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Oryza sativa
cluster # 8350 cluster # 8350       Sequences # 5       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8350#0 length = 886 sequences # 1  
consensus_8350#1 length = 773 sequences # 1  
consensus_8350#2 length = 770 sequences # 1  
consensus_8350#3 length = 412 sequences # 1  
consensus_8350#4 length = 310 sequences # 1  

consensusID : consensus_8350#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 886
fasta sequence
                              [CCTCCGACGACTCCGATCCGTAGAGATGGACCGGTTCCGACCGCTCAGGCGGATCCAGGTGGACCCCGAGCCCGCCGCCGCCGCCCCGCCCCCGCCGGCGGCGGCCGCGGCGAACGGCGGCGCGGGGGAGGACGTGTCGGCGGCCCCCGCGGCGGGGCTCCTCATGGCGTCAAGGGTGCGGCGCCGCTCGGCGGTGTACCGCGACTGCAAGGGCGACTACATCGGCGTCCCCAACGACCCGTGCCTCACCAAGATCCTCTCCAAGCAAGGGGACAACAAAGTTCTGTTTGCAGATAAGGTATTGAAGTTCACTCAATCAGGAAAGATGAAAAGGCGCATCCTTGTGATCACAGATTTTGCTCTCTACCTTGTTGATCCTGATGCTGATATATTGAAGAGGAGGATAGCGCTCGCGGCTGTCGATAAGCTATGTATAAGCAAGCTCAGTGATAACTTCTTTGCAATCATCGTGCCAACTGAGTATGATTGTTTAATGGCCACCACTAGAAAGAAGGAAATAGTGGATATTATAATTAAGGCTATTAAGAGCAATTCTGAATATCAGCCTCAAGTGGCTTCTTCTAACAGGTCTGAATACCATGCTGCTGCTGAAGTGATTAAAGAAGTTGAGTTTGAGGAAGCTGAAGGAGGCGTTAAAACTAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTATGTATGATTGTTCCCTGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCGCTCTTTATGCAAAGTTCAAACAGACAATTCTTTGATGTATTGTGCCTTCTATTTTCTCTGATGTTTCTCTGGGAAAAAAAAGGTGACCTGTCGCTGACTATATACACTATCGCTAGATTTT]

[+] EMBL AK108938             [CCTCCGACGACTCCGATCCGTAGAGATGGACCGGTTCCGACCGCTCAGGCGGATCCAGGTGGACCCCGAGCCCGCCGCCGCCGCCCCGCCCCCGCCGGCGGCGGCCGCGGCGAACGGCGGCGCGGGGGAGGACGTGTCGGCGGCCCCCGCGGCGGGGCTCCTCATGGCGTCAAGGGTGCGGCGCCGCTCGGCGGTGTACCGCGACTGCAAGGGCGACTACATCGGCGTCCCCAACGACCCGTGCCTCACCAAGATCCTCTCCAAGCAAGGGGACAACAAAGTTCTGTTTGCAGATAAGGTATTGAAGTTCACTCAATCAGGAAAGATGAAAAGGCGCATCCTTGTGATCACAGATTTTGCTCTCTACCTTGTTGATCCTGATGCTGATATATTGAAGAGGAGGATAGCGCTCGCGGCTGTCGATAAGCTATGTATAAGCAAGCTCAGTGATAACTTCTTTGCAATCATCGTGCCAACTGAGTATGATTGTTTAATGGCCACCACTAGAAAGAAGGAAATAGTGGATATTATAATTAAGGCTATTAAGAGCAATTCTGAATATCAGCCTCAAGTGGCTTCTTCTAACAGGTCTGAATACCATGCTGCTGCTGAAGTGATTAAAGAAGTTGAGTTTGAGGAAGCTGAAGGAGGCGTTAAAACTAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTATGTATGATTGTTCCCTGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCGCTCTTTATGCAAAGTTCAAACAGACAATTCTTTGATGTATTGTGCCTTCTATTTTCTCTGATGTTTCTCTGGGAAAAAAAAGGTGACCTGTCGCTGACTATATACACTATCGCTAGATTTT]


