These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8369#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 395 fasta sequence [CGCCTTCACTCACCAGTTTTGCCAGCGCCTCGCGCAG-TGAATTACGTGATACGCCGAGTTGCATCGCCAGTTGGCGCTCAGCGGGCAACTTCATGCCCGCTTCCAGGTTTTTTTCATCAATCAGCGCCCGCACACGATCGGCAACCTCGTCTGACAGGCGTCTGGGTAAAACAATCATTAAGGAATCATCCACGTTAAGACATAAGCCTG-AAGCGTGGTGATCACGCCCACTATACAGGTGAAGATCAGGCTGTGTTTGACAGTAAAGCGGAACAAATCAGACTCTTTGCCCACCAGGCCTACCGCCGCACAGGCG-ATAGCGA-TAGATTG-CGGGGAGATCATCTTACCGGTGACGCCACCGGT-GGTATTGGCGGCAACCAGCAACAGATCAGAGA] [+] EMBL AU069954 [CGCCTTCACTCACCAGTTTTGCCAGCGCCTCGC CAGATGAATTACGTGATACGCCGAGTTGCATCGCCAGTTGGCGCTCAGCGGGCAACTTCATGCCCGCTTCCAGGTTTTTTTCATCAATCAGCGCCCGCACACGATCGGCAACCTCGTCTGACAGGCGTCTGGGTAAAACAATCATTAAGGAATCATCCACGTTAAGACATAAGCCTGTAAGCGTGGTGATCACGCCCACTATACAGGTGAAGATCAGGCTGTGTTTGACAGTAAAGCGGAACAAATCAGACTCTTTGCCCACCAGGCCTACCGCCGCACAGGCGAATAGCGA TAGATTGTCGGGGAGATCATCTTACCGGTGACGCCANCGGT GGTATTGGCGGCAACCAGCA ] [+] EMBL AU069881 [CGCCTTCACTCACCAGTTTTGCCAGCGCCTCGCGCAG TGAATTACGTGATACGCCGAGTTGCATCGCCAGTTGGCGCTCAGCGGGCAACTTCATGCCCGCTTCCAGGTTTTTTTCATCAATCAGCGCCCGCACACGATCGGCAACCTCGTCTGACAGGCGTCTGGGTAAAACAATCATTAAGGAATCATCCACGTTAAGACATAAGCCTG AAGCGTGGTGATCACGCCCACTATACAGGTGAAGATCAGGCTGTGTTTGACAGTAAAGCGGAACAAATCAGACTCTTTGCCCACCAGGCCTACCGNCGCACAGGCG ATAGCGA TAGATTG CGGGGAGATCATCTTACCGGTGACGCCACCGGT GGTATTGGCG ] [+] EMBL AU069743 [CGCCTTCACTCACCAGTTTTGCCAGCGCCTCGCGCAG TGAATTACGTGATACGCCGAGTTGCATCGCCAGTTGGCGCTCAGCGGGCAACTTCATGCCCGCTTCCAGGTTTTTTTCATCAATCAGCGCCCGCACACGATCGGCAACCTCGTCTGACAGGCGTCTGGGTAAAACAATCATTAAGGAATCATCCACGTTAAGACATAAGCCTG AAGCGTGGTGATCACGCCCACTATACAGGTGAAGATCAGGCTGTGTTTGACAGTAAAGCGGAACAAATCAGACTCTTTGCCCACCAGGCCTACCGCCGCACAGGCG ATAGCGA TAGATTG CGGGGAGATNATCTTACCGGTGACGCCACCGGT GGTATTGGCG ] [+] EMBL OSS4553A [CGCCTTCACTCACCAGTTTTGCCAGCGCCTTTGGANG TGAATTACGTGATACGCCGAGTTGCATCGCCAGTTGGCGCTCAGCGGGCAACTTCATGCCCGCTTCCAGGTTTTTTTCATCAATCAGCGCCCGCACACGATCGGCAACCTCGTCTGACAGGCGTCTGGGTAAAACAATCATTAAGGAATCATCCACGTTAAGACATAAGCCTG AAGCGTGGTGATCACGNCCACTATACAGGTGAAGATCAGGCTGTGTTTGACAGTAAAGCGGAACAAATCAGACTCTTTGCNCACCAGGCCTACCGCCGCACAGGGG ATTANGATTAGATTG CGGGGAGATCATCTTACCGGTGACGCCACCGGTGGGTATTG ] [+] EMBL AU070582 [cnCCTTCACTCACCAGTTTTGCCAGCGCCTCGCGCAG TGAATTACGTGATACGCCGAGTTGCATCGCCAGTTGGCGCTCAGCGGGCAACTTCATGCCCGCTTCCAGGTTTTTTTCATCAATCAGCGCCCGCACACGATCGGCAACCTCGTCTGACAGGCGTCTGGGTAAAACAATCATTAAGGAATCATCCACGTTAAGACATAAGCCTG AAGCGTGGTGATCACGCCCACTATACAGGTGAAGATCAGGCTGTGTTTGACAGTAAAGCGGAACAAATCAGACTCTTTGCCCACCAGGCCTACCGCCGCACAGGCG ATAGCGA TAGATTG CGGGGAGATCATCTTACCGGTGACGCCACCGGT GGTATTGGCGGCAACCAGCAACAGATCAGAGA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||