These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8347#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1772 fasta sequence [CAGACAGGATCCACAATTTGCGCCTCTCATCAATTTGTTTCCTGGTACATCCTCTGAACTAACTGTGCCTCAAAAACCTGCGAAGGCACCTGTTCTCCGTCTTGATGCTCAGGGTAGGGAAATTGATGAACATGGGAATGTTATCAACATGACCAAGCCAACCAATTTGAGCACTCTAAAAGTTAACATAAATAAGCAAAAGAAGGAAGCTTTCCAAATAATCAAACCAGACTTGGATTCCCTTGCAAAATCAAGTGCACACTTTGATGAAAGGATGGGCATCAACCAAAACAAGCTCCTCCGCCCTAGAAGGCCTGGATTTCAGTTTATTGAGGAGGGAAAACTTTCAAGGCAAGCTGAGCTGCAGAGAATTAAGAATCAATTTGGTGAAGCACAAGCTAAAGAACTTAAAGTAAAACAAGCTCAACTTGCAAAGGCAAAGGCAGAAGTAGTCATGAACCCGAACTTGATTGAAGTTGCTCCTGGGAGGCCTCCAAAGCAAAAGCAGAAGGAAGAGATTCCTGAAATTGAGCCATGGGATGCAAAAATTTTACCTTCTACAACATACGACGATTTCTCCATGGAGAAGGTTAATATGGAAAAAATCACTATATATGTAGAGCATCCAGAGCCACTGGAGCCACCAGCTGAGCCTGCACCACCACCGCCTCAGCCACTTAAGCTGACTAAGAAGGAGCAGAAGAAACTCAGAACACAAAGGCGCCTTGCTAAAGAGAAAGACAGGCAAGAAATGATCAGGCAAGGCCTCTTGGAGCCACCAAAGCCCAAGGTCAAGATGAGCAATCTTATGAAAGTACTAGGAGCTGAAGCTACACAGGATCCAACACGTATGGAGTTGGAAATACGGACTGCTGCTGCAGAGCGTGAGCAGGCTCATGTAGATCGCAACATTGCTCGCAAGCTCACTCCATCAGAGCGCCGTGAAAAGAAAGAGAGGAAGCTTTTTGAAGATCCTAACACATTGGAGACTATAGTTTGTGTGTACAGAATCAGAGACCTGTCACATCCGCAGACACGTTTTAAGGTGGATGTAAATGCACAAGAGAACCGTCTTACTGGTGCTGCAGTCATTGCGGATGGGATCAGTGTTGTTGTCGTTGAAGGAGGGAAGAAGTCAATCAAAAGGTACAATAAGCTGATGCTGAACCGTATTGACTGGGCTGCTGCGGTTGATGATGATGATGATGCTGATGAGGAATCAGACAAGCCTGTGAATAGCTGTGCATTGGTCTGGCAGGGGAGTGTGGCAAAACCCTGCTTTACCAGGTTCAGTGTACACAATTGCCGTAGTGAGGCTGCTGCCAAGAAGGTGTTTGCAGATGCTTCAGTTCCACACTACTGGGACCTGGCTGTCAATTTCTCAGAAGATTCATCTTGAGCTGAGCTTCTGTTCAGAACATGGAGGCGCCTGCTGTTGAAACCCCTGCCTAGGGATTACGATGTTCAATTCTCATGCAGTAAGTGATGAGTAGTAGCTAATTTCTCACCGTGGGTAAGTGTCCTCTTCAAGTTACGTACAAGCCTTATTACTTGCTCTGGAAGCATTTGTGGACTGAGTAATACTTCGTACTGTCATGAACATACCCTTGTAAGGGACTGCTGATCTTTTCGTTGCGGGATTTACTCATGTGAGCTAGAAACTGAATGCATGGAGGAACTGTTGAAATTTTTGCAGTATAAGCTTCCAACTATATCTGGACTGCTCAGGCCTTGAATATTGTTATGGGAATTGTGTTAATGAAAGTATGTAT] [+] EMBL