cluster # 8381

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Oryza sativa
cluster # 8381 cluster # 8381 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8381#0 length = 1515 sequences # 5
consensusID : consensus_8381#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1515
fasta sequence
                              [AAACCGTAGTTGCTTTCCTTGCATGCATGGAGGTCATTAGCTCAGGATTTCAGGCTGCTTTCATGGTTCCAACGGAGGTTCTTGCCCTCCAGCATTATGAACATCTAACTTCATTGCTGGAGAAGTTTGATGGAGATGAATGCAAACCAAACATTGCTTTACTAACTGGTTCAACTTCCACGAGGGAATCAAGGATTATTCGAAATGGTCTCAAGACAGGAGAAATAGCAATGGTCATTGGAACACACAGCTTAATTGGTGATAAAACCGAATTCTCAGCTTTGCGCATCTCTGTTATAGATGAGCAGCAGCGCTTTGGTGTTGTTCAAAGAGGAAGGTTTAATAGTAAGCTATATACCCCTTCCACGAAATCGAGT-GATGATGATACAATCTCAGACGAGAATTCCGCTTCTGAAATATTTATGGCTCCCCATGTTCTTGCTATGTCCGCTACTCCAATCCCAAGAACGTTGGCTCTTGCTCTGTATGGGGACATGTCCCTTACACAGATCACGGACTTGCCTCCAGGAAGACAACCTATAGAAACTCTTGCTCTTGAAGGAAATGATGCTGGTTTTGAATCTGTCTTCCAGATGATGAGTGATGAACTGGTTGATGGAGGCAAGGTCTACCTCGTATATCCTATCATAGAAGAATCAGAGCAGCTACCACAACTTCATGCAGCAAAAGCCGAGTTTGATTCCATAAAGCAAAAATTTGAAGGTTATCCCTGTGGGCTGTTGCACGGTCGCATGAGGAGCGATGAGAAGGATGGAGCCCTCAGCAGTTTTAGATCCGGGGAAACACGTATTCTCCTCTCAACACAAGTGATTGAGATTGGAGTCGATGTTCCTGATGCTTCCATGATGGTTGTCATGAATGCTGAGAGATTTGGAATGTCTCAGCTGCACCAGTTAAGGGGTCGGGTAGGGCGTGGCGAAAGGAAATCCAGATGTGTGTTCCTATGCTCCACTCCTAGCGCGCTGCCAAGGTTGAAGGTGCTTGAGAAGTCATCCGATGGATTCTACTTGGCTAACGCCGACCTGCTACTGCGTGGCCCTGGTGATCTACTCGGCAAGAAACAGTCAGGGCATCTTCCAGAGTTTCCAATAGCTAGACTGGAGATTGATGGCAGTATTCTACAAGAAGCTCATCTTGCTGCACTTAACGTTTTGGGAACAAGCAACGACCTTGCACA-ATTTCCAGGACTAAAAG-TTGAGCTCAGCATGAGA---CAACCGCTGTGCATTCTTGGAGATTGACCTGTGATCTTTACTGAGCAGACAGTGCAGTGAGAGTGTGACACTGAACAGCGTTGTAGTGCTCATTGGGCAAAGCTTTTGCATTCTGGCTTGTGCGGTGCAGGTGAACAATCCTTTTTCAGATGCTGGCAAGATTGCAAGTTACTACTAGTAGTATTTTATCAAACACTTTTTTTAGCAATACCTGACCAGTGATAGATGAAAAAAAAATCAGTAACATAATTTCATTATCATCCCAAAATGCTTTCGCCAAAAA]

[+] EMBL AK058346             [AAACCGTAGTTGCTTTCCTTGCATGCATGGAGGTCATTAGCTCAGGATTTCAGGCTGCTTTCATGGTTCCAACGGAGGTTCTTGCCCTCCAGCATTATGAACATCTAACTTCATTGCTGGAGAAGTTTGATGGAGATGAATGCAAACCAAACATTGCTTTACTAACTGGTTCAACTTCCACGAGGGAATCAAGGATTATTCGAAATGGTCTCAAGACAGGAGAAATAGCAATGGTCATTGGAACACACAGCTTAATTGGTGATAAAACCGAATTCTCAGCTTTGCGCATCTCTGTTATAGATGAGCAGCAGCGCTTTGGTGTTGTTCAAAGAGGAAGGTTTAATAGTAAGCTATATACCCCTTCCACGAAATCGAGT