>consensus_8350#0 CCTCCGACGACTCCGATCCGTAGAGATGGACCGGTTCCGACCGCTCAGGCGGATCCAGGT GGACCCCGAGCCCGCCGCCGCCGCCCCGCCCCCGCCGGCGGCGGCCGCGGCGAACGGCGG CGCGGGGGAGGACGTGTCGGCGGCCCCCGCGGCGGGGCTCCTCATGGCGTCAAGGGTGCG GCGCCGCTCGGCGGTGTACCGCGACTGCAAGGGCGACTACATCGGCGTCCCCAACGACCC GTGCCTCACCAAGATCCTCTCCAAGCAAGGGGACAACAAAGTTCTGTTTGCAGATAAGGT ATTGAAGTTCACTCAATCAGGAAAGATGAAAAGGCGCATCCTTGTGATCACAGATTTTGC TCTCTACCTTGTTGATCCTGATGCTGATATATTGAAGAGGAGGATAGCGCTCGCGGCTGT CGATAAGCTATGTATAAGCAAGCTCAGTGATAACTTCTTTGCAATCATCGTGCCAACTGA GTATGATTGTTTAATGGCCACCACTAGAAAGAAGGAAATAGTGGATATTATAATTAAGGC TATTAAGAGCAATTCTGAATATCAGCCTCAAGTGGCTTCTTCTAACAGGTCTGAATACCA TGCTGCTGCTGAAGTGATTAAAGAAGTTGAGTTTGAGGAAGCTGAAGGAGGCGTTAAAAC TAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTATGTATGATTGTTCCC TGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCGCTCTTTATGCAAAGT TCAAACAGACAATTCTTTGATGTATTGTGCCTTCTATTTTCTCTGATGTTTCTCTGGGAA AAAAAAGGTGACCTGTCGCTGACTATATACACTATCGCTAGATTTT



consensusID : consensus_8350#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 773
fasta sequence
                              [TACAGATGGACCGGTTCCGACCGCTCAGGCGGATCCAGGTGGACCCCGAGCCCGCCGCCGCCGCCCCGCCCCCGCCGGCGGCGGCCGCGGCGAACGGCGGCGCGGGGGAGGACGTGTCGGCGGCCCCCGCGGCGGGGCTCCTCATGGCGTCAAGGGTGCGGCGCCGCTCGGCGGTGTACCGCGACTGCAAGGGCGACTACATCGGCGTCCCCAACGACCCGTGCCTCACCAAGATCCTCTCCAAGCAAGGTGCCCCCCGCCCCTCCCGTTTCTTTGGTCGGAAATTCGTGTGCTGTGGCCTGCGGGGTGCGATCTTGGGTTGGTAGGTTCGGATCGTGCATGTTGCGGTGGTTCAGTTGCTTGGATCTGATCCGTGGCGGAGGTGTGATTTTCTTTTACCCCTCCGATGTGGCAGTGCTAGTTTGGATAATAAATTTGTCGTGAATTGTCAATCAGCTATTAGGTGTTGATTCGATCGATAGCTCCATATACAAGTTAAGCCCCCGTAGCAAAGTGATTTTGATTGTGCGATTTGATGTGCTGAACCATGCAGAGATTAGAGCTGCTGTGCAGTTTCTCTCTGATTTTTACTCTCTTGAGTGACATATAGAATTGGCTAATACTGCTCAATAGTTGGTTGACAACCTGATTTGATGCAACCTAGCTGCTAAAGGCGTTTTAAATCATTCGTTTGCGTGAATGCTGTACTAGTTTCTAATCATTGATGTTTAAGAGCCTATTGTAGCGTGAAGAATCATCTCCAAGCAGAGGAA]

