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Oryza sativa
cluster # 8387 cluster # 8387       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8387#0 length = 1568 sequences # 5  

consensusID : consensus_8387#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1568
fasta sequence
                              [TTTCCCCTGCTTCCCACTTCCTCCACGCCTCCTCCTCCTCCTCGCCTTCGCTTTCCTCCCACGCCGTCGTCGCCACCGCCGCCGCCGCCATGTCGTCGTTCGCGCACCACCACCATGGCTCGCTGGTGGAGAAGGACGGGAGGATGTCCGCGCTGAGGAGTAGCCTTAGGCCGTACGAGGCGGCCGAGGAGATGGCCGCGGCGGCGGCCGCCGGCGGGCCGGCGGCGGCGTGGGGGGCGGTGGAGAGGGGGGCAGGGATGATGGGGGACGGGTTCTCGGTGGAGGACTTGCTGGACCTTGAGGAGCTCTGTGAGGTGGACAGGGACGGCGGCGAGCAAGGCGAGGCGGCGGCGGCGGCGGCGGCCGCCGTGGAGAAGGAGAGGTCTAGTGACTCCCATGGCTCATCGGTGGTGTCGTATGAGCCCATGCCGCTGCTGCCGCCGGTGATGGACCTGCCGGCGCATGACGTGGAGGAGCTTGAGTGGGTGTCCCGTATCATGGACGACTCGCTCGCCGAGCTCCCGCTGCCGCAGCTCCCCGCGGCGGCGGCGGCGTTGGCGGCGTGCGGCAAGCCGCAGCACCGGCGGCCGCACGAAGGCGCGGCGTCGGCGTTGTTGGACCCTATGCGCACCCCGACCATTTGCGCGCTGTCGACGGAGGCGCTGGTGCCGGTGAAGTCGCGGCGGAGCAAGCGGTCGCGTGCCTCCGTGTGGTCGCTCTCCGGCGCGCCCCTGTCCGACTCGACGTCGTCGTCGTCCACCGCGACAACCTCGTCCTGCTCGTCGTCGGCCTCCTTCTCGCCGTTCCTCCAGTACGTGGACTTCCCCGCGCTAGTCGCCTCCGACCTGCTCGACGAGCAGCCGCGCTCCAAGAAGTCCAAGCACGGCAAGAACGGCAAGCAGAAGCCCAAGAAGCGC-GGGCGCAAGCCGAAGCACCAGCAGCCGCCGCACCTCGCCGCCGCCGCCGGCGGCGGCGCCGCCCTCCCCGCCACGGGCGACCGCCGCTGCAGCCACTGCGGCGTCCAGAAGACGCCCCAGTGGCGCGCCGGCCCCGAGGGCGCCAAGACGCTCTGCAACGCCTGCGGCGTCCGCTACAAGTCGGGCCGCCTCCTCCCGGAGTACCGGCCGGCCTGCAGCCCGACGTTCGTCAGCAGCCTGCACTCCAACTCCCACCGCAAGGTGCTCGAGATGCGCCGCAAGAAGGAGACCCCCGTCATCGTGGCGGCCGCCGCGCCGGCCGTCGCCTCTTTCTAGCCTAGCCTAGCTAGCACCGCCGCGGTGGCTGTACATTTTCCTTTTTCCTGGCCGTATCATTAGTCTGCTGTACCGTACCTGAACTTTTTCCTCCCTTCTCTCTATTTTAGTCCCGTCGTACGGCTAGAATTCAGTAGTAGGAAAATTAGAGGTCTCATTTAGAGATTGTGTTAGGTTTAGTGATCAACATTTGCATGTTTTAGCATTAGATTGTTATAGTGTACTCTAGTAGAAAGCACTCGAGCTCTTCACAAGAAAAGCTATTCAAAGCTGCGTCTGGCAAGAATGGCTGGGAGGCAGAGGGGTACCGATGTC]

