATCGAAATTACGAGATGAAGTATGAACGGATGCACAGTAACGTCATCAGGTCTGGGCTTGCTTGATGGCTGCTCTAGCCATAGAGGATCCTCGGTCAGTGAGAAAGCATAGATTCCCACGTAGCCGGCGATCACGTCACGGCTGAGCTCATCTAGGTGGTGGCCCATGCACGAGACGGCGAATCTTCCATGGAAAATATTTCGAAAATTGTTGCTTCGGTTTTAATTACAAGTTGCCGGCATTGCCAGTGTTCCACTTGGGAATATCTAACGCTTTTCTTATAACGATTTTACCTGCCAACTGCAGCATGGCATGGGGAAAAGTCTTGAGCCATCGTGTACTTAAATTGTGTAATCATCTGGTGCCACTAGCTATCCGTGAACTTCAGGAGTAAGTTGATCTAGAATGGTGACTGGTCAATGGAGGCCTTGTAATTGTAATTTGTAAAACAATCTAATGATGTAACATCTCAAGGCATTGCCAGTGTGGTCGCGGTGCATGGATTCGTTTCCCTGGCATCTCGGTAAGAAACAGTAA          ]




>consensus_8333#0
CTGGGCTTCTTTCGGCCCAATCTCTCTCCCGTCGAGCCGGCCGCCTCCGCCGCTGGGGCG
TTCCACTTCCCGACGGGCGCAGGCGGCCGGCGTCGACTCTCTCCTGTCCAACACCATAGT
TGTGGCGGCCGATGCTATCGTTAAGGATCGCGGCCGCCTCGCGCCTGCGAGGGCTGCTGG
GCGGCGGCGCAGCGACCGGGGCGCGCACACGCGCCTTCTCCTATGGGAGGGTGGTGGATG
CCGCTGCCCGGGACGGCGAGCTCCGAGTTTTCGTGGTCGCCGGTGAGGTCTCAGGCGACT
CGCTCGCCTCGCGCCTCATGGCGTCTCTCAGGGCGCTCTCACCGGTCCCCGTCCGTTTTG
CTGGTGTTGGCGGGGAATTAATGCGCAATAAAGGCTTGCAGTCACTTTTTCCCATGGAGG
AAATTTCCATAATGGGATTGTGGGAACTGCTGCCACACATATATAATATCAAGAGGAAGA
TTGAGGATACTGCAGATGCTGCTGTATTGTTTCAGCCTCATGCTGTAGTTACTGTTGATT
CAAAGGGGTTCTCTTTTCGCCTCCTGAAGCAATTGAAATGTAGATACAATCAAGTTGCCC
GTCCTCTACATGTCCACTATGTTGCACCATCATTCTGGGCCTGGAAAGATGGTGAAAGAA
GGCTTGCAAAGTTGCATAATTTTGTGGACCATTTGTTGTGTATCCTTCCATTTGAGGAAG
AAATTTGCAGATTAAATGGGTTGCCTGCTACATATGTGGGCCATCCATTATTGGATGATG
CTATTGGCTTGAATATGGAGAAGGAACTATCTTCTGTCAATTCCATGCATCAACGAAGTG
GTGAAGATTTTCGACAGGAGCATGAAATTTCCCCAGATTCCACAATCATAACCATACTGC
CTGGAAGCAGGATGCAGGAGGTAGCCCGTATGCTTCCCATCTTCTTGCAAACTGTGCAAC
ACCTAAGTCATACATTTAATGAACTGTCACTGGTCATCCCAGTTGCTCCTCATCGGGATG
TGAGGGTATATGTTGATAATGTTGTTCGATCAGGGCCATTTCCAGTGGTACTGATAACTG
GGGAAACACTAAAAGAAAGATATGATGCATTCAATGCTAGTAGAGCAGCATTATGCACTT
CAGGAACAGCTGTCATGGAGCTGATGTTAGCAAAGCTACCCTGCGTGGTAGCTTACCGGG
CTCATTTCATCACGGAATGTTTGATTCATCTGAGGAAAAAGATAGACTTTATTTCTCTAC
CCAACATTCTTTTAAACTCTCCAATTGTCCCTGAGATCCTTTTTGGGGCTTGCACAGCGG
AAAATCTAGCTGCAAAACTAAGTGAGGTCATTTGTAATGATGAAGCCCGTCAGCTCCAAG
TTGAATCAGCTGAACAGTTACTGGAGATGCTTTATGAACCTATCAAGCAACGAGGTGGCC
TATTTCAAGAGGAGCTGCACAACTCGAGCCTGCCGTCAAATATCTACTCCCCAAGCACGA
TTGCAGCATTGACAGTGCTTTATACAGATAACCATCAACAAGCGGTGCACCAGAATTGAG
TGGATGTCCTCAGTAGCAGACAAATATTTTTATCAGCCGTGATGGTCGCTATTGCGTGCA
ATCTCATCTTCTCCGTCTGCTGTTCGTGATGAAGAGTGTACTTTCTGCAGATCCTATTGG
CTGCCCTAGGCCCACAATTGGAGAGGCAAAACGAGTTTTTAGGTAAAAAAGGCTTTTCAG
TTCTTGGTTTCTGATTCTGAAGTGCCGCATGAAGTCAGGTCAGCATCGTATTATCATTAT
GGAGGATGGGAACGCATGTGTTCTGGTGGGTTTAGTGCGGGTCCTGGTCATCATTCTGCG
ATGATGCGTTTGGCGCAAGATTCTTCCATGGTTAGAATTTCCTGGAGTGAACAGTTGGCA
GTTGATATGTGAGAACAATTACAAGAGATTTTTCGGATGGTTTTGATACTTTCATGGTCA
TCGAAATTACGAGATGAAGTATGAACGGATGCACAGTAACGTCATCAGGTCTGGGCTTGC
TTGATGGCTGCTCTAGCCATAGAGGATCCTCGGTCAGTGAGAAAGCATAGATTCCCACGT
AGCCGGCGATCACGTCACGGCTGAGCTCATCTAGGTGGTGGCCCATGCACGAGACGGCGA
ATCTTCCATGGAAAATATTTCGAAAATTGTTGCTTCGGTTTTAATTACAAGTTGCCGGCA
TTGCCAGTGTTCCACTTGGGAATATCTAACGCTTTTCTTATAACGATTTTACCTGCCAAC
TGCAGCATGGCATGGGGAAAAGTCTTGAGCCATCGTGTACTTAAATTGTGTAATCATCTG
GTGCCACTAGCTATCCGTGAACTTCAGGAGTAAGTTGATCTAGAATGGTGACTGGTCAAT
GGAGGCCTTGTAATTGTAATTTGTAAAACAATCTAATGATGTAACATCTCAAGGCATTGC
CAGTGTGGTCGCGGTGCATGGATTCGTTTCCCTGGCATCTCGGTAAGAAACAGTAATATT
TCAGTA
clustalw multiple alignements is not computed in this case