GATGATGATACAATCTCAGACGAGAATTCCGCTTCTGAAATATTTATGGCTCCCCATGTTCTTGCTATGTCCGCTACTCCAATCCCAAGAACGTTGGCTCTTGCTCTGTATGGGGACATGTCCCTTACACAGATCACGGACTTGCCTCCAGGAAGACAACCTATAGAAACTCTTGCTCTTGAAGGAAATGATGCTGGTTTTGAATCTGTCTTCCAGATGATGAGTGATGAACTGGTTGATGGAGGCAAGGTCTACCTCGTATATCCTATCATAGAAGAATCAGAGCAGCTACCACAACTTCATGCAGCAAAAGCCGAGTTTGATTCCATAAAGCAAAAATTTGAAGGTTATCCCTGTGGGCTGTTGCACGGTCGCATGAGGAGCGATGAGAAGGATGGAGCCCTCAGCAGTTTTAGATCCGGGGAAACACGTATTCTCCTCTCAACACAAGTGATTGAGATTGGAGTCGATGTTCCTGATGCTTCCATGATGGTTGTCATGAATGCTGAGAGATTTGGAATGTCTCAGCTGCACCAGTTAAGGGGTCGGGTAGGGCGTGGCGAAAGGAAATCCAGATGTGTGTTCCTATGCTCCACTCCTAGCGCGCTGCCAAGGTTGAAGGTGCTTGAGAAGTCATCCGATGGATTCTACTTGGCTAACGCCGACCTGCTACTGCGTGGCCCTGGTGATCTACTCGGCAAGAAACAGTCAGGGCATCTTCCAGAGTTTCCAATAGCTAGACTGGAGATTGATGGCAGTATTCTACAAGAAGCTCATCTTGCTGCACTTAACGTTTTGGGAACAAGCAACGACCTTGCACA ATTTCCAGGACTAAAAG TTGAGCTCAGCATGAGA   CAACCGCTGTGCATTCTTGGAGATTGACCTGTGATCTTTACTGAGCAGACAGTGCAGTGAGAGTGTGACACTGAACAGCGTTGTAGTGCTCATTGGGCAAAGCTTTTGCATTCTGGCTTGTGCGGTGCAGGTGAACAATCCTTTTTCAGATGCTGGCAAGATTGCAAGTTACTACTAGTAGTATTTTATCAAACACTTTTTTTAGCAATACCTGACCAGTGATAGATGAAAAAAAAATCAGTAACATAATTTCA                             ]
[+] EMBL D42337               [                                                                                                                                                             TTTACTAACTGGTTCAACTTCCACGAGGGAATCAAGGATTATTCGAAATGGTCTCAAGACAGGAGAAATAGCAATGGTCATTGGAACACACAGCTTAATTGGTGATAAAACCGAATTCTCAGCTTTG GCATCTCTGTTATAGATGAGCAGCAGCGCTTTGGTGTTGTTCAAAGAGGAAGGTTTAATAGTAAGCTATAT CCCCTTCCACGAAATCGAGTCGATGATGATACAATCTCAGACGAGAATTCCGCTTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB684950             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATTCCATAAAGCAAAAATTTGAAGGTTATCCCTGTGGGCTGTTGCACGGTCGCATGAGGAGCGATGAGAAGGATGGAGCCCTCAGCAGTTTTAGATCCGGGGAAACACGTATTCTCCTCTCAACACAAGTGATTGAGATTGGAGTCGATGTTCCTGATGCTTCCATGATGGTTGTCATGAATGCTGAGAGATTTGGAATGTCTCAGCTGCACCAGTTAAGGGGTCGGGTAGGGCGTGGCGAAAGGAAATCCAGATGTGTGTTCCTATGCTCCACTCCTAGCGCGCTGCCAAGGTTGAAGGTGCTTGAGAAGTCATCCGATGGATTCTACTTGGCTAACGCCGACCTGCTACTGCGTGGCCCTGGTGATCTACTCGGCAAGAAACAGTCAGGGCATCTTCCAGAGTTTCCAATAGCTAGACTGGAGATTGATGGCAGTATTCTACAAGAAGCTCATCTTGCTGCACTTAACGTTTTGGGAACAAGCAACGACCTTGCACA ATTTCCAGGACTAAAAG TTGAGCTCAGCATGAGA   CAACCGCTGTGCATTCTTGGAGATTGACCTGTGATCTTTACTGAGCAGACAGTGCAGTGAGAGTGTGACACTGAACAGCGTTGTAGTGCTCATTGGGCAAAGCTTTTGCATTCTGGCTTGTGCGGTGCAGGTGAACAATCCTTTTTCAGATGCTGGCAAGATTGCAAGTTACTACTAGTAGTATTTTATCAAACACTTTTTTTAGCAATACCTGACCAGTGATAGATGAAAAACAAATCAGTA                                        ]