[+] EMBL CB659601             [TACAGATGGACCGGTTCCGACCGCTCAGGCGGATCCAGGTGGACCCCGAGCCCGCCGCCGCCGCCCCGCCCCCGCCGGCGGCGGCCGCGGCGAACGGCGGCGCGGGGGAGGACGTGTCGGCGGCCCCCGCGGCGGGGCTCCTCATGGCGTCAAGGGTGCGGCGCCGCTCGGCGGTGTACCGCGACTGCAAGGGCGACTACATCGGCGTCCCCAACGACCCGTGCCTCACCAAGATCCTCTCCAAGCAAGGTGCCCCCCGCCCCTCCCGTTTCTTTGGTCGGAAATTCGTGTGCTGTGGCCTGCGGGGTGCGATCTTGGGTTGGTAGGTTCGGATCGTGCATGTTGCGGTGGTTCAGTTGCTTGGATCTGATCCGTGGCGGAGGTGTGATTTTCTTTTACCCCTCCGATGTGGCAGTGCTAGTTTGGATAATAAATTTGTCGTGAATTGTCAATCAGCTATTAGGTGTTGATTCGATCGATAGCTCCATATACAAGTTAAGCCCCCGTAGCAAAGTGATTTTGATTGTGCGATTTGATGTGCTGAACCATGCAGAGATTAGAGCTGCTGTGCAGTTTCTCTCTGATTTTTACTCTCTTGAGTGACATATAGAATTGGCTAATACTGCTCAATAGTTGGTTGACAACCTGATTTGATGCAACCTAGCTGCTAAAGGCGTTTTAAATCATTCGTTTGCGTGAATGCTGTACTAGTTTCTAATCATTGATGTTTAAGAGCCTATTGTAGCGTGAAGAATCATCTCCAAGCAGAGGAA]


>consensus_8350#1 TACAGATGGACCGGTTCCGACCGCTCAGGCGGATCCAGGTGGACCCCGAGCCCGCCGCCG CCGCCCCGCCCCCGCCGGCGGCGGCCGCGGCGAACGGCGGCGCGGGGGAGGACGTGTCGG CGGCCCCCGCGGCGGGGCTCCTCATGGCGTCAAGGGTGCGGCGCCGCTCGGCGGTGTACC GCGACTGCAAGGGCGACTACATCGGCGTCCCCAACGACCCGTGCCTCACCAAGATCCTCT CCAAGCAAGGTGCCCCCCGCCCCTCCCGTTTCTTTGGTCGGAAATTCGTGTGCTGTGGCC TGCGGGGTGCGATCTTGGGTTGGTAGGTTCGGATCGTGCATGTTGCGGTGGTTCAGTTGC TTGGATCTGATCCGTGGCGGAGGTGTGATTTTCTTTTACCCCTCCGATGTGGCAGTGCTA GTTTGGATAATAAATTTGTCGTGAATTGTCAATCAGCTATTAGGTGTTGATTCGATCGAT AGCTCCATATACAAGTTAAGCCCCCGTAGCAAAGTGATTTTGATTGTGCGATTTGATGTG CTGAACCATGCAGAGATTAGAGCTGCTGTGCAGTTTCTCTCTGATTTTTACTCTCTTGAG TGACATATAGAATTGGCTAATACTGCTCAATAGTTGGTTGACAACCTGATTTGATGCAAC CTAGCTGCTAAAGGCGTTTTAAATCATTCGTTTGCGTGAATGCTGTACTAGTTTCTAATC ATTGATGTTTAAGAGCCTATTGTAGCGTGAAGAATCATCTCCAAGCAGAGGAA



consensusID : consensus_8350#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 770
fasta sequence
                              [TGTTGTACTATGCACAGCATATGATATTCTCACTGTACCATGTTCTTTTTGTATTTAGCATCACCAGATTTCTAAAGCAGGTCATGACCTTTGATACATTGCAGGGGACAACAAAGTTCTGTTTGCAGATAAGGTATTGAAGTTCACTCAATCAGGAAAGATGAAAAGGCGCATCCTTGTGATCACAGATTTTGCTCTCTACCTTGTTGATCCTGATGCTGATATATTGAAGAGGAGGATAGCGCTCGCGGCTGTCGATAAGCTATGTATAAGCAAGCTCAGTGATAACTTCTTTGCAATCATCGTGCCAACTGAGTATGATTGTTTAATGGCCAGCACTAGAAAGAAGGAAATAGTGGATATTATAATTAAGGCTATTAAGAGCAATTCTGAATATCAGCCTCAAGTGGCTTCTTCTAACAGGTTTGAATACCATGCTGCTGCTGAAGTGATTAAAGAAGTTGAGTTTGAGGAAGCTGAAGGAGGCGTTAAAACTAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTATGTATGATTGTTCCCTGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCGCTCTTTATGCAAAGTTCAAACAGACAATTCTTTGATGTATTGTGCCTTCTATTTTCTCTGATGTTTCTCTGGGAAAAAAAAGGTGACCTGTCGCTGACTATATACACTATCGCTAGATTTTTCTTTTTATCATAGGGTATTGCCACATGCTTTTGTGCTATTGGAATTTC]

