cluster # 8400

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Oryza sativa
cluster # 8400 cluster # 8400 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8400#0 length = 1751 sequences # 5
consensusID : consensus_8400#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1751
fasta sequence
                              [ACGATTTTGCTATCCCGCAGTCCGCGCGCGCACCCGTTTCCTCCAACGACTGATCTGCTGCGAGAAGCGTGGCCATGGCCATGGTGGAGAAGACGGTGCTGCTCTACCCTTGCCCTGCGGTGGGCCATCTCAACCCCATGGTGCAGCTCGCCGAGGCCCTCGTCCGCCGCGGTGTCTCCGTCACCCTCGCCGTCGCCGACCCGCCTGACAAGGGCGCTGTGCTGGCCGGCGCGATCGCCCGCATCGCCGCCGTGTGCCCCTCCATCGGTGTCCGCCTCCTTCCCATCCCGTCCTGCGAGGGCAAGACGTACTCCCACCCCGTCATGTGGATCGTCGACGCGCTCCGCCTCGCCAACCCCGTGCTCCGGGAGCTCCTGCGCTCGTTCCCTGCTGCCGTCGACGCTCTCGTGGTCGACATG-TTCTGCATCGACGCGCTCGACGTCGCCGCCGAGCTCGCCGTCCCGGCCTACATGTTCTA-CCCGTC-TGCGGCCAGCGACC-TAGCGATCTACC-TCCAGGTTCCGCATGTCGCCCGCTCGGCTCCATCCTCTTTCAAGGACATGGCCGACACGGTGCTGAGCTTCTCCGGCGTGCCGACGATTCGCGCGCTGGACATGCCGGACACCATGCAAGACAGGGAGAGCGACGTGGGCACGACCCGGATTCACCACTGCTCCCGGATGGCTGAAGCGAGAGGCATTCTGGTGAACAGCTTCGATTGGTTGGAGACGAGGGCCCTGAAAGCGATCCGCGGCGGCCTCTGCCTGCCGTCCGGCCGCTCGGTGCCCGCGATCTACTGCGTTGGGCCGCTGGTCGATGGGGGCAAGCTCAAGGAGAACGACGCGCGGCACGAGTGCCTCGAGTGGCTGGACCGCCAACCGAAGCAGAGCGTGGTGTTCCTCTGCTTCGGGAGCAGGGGCACTTTCTCGGTGTCGCAGCTGAGCGAGATGGCTCGGGGGATAGAGAACTCCGGACACAGATTCCTGTGGGCTGTGCGTAGCAACCTCGGCGAGGTGGACTTGGAGGCGTTGTTTCCGGAAGGGTTCTTGGAGAGGACCCAAGGCAGGGGATTCGTCGTGAAGAACTGGGCGCCGCAGTCGGCGGTGCTGCAGCACGGCGCCGTCGGCGCGTTCGTGACGCACTGCGGGTGGAACTCGTCGCTGGAGGCGATCATGTCCGGCGTGCCGATGATCTGCTGGCCGCTGTACGCGGAGCAGAGGCTGAACAAAGCGCACCTGGTGGAGGAGATGAAGCTTGGGGTGTTGGTGGAGGGCTACGACGGCGAGCTTGTTAAGGCCGACGAGCTGGAGACCAAGGTTCGGCTGGTGATGGAGTCGGAGGAAGGGAAGAGGCTTAGGGAGAGGTCGGCGATGGCCAAGGAGATGGCTGCTGATGCCGTCAAAGATGGGGGTTCGTCTGACATGGCGTTCGCCGAATTCCTGAACAATTTGGGGACGAACAACGTGAAAAGCGGCCCGAGAGATACACCCGTGCATGACTGAAACACTGTAGCCGAGTTGGTTTTAGCAGGACCGAGAATAATGTTCTTCAGTATATTTAGATTTCGTCAGATTTTAGAGTTGTTCATGTCGTGATGTGGCCGAATCTGTATGAGACTACGGTGCAACTATGCTAGCGCATCTCATGCAAAGTCCGGGCATCCTTACAGAGAACACACTAATTTATTTCCCAGTTTTTTCTCCCTCATGCAACTATACTTTAGGTTGATACTTGAGAATTTGAACTTTGAAGCA]