AK059394 [CAGACAGGATCCACAATTTGCGCCTCTCATCAATTTGTTTCCTGGTACATCCTCTGAACTAACTGTGCCTCAAAAACCTGCGAAGGCACCTGTTCTCCGTCTTGATGCTCAGGGTAGGGAAATTGATGAACATGGGAATGTTATCAACATGACCAAGCCAACCAATTTGAGCACTCTAAAAGTTAACATAAATAAGCAAAAGAAGGAAGCTTTCCAAATAATCAAACCAGACTTGGATTCCCTTGCAAAATCAAGTGCACACTTTGATGAAAGGATGGGCATCAACCAAAACAAGCTCCTCCGCCCTAGAAGGCCTGGATTTCAGTTTATTGAGGAGGGAAAACTTTCAAGGCAAGCTGAGCTGCAGAGAATTAAGAATCAATTTGGTGAAGCACAAGCTAAAGAACTTAAAGTAAAACAAGCTCAACTTGCAAAGGCAAAGGCAGAAGTAGTCATGAACCCGAACTTGATTGAAGTTGCTCCTGGGAGGCCTCCAAAGCAAAAGCAGAAGGAAGAGATTCCTGAAATTGAGCCATGGGATGCAAAAATTTTACCTTCTACAACATACGACGATTTCTCCATGGAGAAGGTTAATATGGAAAAAATCACTATATATGTAGAGCATCCAGAGCCACTGGAGCCACCAGCTGAGCCTGCACCACCACCGCCTCAGCCACTTAAGCTGACTAAGAAGGAGCAGAAGAAACTCAGAACACAAAGGCGCCTTGCTAAAGAGAAAGACAGGCAAGAAATGATCAGGCAAGGCCTCTTGGAGCCACCAAAGCCCAAGGTCAAGATGAGCAATCTTATGAAAGTACTAGGAGCTGAAGCTACACAGGATCCAACACGTATGGAGTTGGAAATACGGACTGCTGCTGCAGAGCGTGAGCAGGCTCATGTAGATCGCAACATTGCTCGCAAGCTCACTCCATCAGAGCGCCGTGAAAAGAAAGAGAGGAAGCTTTTTGAAGATCCTAACACATTGGAGACTATAGTTTGTGTGTACAGAATCAGAGACCTGTCACATCCGCAGACACGTTTTAAGGTGGATGTAAATGCACAAGAGAACCGTCTTACTGGTGCTGCAGTCATTGCGGATGGGATCAGTGTTGTTGTCGTTGAAGGAGGGAAGAAGTCAATCAAAAGGTACAATAAGCTGATGCTGAACCGTATTGACTGGGCTGCTGCGGTTGATGATGATGATGATGCTGATGAGGAATCAGACAAGCCTGTGAATAGCTGTGCATTGGTCTGGCAGGGGAGTGTGGCAAAACCCTGCTTTACCAGGTTCAGTGTACACAATTGCCGTAGTGAGGCTGCTGCCAAGAGGGTGTTTGCAGATGCTTCAGTTCCACACTACTGGGACCTGGCTGTCAATTTCTCAGAAGATTCATCTTGAGCTGAGCTTCTGTTCAGAACATGGAGGCGCCTGCTGTTGAAACCCCTGCCTAGGGATTACGATGTTCAATTCTCATGCAGTAAGTGATGAGTAGTAGCTAATTTCTCACCGTGGGTAAGTGTCCTCTTCAAGTTACGTACAAGCCTTATTACTTGCTCTGGAAGCATTTGTGGACTGAGTAATACTTCGTACTGTCATGAACATACCCTTGTAAGGGACTGCTGATCTTTTCGTTGCGGGATTTACTCATGTGAGCTAGAAACTGAATGCATGGAGGAACTGTTGAAATTTTTGCAGTATAA ] [+] EMBL CB639637 [ CCTTGCAAAATCAAGTGCACACTTTGATGAAAGGATGGGCATCAACCAAAACAAGCTCCTCCGCCCTAGAAGGCCTGGATTTCAGTTTATTGAGGAGGGAAAACTTTCAAGGCAAGCTGAGCTGCAGAGAATTAAGAATCAATTTGGTGAAGCACAAGCTAAAGAACTTAAAGTAAAACAAGCTCAACTTGCAAAGGCAAAGGCAGAAGTAGTCATGAACCCGAACTTGATTGAAGTTGCTCCTGGGAGGCCTCCAAAGCAAAAGCAGAAGGAAGAGATTCCTGAAATTGAGCCATGGGATGCAAAAATTTTACCTTCTACAACATACGACGATTTCTCCATGGAGAAGGTTAATATGGAAAAAATCACTATATATGTAGAGCATCCAGAGCCACTGGAGCCACCAGCTGAGCCTGCACCACCACCGCCTCAGCCACTTAAGCTGACTAAGAAGGAGCAGAAGAAACTCAGAACACAAAGGCGCCTTGCTAAAGAGAAAGACAGGCAAGAAATGATCAGGCAAGGCCTCTTGGAGCCACCAAAGCCCAAAGTCAAGATGAGCAATCT ] [+] EMBL AK068062 [ ATGGGCATCAACCAAAACAAGCTCCTCCGCCCTAGAAGGCCTGGATTTCAGTTTATTGAGGAGGGAAAACTTTCAAGGCAAGCTGAGCTGCAGAGAATTAAGAATCAATTTGGTGAAGCACAAGCTAAAGAACTTAAAGTAAAACAAGCTCAACTTGCAAAGGCAAAGGCAGAAGTAGTCATGAACCCGAACTTGATTGAAGTTGCTCCTGGGAGGCCTCCAAAGCAAAAGCAGAAGGAAGAGATTCCTGAAATTGAGCCATGGGATGCAAAAATTTTACCTTCTACAACATACGACGATTTCTCCATGGAGAAGGTTAATATGGAAAAAATCACTATATATGTAGAGCATCCAGAGCCACTGGAGCCACCAGCTGAGCCTGCACCACCACCGCCTCAGCCACTTAAGCTGACTAAGAAGGAGCAGAAGAAACTCAGAACACAAAGGCGCCTTGCTAAAGAGAAAGACAGGCAAGAAATGATCAGGCAAGGCCTCTTGGAGCCACCAAAGCCCAAGGTCAAGATGAGCAATCTTATGAAAGTACTAGGAGCTGAAGCTACACAGGATCCAACACGTATGGAGTTGGAAATACGGACTGCTGCTGCAGAGCGTGAGCAGGCTCATGTAGATCGCAACATTGCTCGCAAGCTCACTCCATCAGAGCGCCGTGAAAAGAAAGAGAGGAAGCTTTTTGAAGATCCTAACACATTGGAGACTATAGTTTGTGTGTACAGAATCAGAGACCTGTCTCATCCGCAGACACGTTTTAAGGTGGATGTAAATGCACAAGAGAACCGTCTTACTGGTGCTGCAGTCATTGCGGATGGGATCAGTGTTGTTGTCGTTGAAGGAGGGAAGAAGTCAATCAAAAGGTACAATAAGCTGATGCTGAACCGTATTGACTGGGCTGCTGCGGTTGATGATGATGATGATGCTGATGAGGAATCAGACAAGCCTGTGAATAGCTGTGCATTGGTCTGGCAGGGGAGTGTGGCAAAACCCTGCTTTACCAGGTTCAGTGTACACAATTGCCGTAGTGAGGCTGCTGCCAAGAAGGTGTTTGCAGATGCTTCAGTTCCACACTACTGGGACCTGGCTGTCAATTTCTCAGAAGATTCATCTTGAGCTGAGCTTCTGTTCAGAACATGGAGGCGCCTGCTGTTGAAACCCCTGCCTAGGGATTACGATGTTCAATTCTCATGCAGTAAGTGATGAGTAGTAGCTAATTTCTCACCGTGGGTAAGTGTCCTCTTCAAGTTACGTACAAGCCTTATTACTTGCTCTGGAAGCATTTGTGGACTGAGTAATACTTCGTACTGTCATGAACATACCCTTGTAAGGGACTGCTGATCTTTTCGTTGCGGGATTTACTCATGTGAGCTAGAAACTGAATGCATGGAGGAACTGTTGAAATTTTTGCAGTATAAGCTTCCAACTATATCTGGACTGCTCAGGCCTTGAATATTGTTATGGGAATTGTGTTAATGAAAGTATGTAT] [-] EMBL