[+] EMBL AK109477             [TTTCCCCTGCTTCCCACTTCCTCCACGCCTCCTCCTCCTCCTCGCCTTCGCTTTCCTCCCACGCCGTCGTCGCCACCGCCGCCGCCGCCATGTCGTCGTTCGCGCACCACCACCATGGCTCGCTGGTGGAGAAGGACGGGAGGATGTCCGCGCTGAGGAGTAGCCTTAGGCCGTACGAGGCGGCCGAGGAGATGGCCGCGGCGGCGGCCGCCGGCGGGCCGGCGGCGGCGTGGGGGGCGGTGGAGAGGGGGGCAGGGATGATGGGGGACGGGTTCTCGGTGGAGGACTTGCTGGACCTTGAGGAGCTCTGTGAGGTGGACAGGGACGGCGGCGAGCAAGGCGAGGCGGCGGCGGCGGCGGCGGCCGCCGTGGAGAAGGAGAGGTCTAGTGACTCCCATGGCTCATCGGTGGTGTCGTATGAGCCCATGCCGCTGCTGCCGCCGGTGATGGACCTGCCGGCGCATGACGTGGAGGAGCTTGAGTGGGTGTCCCGTATCATGGACGACTCGCTCGCCGAGCTCCCGCTGCCGCAGCTCCCCGCGGCGGCGGCGGCGTTGGCGGCGTGCGGCAAGCCGCAGCACCGGCGGCCGCACGAAGGCGCGGCGTCGGCGTTGTTGGACCCTATGCGCACCCCGACCATTTGCGCGCTGTCGACGGAGGCGCTGGTGCCGGTGAAGTCGCGGCGGAGCAAGCGGTCGCGTGCCTCCGTGTGGTCGCTCTCCGGCGCGCCCCTGTCCGACTCGACGTCGTCGTCGTCCACCGCGACAACCTCGTCCTGCTCGTCGTCGGCCTCCTTCTCGCCGTTCCTCCAGTACGTGGACTTCCCCGCGCTAGTCGCCTCCGACCTGCTCGACGAGCAGCCGCGCTCCAAGAAGTCCAAGCACGGCAAGAACGGCAAGCAGAAGCCCAAGAAGCGC GGGCGCAAGCCGAAGCACCAGCAGCCGCCGCACCTCGCCGCCGCCGCCGGCGGCGGCGCCGCCCTCCCCGCCACGGGCGACCGCCGCTGCAGCCACTGCGGCGTCCAGAAGACGCCCCAGTGGCGCGCCGGCCCCGAGGGCGCCAAGACGCTCTGCAACGCCTGCGGCGTCCGCTACAAGTCGGGCCGCCTCCTCCCGGAGTACCGGCCGGCCTGCAGCCCGACGTTCGTCAGCAGCCTGCACTCCAACTCCCACCGCAAGGTGCTCGAGATGCGCCGCAAGAAGGAGACCCCCGTCATCGTGGCGGCCGCCGCGCCGGCCGTCGCCTCTTTCTAGCCTAGCCTAGCTAGCACCGCCGCGGTGGCTGTACATTTTCCTTTTTCCTGGCCGTATCGTTAGTCTGCTGTACCGTACCTGAACTTTTTCCTCCCTTCTCTCTATTTTAGTCCCGTCGTACGGCTAGAATTCAGTAGTAGGAAAATTAGAGGTCTCATTTAGAGATTGTGTTAGGTTTAGTGATCAACATTTGCATGTTTTAGCATTAGATTGTTATAGTGTACTCTAGTAGAAAGCACTCGAGCTCTTCAC                                                               ]