[-] EMBL CB684951             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCGGGTAGGGCGTGGCGAAAGGAAATCCAGATGTGTGTTCATATGCTCCACTCCTAGGGCGCTGCCAAGGTTGAAGGTGCTTGAGAAGTCATCCGATGGATTTTACTTGGCTAACGCCGCCCTGATACTGCGTGGCCCTGGTGATCTACTCGGCAAGAAACAGTCAGGGCATGTTCCAGAGTTTCCAATAGCTAGACTGGAGATTGATGGCAGTATTCTACAAGAAGGTCATCTTGGTGCAGTTAAAGTTTTGGGAACAAGCAAGGACCTTGCAC                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BI812920             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AACGACCTTGCACACATTTCCAGGACTAAAAGTTTGAGCTCAGCATGAGAACCCAACCGCTGTGCATTCTTGGAGATTGACCTGTGATCTTTACTGA CAGACAGTGCAGTGAGAGGGTGACACTGAACAGCGTTGTAGTGCTCATTGGGC AAGCTTTT CATTCTGGCTTGTCCGGTGCAGGTGAAC ATCCTTTTTCAGATGCTGGCAAGATTGCAAGTTACTACTAGTAGTATTTTATC AAC CTTTTTTTAGCAATACCTGACC GTGATAGATGAAAAAAAAATCAGTAACATAATTTCATTATCATCCCAAAATGCTTTCGCCAAAAA]




>consensus_8381#0
AAACCGTAGTTGCTTTCCTTGCATGCATGGAGGTCATTAGCTCAGGATTTCAGGCTGCTT
TCATGGTTCCAACGGAGGTTCTTGCCCTCCAGCATTATGAACATCTAACTTCATTGCTGG
AGAAGTTTGATGGAGATGAATGCAAACCAAACATTGCTTTACTAACTGGTTCAACTTCCA
CGAGGGAATCAAGGATTATTCGAAATGGTCTCAAGACAGGAGAAATAGCAATGGTCATTG
GAACACACAGCTTAATTGGTGATAAAACCGAATTCTCAGCTTTGCGCATCTCTGTTATAG
ATGAGCAGCAGCGCTTTGGTGTTGTTCAAAGAGGAAGGTTTAATAGTAAGCTATATACCC
CTTCCACGAAATCGAGTGATGATGATACAATCTCAGACGAGAATTCCGCTTCTGAAATAT
TTATGGCTCCCCATGTTCTTGCTATGTCCGCTACTCCAATCCCAAGAACGTTGGCTCTTG
CTCTGTATGGGGACATGTCCCTTACACAGATCACGGACTTGCCTCCAGGAAGACAACCTA
TAGAAACTCTTGCTCTTGAAGGAAATGATGCTGGTTTTGAATCTGTCTTCCAGATGATGA
GTGATGAACTGGTTGATGGAGGCAAGGTCTACCTCGTATATCCTATCATAGAAGAATCAG
AGCAGCTACCACAACTTCATGCAGCAAAAGCCGAGTTTGATTCCATAAAGCAAAAATTTG
AAGGTTATCCCTGTGGGCTGTTGCACGGTCGCATGAGGAGCGATGAGAAGGATGGAGCCC
TCAGCAGTTTTAGATCCGGGGAAACACGTATTCTCCTCTCAACACAAGTGATTGAGATTG
GAGTCGATGTTCCTGATGCTTCCATGATGGTTGTCATGAATGCTGAGAGATTTGGAATGT
CTCAGCTGCACCAGTTAAGGGGTCGGGTAGGGCGTGGCGAAAGGAAATCCAGATGTGTGT
TCCTATGCTCCACTCCTAGCGCGCTGCCAAGGTTGAAGGTGCTTGAGAAGTCATCCGATG
GATTCTACTTGGCTAACGCCGACCTGCTACTGCGTGGCCCTGGTGATCTACTCGGCAAGA
AACAGTCAGGGCATCTTCCAGAGTTTCCAATAGCTAGACTGGAGATTGATGGCAGTATTC
TACAAGAAGCTCATCTTGCTGCACTTAACGTTTTGGGAACAAGCAACGACCTTGCACAAT
TTCCAGGACTAAAAGTTGAGCTCAGCATGAGACAACCGCTGTGCATTCTTGGAGATTGAC
CTGTGATCTTTACTGAGCAGACAGTGCAGTGAGAGTGTGACACTGAACAGCGTTGTAGTG
CTCATTGGGCAAAGCTTTTGCATTCTGGCTTGTGCGGTGCAGGTGAACAATCCTTTTTCA
GATGCTGGCAAGATTGCAAGTTACTACTAGTAGTATTTTATCAAACACTTTTTTTAGCAA
TACCTGACCAGTGATAGATGAAAAAAAAATCAGTAACATAATTTCATTATCATCCCAAAA
TGCTTTCGCCAAAAA
clustalw multiple alignements is not computed in this case