[-] EMBL CB659602             [TGTTGTACTATGCACAGCATATGATATTCTCACTGTACCATGTTCTTTTTGTATTTAGCATCACCAGATTTCTAAAGCAGGTCATGACCTTTGATACATTGCAGGGGACAACAAAGTTCTGTTTGCAGATAAGGTATTGAAGTTCACTCAATCAGGAAAGATGAAAAGGCGCATCCTTGTGATCACAGATTTTGCTCTCTACCTTGTTGATCCTGATGCTGATATATTGAAGAGGAGGATAGCGCTCGCGGCTGTCGATAAGCTATGTATAAGCAAGCTCAGTGATAACTTCTTTGCAATCATCGTGCCAACTGAGTATGATTGTTTAATGGCCAGCACTAGAAAGAAGGAAATAGTGGATATTATAATTAAGGCTATTAAGAGCAATTCTGAATATCAGCCTCAAGTGGCTTCTTCTAACAGGTTTGAATACCATGCTGCTGCTGAAGTGATTAAAGAAGTTGAGTTTGAGGAAGCTGAAGGAGGCGTTAAAACTAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTATGTATGATTGTTCCCTGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCGCTCTTTATGCAAAGTTCAAACAGACAATTCTTTGATGTATTGTGCCTTCTATTTTCTCTGATGTTTCTCTGGGAAAAAAAAGGTGACCTGTCGCTGACTATATACACTATCGCTAGATTTTTCTTTTTATCATAGGGTATTGCCACATGCTTTTGTGCTATTGGAATTTC]


>consensus_8350#2 TGTTGTACTATGCACAGCATATGATATTCTCACTGTACCATGTTCTTTTTGTATTTAGCA TCACCAGATTTCTAAAGCAGGTCATGACCTTTGATACATTGCAGGGGACAACAAAGTTCT GTTTGCAGATAAGGTATTGAAGTTCACTCAATCAGGAAAGATGAAAAGGCGCATCCTTGT GATCACAGATTTTGCTCTCTACCTTGTTGATCCTGATGCTGATATATTGAAGAGGAGGAT AGCGCTCGCGGCTGTCGATAAGCTATGTATAAGCAAGCTCAGTGATAACTTCTTTGCAAT CATCGTGCCAACTGAGTATGATTGTTTAATGGCCAGCACTAGAAAGAAGGAAATAGTGGA TATTATAATTAAGGCTATTAAGAGCAATTCTGAATATCAGCCTCAAGTGGCTTCTTCTAA CAGGTTTGAATACCATGCTGCTGCTGAAGTGATTAAAGAAGTTGAGTTTGAGGAAGCTGA AGGAGGCGTTAAAACTAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTA TGTATGATTGTTCCCTGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCG CTCTTTATGCAAAGTTCAAACAGACAATTCTTTGATGTATTGTGCCTTCTATTTTCTCTG ATGTTTCTCTGGGAAAAAAAAGGTGACCTGTCGCTGACTATATACACTATCGCTAGATTT TTCTTTTTATCATAGGGTATTGCCACATGCTTTTGTGCTATTGGAATTTC



consensusID : consensus_8350#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 412
fasta sequence
                              [TAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTATGTATGATTGTTCCCTGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCGCTCTTTATGCAAAGTTCAAACAGACAATTCTTTGATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTCTTCCCTTTCCTTACCAAAGGGCAAATTCTTTAAACCCGGCAGAACTAGCCCTTTTAGGGGGGGTAAATTTTAACCTGGGCGAAACAAGGGCCAAACCTGTTCCCGGGGGAAAATGGTTATCCGTTAAAAATTCCACAAAAAATACAACCCGGAACCTAAAAGGGAAAACCCGGGGGGGCCTAAGG]