[+] EMBL CB651351             [                             TCCTCCTCCTCCTCGCCTTCGCTTTCCTCCCACGCCGTCGTCGCCACCGCCGCCGCCGCCATGTCGTCGTTCGCGCACCACCACCATGGCTCGCTGGTGGAGAAGGACGGGAGGATGTCCGCGCTGAGGAGTAGCCTTAGGCCGTACGAGGCGGCCGAGGAGATGGCCGCGGCGGCGGCCGCCGGCGGGCCGGCGGCGGCGTGGGGGGCGGTGGAGAGGGGGGCAGGGATGATGGGGGACGGGTTCTCGGTGGAGGACTTGCTGGACCTTGAGGAGCTCTGTGAGGTGGACAGGGACGGCGGCGAGCAAGGCGAGGCGGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB646474             [                                                           CACGCCGTCGTCGCCACCGCCGCCGCCGCCACCCCGAAGATCGCGCACCACCACCATGGCTCGCTGGTGGAGAAGGACGGGAGGATGTCCGCGCTGAGGAGTAGCCTTAGGCCGTACGAGGCGGCCGAGGAGATGGCCGCGGCGGCGGCCGCCGGCGGGCCGGCGGCGGCGTGGGGGGCGGTGGAGAGGGGGGCACGGATGATGGGGGACGGGTTCTCGGTGGAGGACTTGCTGGACCTTGAGGAGCTCTGTGAGGTGGACAGGGACGGCGGCGAGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB646475             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCCAAGCACGGCAAGAACGGCAAGCAGAAGCCCAAGAAGCGCGGGGGGCAAGCTGAAGCACCAGCAGCCGCCGCACCTCGCCGCCGCCGCCGGCGGCGGCGCCGCCCTCCCCGCCACGGGCGACCGCCGCTGCAGCCACTGCGGCGTCCAGAAGACGCCCCAGTGGCGCGCCGGCCCCGAGGGCGCCAAGACGCTCTGCAACGCCTGCGGCGTCCGCTACAAGTCGGGCCGCCTCCTCCCGGAGTACCGGCCGGCCTGCAGCCCGACGTTCGTCAGCAGCCTGCACTCCAACTCCCACCGCAAGGTGCTCGAGATGCGCCGCAAGAAGGAGACCCCCGTCATCGTGGCGGCCGCCGCGCCGGCCGTCGCCTCTTTCTAGCCTAGCCTAGCTAGCACCGCCGCGGTGGCTGTACATTTTCCTTTTTCCTGGCCGTATCATTAGTCTGCTGTACCGTACCTGAACTTTTTCCTCCCTTCTCTGGATTTTAGTCCCGTCGTACGGCTAGAATTCAGTAGTAGGAAAATTAGAGGTCTCATTTAGAGATTGTTTAAGGGTTAGTGATCAAC                                                                                                                               ]
[-] EMBL CB651352             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGCACGGCAAGAACGGCAAGCAGAAGCCCAAGAAGCGC GGGCGCAAGCCGAAGCACCAGCAGCCGCCGCACCTCGCCGCCGCCGCCGGCGGCGGCGCCGCCCTCCCCGCCACGGGCGACCGCCGCTGCAGCCACTGCGGCGTCCAGAAGACGCCCCAGTGGCGCGCCGGCCCCGAGGGCGCCAAGACGCTCTGCAACGCCTGCGGCGTCCGCTACAAGTCGGGCCGCCTCCTCCCGGAGTACCGGCCGGCCTGCAGCCCGACGTTCGTCAGCAGCCTGCACTCCAACTCCCACCGCAAGGTGCTCGAGATGCGCCGCAAGAAGGAGACCCCCGTCATCGTGGCGGCCGCCGCGCCGGCCGTCGCCTCTTTTTAGCCTAGCCTAGCTAGCACCGCCGCGGTGGCTGTACATTTTCCTTTTTCCTGGCCGTATCATTAGTCTGCTGTACCGTACCTGAACTTTTTCCTCCCTTCTCTCTATTTTAGTCCCGTCGTACGGCTAGAATTCAGTAGTAGGAAAATTAGAGGTCTCATTTAGAGATTGTGTTAGGTTTAGTGATCAACATTTGCATGTTTTAGCATTAGATTGTTATAGTGTACTCTAGTAGAAAGCACTCGAGCTCTTCACAAGAAAAGCTATTCAAAGCTGCGTCTGGCAAGAATGGCTGGGAGGCAGAGGGGTACCGATGTC]