CB628522 [ GCTCATGTAGATCGCAACATTGCTCGCAAGCTCACTCCATCAGAGCGCCGTGAAAAGAAAGAGAGGAAGCTTTTTGAAGATCCTAACACATTGGAGACTATAGTTTGTGTGTACAGAATGAGAGACCTGTCACATCCGCAGACACGTTTTAAGGTGGATGTAAATGCACAAGAGAACCGTCTTACTGGTGCTGCAGTCATTGCGGATGGGATCAGTGTTGTTGTCGTTGAAGGAGGGAAGAAGTCAATCAAAAGGTACAATAAGCTGATGCTGAACCGTATTGACTGGGCTGCTGCGGTTGATGATGATGATGATGCTGATGAGGAATCAGACAAGCCTGTGAATAGCTGTGCATTGGTCTGGCAGGGGAGTGTGGCAAAACCCTGCTTTACCAGGTTCAGTGTACACAATTGCCGTAGTGAGGCTGCTGCCAAGAAGGTGTTTGCAGATGCTTCAGTTCCACACTACTGGGACCTGGCTGTCAATTTCTCAGAAGATTCATCTTGAGCTGAGCTTCTGTTCAGAACATGGAGGTGCCTGCTGTTGAAACCCCTGCCTAGGGATTACGATGTTCAATTCTCATGCAGTAAGTTATGAGTAGTAGCTAATTTCTCACCGTGGGTAAGTGTCCTCTTCAAGTTACGTACAAGCCTTATTACTTGCTCTGGAAGCATTTGTGGACTGAGTAATACTTCGTACTGTCATGAACATACCCTTGTAAGGGACTGCTGATCTTTTCGTTGCGGGATTTACTCATGTGAGCTAGAAACTGAATGCATGGAGGAAGGGTTGAAATTTTTGCAGTAT ] [-] EMBL CB628523 [ CCGTGAAAAGAAAGAGAGGAAGCTTTTTGAAGATCCTAACACATTGGAGACTATAGTTTGTGTGTACAGAATGAGAGACCTGTCACATCCGCAGACACGTTTTAAGGTGGATGTAAATGCACAAGAGAACCGTCTTACTGGTGCTGCAGTCATTGCGGATGGGATCAGTGTTGTTGTCGTTGAAGGAGGGAAGAAGTCAATCAAAAGGTACAATAAGCTGATGCTGAACCGTATTGACTGGGCTGCTGCGGTTGATGATGATGATGATGCTGATGAGGAATCAGACAAGCCTGTGAATAGCTGTGCATTGGTCTGGCAGGGGAGTGTGGCAAAACCCTGCTTTACCAGGTTCAGTGTACACAATTGCCGTAGTGAGGCTGCTGCCAAGAAGGTGTTTGCAGATGCTTCAGTTCCACACTACTGGGACCTGGCTGTCAATTTCTCAGAAGATTCATCTTGAGCTGAGCTTCTGTTCAGAACATGGAGGTGCCTGCTGTTGAAACCCCTGCCTAGGGATTACGATGTTCAATTCTCATGCAGTAAGTTATGAGTAGTAGCTAATTTCTCACCGTGGGTAAGTGTCCTCTTCAAGTTACGTACAAGCCTTATTACTTGCTCTGGAAGCATTTGTGGACTGAGTAATACTTCGTACTGTCATGAACAGGCCCTTGTAAGGGACTGCTGATCTTTTCGTTGCGGGATTTACTCATGTGAGCTA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||