[+] EMBL CF318742             [TAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTATGTATGATTGTTCCCTGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCGCTCTTTATGCAAAGTTCAAACAGACAATTCTTTGATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTCTTCCCTTTCCTTACCAAAGGGCAAATTCTTTAAACCCGGCAGAACTAGCCCTTTTAGGGGGGGTAAATTTTAACCTGGGCGAAACAAGGGCCAAACCTGTTCCCGGGGGAAAATGGTTATCCGTTAAAAATTCCACAAAAAATACAACCCGGAACCTAAAAGGGAAAACCCGGGGGGGCCTAAGG]


>consensus_8350#3 TAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTATGTATGATTGTTCCC TGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCGCTCTTTATGCAAAGT TCAAACAGACAATTCTTTGATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTCTTCCCTTTCCTTA CCAAAGGGCAAATTCTTTAAACCCGGCAGAACTAGCCCTTTTAGGGGGGGTAAATTTTAA CCTGGGCGAAACAAGGGCCAAACCTGTTCCCGGGGGAAAATGGTTATCCGTTAAAAATTC CACAAAAAATACAACCCGGAACCTAAAAGGGAAAACCCGGGGGGGCCTAAGG



consensusID : consensus_8350#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 310
fasta sequence
                              [AGGAGTCGTTAAAACTAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTATGTATGATTGTTCCCTGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCGCTCTTTATGCAAAGTTCAAACAGACAATTCTTTGATGTATTGTGCCTTCTATTTTCTCTGATGTTTCTCTGGGAAAAAAAAGGTGACCTGTCGCTGACTATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF321725             [AGGAGTCGTTAAAACTAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTATGTATGATTGTTCCCTGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCGCTCTTTATGCAAAGTTCAAACAGACAATTCTTTGATGTATTGTGCCTTCTATTTTCTCTGATGTTTCTCTGGGAAAAAAAAGGTGACCTGTCGCTGACTATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_8350#4 AGGAGTCGTTAAAACTAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTA TGTATGATTGTTCCCTGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCG CTCTTTATGCAAAGTTCAAACAGACAATTCTTTGATGTATTGTGCCTTCTATTTTCTCTG ATGTTTCTCTGGGAAAAAAAAGGTGACCTGTCGCTGACTATATAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8350#3      ------------------------------------------------------------
consensus_8350#4      ------------------------------------------------------------
consensus_8350#2      ------------------------------------------------------------
consensus_8350#0      CCTCCGACGACTCCGATCCGTAGAGATGGACCGGTTCCGACCGCTCAGGCGGATCCAGGT 60
consensus_8350#1      ------------------------------------------------------------
                                                                                  

consensus_8350#3      ------------------------------------------------------------
consensus_8350#4      ------------------------------------------------------------
consensus_8350#2      ------------------------------------------------------------
consensus_8350#0      GGACCCCGAGCCCGCCGCCGCCGCCCCGCCCCCGCCGGCGGCGGCCGCGGCGAACGGCGG 120
consensus_8350#1      ------------------------------------------------------------
                                                                                  

consensus_8350#3      ------------------------------------------------------------
consensus_8350#4      ------------------------------------------------------------
consensus_8350#2      -----------------------------------------------TGTTGTACTATGC 13
consensus_8350#0      CGCGGGGGAGGACGTGTCGGCGGCCCCCGCGGCGGGGCTCCTCATGGCGTCAAGGGTGCG 180
consensus_8350#1      ------------------------------------------------------------
                                                                                  

consensus_8350#3      ------------------------------------------------------------
consensus_8350#4      ------------------------------------------------------------
consensus_8350#2      ACAGCATATGATATTCTCACTGTACCATGTTCTTTTTGTATTTAGCATCACCAGATTTCT 73
consensus_8350#0      GCGCCGCTCGGCGGTGTACCGCGACTGCAAGGGCGACTACATCGGCGTCCCCAACGACCC 240
consensus_8350#1      ------------------------------------------------------------
                                                                                  

consensus_8350#3      ------------------------------------------------------------
consensus_8350#4      ------------------------------------------------------------
consensus_8350#2      AAAGCAGGTCATGACCTTTGATACATTGCAGGGGACAACAAAGTTCTGTTTGCAGATAAG 133
consensus_8350#0      GTGCCTCACCAAGATCCTC--TCCAAGCAAGGGGACAACAAAGTTCTGTTTGCAGATAAG 298
consensus_8350#1      -------------------------------------------------------TACAG 5
                                                                                  