>consensus_8387#0 TTTCCCCTGCTTCCCACTTCCTCCACGCCTCCTCCTCCTCCTCGCCTTCGCTTTCCTCCC ACGCCGTCGTCGCCACCGCCGCCGCCGCCATGTCGTCGTTCGCGCACCACCACCATGGCT CGCTGGTGGAGAAGGACGGGAGGATGTCCGCGCTGAGGAGTAGCCTTAGGCCGTACGAGG CGGCCGAGGAGATGGCCGCGGCGGCGGCCGCCGGCGGGCCGGCGGCGGCGTGGGGGGCGG TGGAGAGGGGGGCAGGGATGATGGGGGACGGGTTCTCGGTGGAGGACTTGCTGGACCTTG AGGAGCTCTGTGAGGTGGACAGGGACGGCGGCGAGCAAGGCGAGGCGGCGGCGGCGGCGG CGGCCGCCGTGGAGAAGGAGAGGTCTAGTGACTCCCATGGCTCATCGGTGGTGTCGTATG AGCCCATGCCGCTGCTGCCGCCGGTGATGGACCTGCCGGCGCATGACGTGGAGGAGCTTG AGTGGGTGTCCCGTATCATGGACGACTCGCTCGCCGAGCTCCCGCTGCCGCAGCTCCCCG CGGCGGCGGCGGCGTTGGCGGCGTGCGGCAAGCCGCAGCACCGGCGGCCGCACGAAGGCG CGGCGTCGGCGTTGTTGGACCCTATGCGCACCCCGACCATTTGCGCGCTGTCGACGGAGG CGCTGGTGCCGGTGAAGTCGCGGCGGAGCAAGCGGTCGCGTGCCTCCGTGTGGTCGCTCT CCGGCGCGCCCCTGTCCGACTCGACGTCGTCGTCGTCCACCGCGACAACCTCGTCCTGCT CGTCGTCGGCCTCCTTCTCGCCGTTCCTCCAGTACGTGGACTTCCCCGCGCTAGTCGCCT CCGACCTGCTCGACGAGCAGCCGCGCTCCAAGAAGTCCAAGCACGGCAAGAACGGCAAGC AGAAGCCCAAGAAGCGCGGGCGCAAGCCGAAGCACCAGCAGCCGCCGCACCTCGCCGCCG CCGCCGGCGGCGGCGCCGCCCTCCCCGCCACGGGCGACCGCCGCTGCAGCCACTGCGGCG TCCAGAAGACGCCCCAGTGGCGCGCCGGCCCCGAGGGCGCCAAGACGCTCTGCAACGCCT GCGGCGTCCGCTACAAGTCGGGCCGCCTCCTCCCGGAGTACCGGCCGGCCTGCAGCCCGA CGTTCGTCAGCAGCCTGCACTCCAACTCCCACCGCAAGGTGCTCGAGATGCGCCGCAAGA AGGAGACCCCCGTCATCGTGGCGGCCGCCGCGCCGGCCGTCGCCTCTTTCTAGCCTAGCC TAGCTAGCACCGCCGCGGTGGCTGTACATTTTCCTTTTTCCTGGCCGTATCATTAGTCTG CTGTACCGTACCTGAACTTTTTCCTCCCTTCTCTCTATTTTAGTCCCGTCGTACGGCTAG AATTCAGTAGTAGGAAAATTAGAGGTCTCATTTAGAGATTGTGTTAGGTTTAGTGATCAA CATTTGCATGTTTTAGCATTAGATTGTTATAGTGTACTCTAGTAGAAAGCACTCGAGCTC TTCACAAGAAAAGCTATTCAAAGCTGCGTCTGGCAAGAATGGCTGGGAGGCAGAGGGGTA CCGATGTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)