These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8387#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1568 fasta sequence [TTTCCCCTGCTTCCCACTTCCTCCACGCCTCCTCCTCCTCCTCGCCTTCGCTTTCCTCCCACGCCGTCGTCGCCACCGCCGCCGCCGCCATGTCGTCGTTCGCGCACCACCACCATGGCTCGCTGGTGGAGAAGGACGGGAGGATGTCCGCGCTGAGGAGTAGCCTTAGGCCGTACGAGGCGGCCGAGGAGATGGCCGCGGCGGCGGCCGCCGGCGGGCCGGCGGCGGCGTGGGGGGCGGTGGAGAGGGGGGCAGGGATGATGGGGGACGGGTTCTCGGTGGAGGACTTGCTGGACCTTGAGGAGCTCTGTGAGGTGGACAGGGACGGCGGCGAGCAAGGCGAGGCGGCGGCGGCGGCGGCGGCCGCCGTGGAGAAGGAGAGGTCTAGTGACTCCCATGGCTCATCGGTGGTGTCGTATGAGCCCATGCCGCTGCTGCCGCCGGTGATGGACCTGCCGGCGCATGACGTGGAGGAGCTTGAGTGGGTGTCCCGTATCATGGACGACTCGCTCGCCGAGCTCCCGCTGCCGCAGCTCCCCGCGGCGGCGGCGGCGTTGGCGGCGTGCGGCAAGCCGCAGCACCGGCGGCCGCACGAAGGCGCGGCGTCGGCGTTGTTGGACCCTATGCGCACCCCGACCATTTGCGCGCTGTCGACGGAGGCGCTGGTGCCGGTGAAGTCGCGGCGGAGCAAGCGGTCGCGTGCCTCCGTGTGGTCGCTCTCCGGCGCGCCCCTGTCCGACTCGACGTCGTCGTCGTCCACCGCGACAACCTCGTCCTGCTCGTCGTCGGCCTCCTTCTCGCCGTTCCTCCAGTACGTGGACTTCCCCGCGCTAGTCGCCTCCGACCTGCTCGACGAGCAGCCGCGCTCCAAGAAGTCCAAGCACGGCAAGAACGGCAAGCAGAAGCCCAAGAAGCGC-GGGCGCAAGCCGAAGCACCAGCAGCCGCCGCACCTCGCCGCCGCCGCCGGCGGCGGCGCCGCCCTCCCCGCCACGGGCGACCGCCGCTGCAGCCACTGCGGCGTCCAGAAGACGCCCCAGTGGCGCGCCGGCCCCGAGGGCGCCAAGACGCTCTGCAACGCCTGCGGCGTCCGCTACAAGTCGGGCCGCCTCCTCCCGGAGTACCGGCCGGCCTGCAGCCCGACGTTCGTCAGCAGCCTGCACTCCAACTCCCACCGCAAGGTGCTCGAGATGCGCCGCAAGAAGGAGACCCCCGTCATCGTGGCGGCCGCCGCGCCGGCCGTCGCCTCTTTCTAGCCTAGCCTAGCTAGCACCGCCGCGGTGGCTGTACATTTTCCTTTTTCCTGGCCGTATCATTAGTCTGCTGTACCGTACCTGAACTTTTTCCTCCCTTCTCTCTATTTTAGTCCCGTCGTACGGCTAGAATTCAGTAGTAGGAAAATTAGAGGTCTCATTTAGAGATTGTGTTAGGTTTAGTGATCAACATTTGCATGTTTTAGCATTAGATTGTTATAGTGTACTCTAGTAGAAAGCACTCGAGCTCTTCACAAGAAAAGCTATTCAAAGCTGCGTCTGGCAAGAATGGCTGGGAGGCAGAGGGGTACCGATGTC] [+] EMBL AK109477 [TTTCCCCTGCTTCCCACTTCCTCCACGCCTCCTCCTCCTCCTCGCCTTCGCTTTCCTCCCACGCCGTCGTCGCCACCGCCGCCGCCGCCATGTCGTCGTTCGCGCACCACCACCATGGCTCGCTGGTGGAGAAGGACGGGAGGATGTCCGCGCTGAGGAGTAGCCTTAGGCCGTACGAGGCGGCCGAGGAGATGGCCGCGGCGGCGGCCGCCGGCGGGCCGGCGGCGGCGTGGGGGGCGGTGGAGAGGGGGGCAGGGATGATGGGGGACGGGTTCTCGGTGGAGGACTTGCTGGACCTTGAGGAGCTCTGTGAGGTGGACAGGGACGGCGGCGAGCAAGGCGAGGCGGCGGCGGCGGCGGCGGCCGCCGTGGAGAAGGAGAGGTCTAGTGACTCCCATGGCTCATCGGTGGTGTCGTATGAGCCCATGCCGCTGCTGCCGCCGGTGATGGACCTGCCGGCGCATGACGTGGAGGAGCTTGAGTGGGTGTCCCGTATCATGGACGACTCGCTCGCCGAGCTCCCGCTGCCGCAGCTCCCCGCGGCGGCGGCGGCGTTGGCGGCGTGCGGCAAGCCGCAGCACCGGCGGCCGCACGAAGGCGCGGCGTCGGCGTTGTTGGACCCTATGCGCACCCCGACCATTTGCGCGCTGTCGACGGAGGCGCTGGTGCCGGTGAAGTCGCGGCGGAGCAAGCGGTCGCGTGCCTCCGTGTGGTCGCTCTCCGGCGCGCCCCTGTCCGACTCGACGTCGTCGTCGTCCACCGCGACAACCTCGTCCTGCTCGTCGTCGGCCTCCTTCTCGCCGTTCCTCCAGTACGTGGACTTCCCCGCGCTAGTCGCCTCCGACCTGCTCGACGAGCAGCCGCGCTCCAAGAAGTCCAAGCACGGCAAGAACGGCAAGCAGAAGCCCAAGAAGCGC GGGCGCAAGCCGAAGCACCAGCAGCCGCCGCACCTCGCCGCCGCCGCCGGCGGCGGCGCCGCCCTCCCCGCCACGGGCGACCGCCGCTGCAGCCACTGCGGCGTCCAGAAGACGCCCCAGTGGCGCGCCGGCCCCGAGGGCGCCAAGACGCTCTGCAACGCCTGCGGCGTCCGCTACAAGTCGGGCCGCCTCCTCCCGGAGTACCGGCCGGCCTGCAGCCCGACGTTCGTCAGCAGCCTGCACTCCAACTCCCACCGCAAGGTGCTCGAGATGCGCCGCAAGAAGGAGACCCCCGTCATCGTGGCGGCCGCCGCGCCGGCCGTCGCCTCTTTCTAGCCTAGCCTAGCTAGCACCGCCGCGGTGGCTGTACATTTTCCTTTTTCCTGGCCGTATCGTTAGTCTGCTGTACCGTACCTGAACTTTTTCCTCCCTTCTCTCTATTTTAGTCCCGTCGTACGGCTAGAATTCAGTAGTAGGAAAATTAGAGGTCTCATTTAGAGATTGTGTTAGGTTTAGTGATCAACATTTGCATGTTTTAGCATTAGATTGTTATAGTGTACTCTAGTAGAAAGCACTCGAGCTCTTCAC ] [+] EMBL CB651351 [ TCCTCCTCCTCCTCGCCTTCGCTTTCCTCCCACGCCGTCGTCGCCACCGCCGCCGCCGCCATGTCGTCGTTCGCGCACCACCACCATGGCTCGCTGGTGGAGAAGGACGGGAGGATGTCCGCGCTGAGGAGTAGCCTTAGGCCGTACGAGGCGGCCGAGGAGATGGCCGCGGCGGCGGCCGCCGGCGGGCCGGCGGCGGCGTGGGGGGCGGTGGAGAGGGGGGCAGGGATGATGGGGGACGGGTTCTCGGTGGAGGACTTGCTGGACCTTGAGGAGCTCTGTGAGGTGGACAGGGACGGCGGCGAGCAAGGCGAGGCGGCGG ] [+] EMBL CB646474 [ CACGCCGTCGTCGCCACCGCCGCCGCCGCCACCCCGAAGATCGCGCACCACCACCATGGCTCGCTGGTGGAGAAGGACGGGAGGATGTCCGCGCTGAGGAGTAGCCTTAGGCCGTACGAGGCGGCCGAGGAGATGGCCGCGGCGGCGGCCGCCGGCGGGCCGGCGGCGGCGTGGGGGGCGGTGGAGAGGGGGGCACGGATGATGGGGGACGGGTTCTCGGTGGAGGACTTGCTGGACCTTGAGGAGCTCTGTGAGGTGGACAGGGACGGCGGCGAGCAA ] [-] EMBL CB646475 [ TCCAAGCACGGCAAGAACGGCAAGCAGAAGCCCAAGAAGCGCGGGGGGCAAGCTGAAGCACCAGCAGCCGCCGCACCTCGCCGCCGCCGCCGGCGGCGGCGCCGCCCTCCCCGCCACGGGCGACCGCCGCTGCAGCCACTGCGGCGTCCAGAAGACGCCCCAGTGGCGCGCCGGCCCCGAGGGCGCCAAGACGCTCTGCAACGCCTGCGGCGTCCGCTACAAGTCGGGCCGCCTCCTCCCGGAGTACCGGCCGGCCTGCAGCCCGACGTTCGTCAGCAGCCTGCACTCCAACTCCCACCGCAAGGTGCTCGAGATGCGCCGCAAGAAGGAGACCCCCGTCATCGTGGCGGCCGCCGCGCCGGCCGTCGCCTCTTTCTAGCCTAGCCTAGCTAGCACCGCCGCGGTGGCTGTACATTTTCCTTTTTCCTGGCCGTATCATTAGTCTGCTGTACCGTACCTGAACTTTTTCCTCCCTTCTCTGGATTTTAGTCCCGTCGTACGGCTAGAATTCAGTAGTAGGAAAATTAGAGGTCTCATTTAGAGATTGTTTAAGGGTTAGTGATCAAC ] [-] EMBL CB651352 [ AGCACGGCAAGAACGGCAAGCAGAAGCCCAAGAAGCGC GGGCGCAAGCCGAAGCACCAGCAGCCGCCGCACCTCGCCGCCGCCGCCGGCGGCGGCGCCGCCCTCCCCGCCACGGGCGACCGCCGCTGCAGCCACTGCGGCGTCCAGAAGACGCCCCAGTGGCGCGCCGGCCCCGAGGGCGCCAAGACGCTCTGCAACGCCTGCGGCGTCCGCTACAAGTCGGGCCGCCTCCTCCCGGAGTACCGGCCGGCCTGCAGCCCGACGTTCGTCAGCAGCCTGCACTCCAACTCCCACCGCAAGGTGCTCGAGATGCGCCGCAAGAAGGAGACCCCCGTCATCGTGGCGGCCGCCGCGCCGGCCGTCGCCTCTTTTTAGCCTAGCCTAGCTAGCACCGCCGCGGTGGCTGTACATTTTCCTTTTTCCTGGCCGTATCATTAGTCTGCTGTACCGTACCTGAACTTTTTCCTCCCTTCTCTCTATTTTAGTCCCGTCGTACGGCTAGAATTCAGTAGTAGGAAAATTAGAGGTCTCATTTAGAGATTGTGTTAGGTTTAGTGATCAACATTTGCATGTTTTAGCATTAGATTGTTATAGTGTACTCTAGTAGAAAGCACTCGAGCTCTTCACAAGAAAAGCTATTCAAAGCTGCGTCTGGCAAGAATGGCTGGGAGGCAGAGGGGTACCGATGTC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||