consensus_8350#3      ------------------------------------------------------------
consensus_8350#4      ------------------------------------------------------------
consensus_8350#2      GTATTGAAGTTCACTCAATCAGGAAAGATGAAAAGGCGCATCCTTGTGATCACAGATTTT 193
consensus_8350#0      GTATTGAAGTTCACTCAATCAGGAAAGATGAAAAGGCGCATCCTTGTGATCACAGATTTT 358
consensus_8350#1      ATGGACCGGTTCCGACCGCTCAGGCGGATCCAGGTGGACCCCGAGCCCGCCGCCGCCGCC 65
                                                                                  

consensus_8350#3      ------------------------------------------------------------
consensus_8350#4      ------------------------------------------------------------
consensus_8350#2      GCTCTCTACCTTGTTGATCCTGATGCTGATATATTGAAGAGGAGGATAGCGCTCGCGGCT 253
consensus_8350#0      GCTCTCTACCTTGTTGATCCTGATGCTGATATATTGAAGAGGAGGATAGCGCTCGCGGCT 418
consensus_8350#1      CCGCCCCCGCCGGCGGCGGCCGCGGCGAACGGCGGCGCGGGGGAGGACGTGTCGGCGGCC 125
                                                                                  

consensus_8350#3      ------------------------------------------------------------
consensus_8350#4      ------------------------------------------------------------
consensus_8350#2      GTCGATAAGCTATGTATAAGCAAGCTCAGTGATAACTTCTTTGCAATCATCGTGCCAACT 313
consensus_8350#0      GTCGATAAGCTATGTATAAGCAAGCTCAGTGATAACTTCTTTGCAATCATCGTGCCAACT 478
consensus_8350#1      CCCGCGGCGGGGCTCCTCATGGCGTCAAGGGTGCGGCGCCGCTCGGCGGTGTACCGCGAC 185
                                                                                  

consensus_8350#3      ------------------------------------------------------------
consensus_8350#4      ------------------------------------------------------------
consensus_8350#2      GAGTATGATTGTTTAATGGCCAGCACTAGAAAGAAGGAAATAGTGGATATTATAATTAAG 373
consensus_8350#0      GAGTATGATTGTTTAATGGCCACCACTAGAAAGAAGGAAATAGTGGATATTATAATTAAG 538
consensus_8350#1      TGCAAGGGCGACTACATCGGCGTCCCCAACGACCCGTGCCTCACCAAGATCCTCTCCAAG 245
                                                                                  

consensus_8350#3      ------------------------------------------------------------
consensus_8350#4      ------------------------------------------------------------
consensus_8350#2      GCTATTAAGAGCAATTCTGAATATCAGCCTCAAGTGGCTTCTTCTAACAGGTTTGAATAC 433
consensus_8350#0      GCTATTAAGAGCAATTCTGAATATCAGCCTCAAGTGGCTTCTTCTAACAGGTCTGAATAC 598
consensus_8350#1      C------AAGGTGCCCCCCGCCCCTCCCGTTTCTTTGGTCGGAAATTCGTGTGCTGTGGC 299
                                                                                  

consensus_8350#3      ------------------------------------------------------------
consensus_8350#4      -----------------------------------------------AGGAGTCGTTAAA 13
consensus_8350#2      CATGCTGCTGCTGAAGTGATTAAAGAAGTTGAGTTTGAGGAAGCTGAAGGAGGCGTTAAA 493
consensus_8350#0      CATGCTGCTGCTGAAGTGATTAAAGAAGTTGAGTTTGAGGAAGCTGAAGGAGGCGTTAAA 658
consensus_8350#1      CTGCGGGGTGCGATCTTGGGTTGGTAGGTTCGGATCGTGCATGTTGC-GGTGGTTCAGTT 358
                                                                                  

consensus_8350#3      --TAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTATGTATGATTGTTC 58
consensus_8350#4      ACTAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTATGTATGATTGTTC 73
consensus_8350#2      ACTAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTATGTATGATTGTTC 553
consensus_8350#0      ACTAGGATCACGCACAAGGCGAAGGCGAAGTCATGATTGAGAAATTATGTATGATTGTTC 718
consensus_8350#1      GCTTGGATCTGATCCGTGGCGGAGGTGTGATTTTCTTTTACCCCTCCGATGTGGCAGTGC 418
                        * *****     *  **** *** *   *  *  ** *    *    * **   ** *

consensus_8350#3      C---CTGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCGCTCTTTATGC 115
consensus_8350#4      C---CTGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCGCTCTTTATGC 130
consensus_8350#2      C---CTGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCGCTCTTTATGC 610
consensus_8350#0      C---CTGTAAAATGTATAGTTCTTCGAGTTTCAAGGGATTCTTATCAGCGCTCTTTATGC 775
consensus_8350#1      TAGTTTGGATAATAAATTTGTCGTGAATTGTCAATCAGCTATTAGGTGTTGATTCGATCG 478
                           ** * ***  **   ** *  * * ****     * ***   *     *  **  

consensus_8350#3      AAAGTTCAA---ACAGAC-AATTCTTTGATGCAAAAAAAA-------------------- 151
consensus_8350#4      AAAGTTCAA---ACAGAC-AATTCTTTGATGTATTGTGCCTTCTATTTTCTCTGATGTTT 186
consensus_8350#2      AAAGTTCAA---ACAGAC-AATTCTTTGATGTATTGTGCCTTCTATTTTCTCTGATGTTT 666
consensus_8350#0      AAAGTTCAA---ACAGAC-AATTCTTTGATGTATTGTGCCTTCTATTTTCTCTGATGTTT 831
consensus_8350#1      ATAGCTCCATATACAAGTTAAGCCCCCGTAGCAAAGTGATTTTGATTGTGCGATTTGATG 538
                      * ** ** *   ***    **  *   *  * *                           

consensus_8350#3      ----AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 207
consensus_8350#4      CTCTGGGAAAAAAAAGGTGACCTGTCGCTGACTATATAAAAAAAAAAAAAAAAAAAAAAA 246
consensus_8350#2      CTCTGGGAAAAAAAAGGTGACCTGTCGCTGACTATATACACTATCGCTAGATTTTTCTTT 726
consensus_8350#0      CTCTGGGAAAAAAAAGGTGACCTGTCGCTGACTATATACACTATCGCTAGATTTT----- 886
consensus_8350#1      TGCTGAACCATGCAGAGATTAGAGCTGCTGTGCAGTTTCTCTCTGATTTT-TACTCTCTT 597
                               *   *                   *                          

consensus_8350#3      AAAAAAAAAAAACCCTTGTCTTCCCTTTCCTTACCAAAGGGCAAATTCTTTAAACCCGGC 267
consensus_8350#4      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 306
consensus_8350#2      TTATCATAGGG--TATTGCCACATGCTTTTGTGCTATTGG--AATTTC------------ 770
consensus_8350#0      ------------------------------------------------------------
consensus_8350#1      GAGTGACATATAGAATTGGCTAATACTGCTCAATAGTTGGTTGACAACCTGATTTGATGC 657
                                                                                  

consensus_8350#3      AGAACTAGCCCTTTTAGGGGGGGTAAATTTTAACCTGGGCGAAACAAGGGCCAAACCTGT 327
consensus_8350#4      AAAA-------------------------------------------------------- 310
consensus_8350#2      ------------------------------------------------------------
consensus_8350#0      ------------------------------------------------------------
consensus_8350#1      A-ACCTAGCTGCTAAAGGCGTTTTAAATCAT----TCGTTTGCGTGAATGCTGTACTAGT 712
                                                                                  

consensus_8350#3      TCCCGGGGGAAAATGGTTATCCGTTAAAAATTCCACAAAAAATACAACCCGGAACCTAAA 387
consensus_8350#4      ------------------------------------------------------------
consensus_8350#2      ------------------------------------------------------------
consensus_8350#0      ------------------------------------------------------------
consensus_8350#1      TTCTAATCATTGATGTTTAAGAGCCTATTGTAGCGTGAAGAATCATCTCCAAGCAGAGGA 772
                                                                                  

consensus_8350#3      AGGGAAAACCCGGGGGGGCCTAAGG 412
consensus_8350#4      -------------------------
consensus_8350#2      -------------------------
consensus_8350#0      -------------------------
consensus_8350#1      A------------------------ 773
                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)