[+] EMBL AK103355             [ACGATTTTGCTATCCCGCAGTCCGCGCGCGCACCCGTTTCCTCCAACGACTGATCTGCTGCGAGAAGCGTGGCCATGGCCATGGTGGAGAAGACGGTGCTGCTCTACCCTTGCCCTGCGGTGGGCCATCTCAACCCCATGGTGCAGCTCGCCGAGGCCCTCGTCCGCCGCGGTGTCTCCGTCACCCTCGCCGTCGCCGACCCGCCTGACAAGGGCGCTGTGCTGGCCGGCGCGATCGCCCGCATCGCCGCCGTGTGCCCCTCCATCGGTGTCCGCCTCCTTCCCATCCCGTCCTGCGAGGGCAAGACGTACTCCCACCCCGTCATGTGGATCGTCGACGCGCTCCGCCTCGCCAACCCCGTGCTCCGGGAGCTCCTGCGCTCGTTCCCTGCTGCCGTCGACGCTCTCGTGGTCGACATG TTCTGCATCGACGCGCTCGACGTCGCCGCCGAGCTCGCCGTCCCGGCCTACATGTTCTA CCCGTC TGCGGCCAGCGACC TAGCGATCTACC TCCAGGTTCCGCATGTCGCCCGCTCGGCTCCATCCTCTTTCAAGGACATGGCCGACACGGTGCTGAGCTTCTCCGGCGTGCCGACGATTCGCGCGCTGGACATGCCGGACACCATGCAAGACAGGGAGAGCGACGTGGGCACGACCCGGATTCACCACTGCTCCCGGATGGCTGAAGCGAGAGGCATTCTGGTGAACAGCTTCGATTGGTTGGAGACGAGGGCCCTGAAAGCGATCCGCGGCGGCCTCTGCCTGCCGTCCGGCCGCTCGGTGCCCGCGATCTACTGCGTTGGGCCGCTGGTCGATGGGGGCAAGCTCAAGGAGAACGACGCGCGGCACGAGTGCCTCGAGTGGCTGGACCGCCAACCGAAGCAGAGCGTGGTGTTCCTCTGCTTCGGGAGCAGGGGCACTTTCTCGGTGTCGCAGCTGAGCGAGATGGCTCGGGGGATAGAGAACTCCGGACACAGATTCCTGTGGGCTGTGCGTAGCAACCTCGGCGAGGTGGACTTGGAGGCGTTGTTTCCGGAAGGGTTCTTGGAGAGGACCCAAGGCAGGGGATTCGTCGTGAAGAACTGGGCGCCGCAGTCGGCGGTGCTGCAGCACGGCGCCGTCGGCGCGTTCGTGACGCACTGCGGGTGGAACTCGTCGCTGGAGGCGATCATGTCCGGCGTGCCGATGATCTGCTGGCCGCTGTACGCGGAGCAGAGGCTGAACAAAGCGCACCTGGTGGAGGAGATGAAGCTTGGGGTGTTGGTGGAGGGCTACGACGGCGAGCTTGTTAAGGCCGACGAGCTGGAGACCAAGGTTCGGCTGGTGATGGAGTCGGAGGAAGGGAAGAGGCTTAGGGAGAGGTCGGCGATGGCCAAGGAGATGGCTGCTGATGCCGTCAAAGATGGGGGTTCGTCTGACATGGCGTTCGCCGAATTCCTGAACAATTTGGGGACGAACAACGTGAAAAGCGGCCCGAGAGATACACCCGTGCATGACTGAAACACTGTAGCCGAGTTGGTTTTAGCAGGACCGAGAATAATGTTCTTCAGTATATTTAGATTTCGTCAGATTTTAGAGTTGTTCATGTCGTGATGTGGCCGAATCTGTATGAGACTACGGTGCAACTATGCTAGCGCATCTCATGCAAAGTCCGGGCATCCTTACAGAGAACACACTAATTTATTTCCCA                                                              ]
[+] EMBL AK064298             [                                                     TCTGCTGCGAGAAGCGTGGCCATGGCCATGGTGGAGAAGACGGTGCTGCTCTACCCTTGCCCTGCGGTGGGCCATCTCAACCCCATGGTGCAGCTCGCCGAGGCCCTCGTCCGCCGCGGTGTCTCCGTCACCCTCGCCGTCGCCGACCCGCCTGACAAGGGCGCTGTGCTGGCCGGCGCGATCGCCCGCATCGCCGCCGTGTGCCCCTCCATCGGTGTCCGCCTCCTTCCCATCCCGTCCTGCGAGGGCAAGACGTACTCCCACCCCGTCATGTGGATCGTCGACGCGCTCCGCCTCGCCAACCCCGTGCTCCGGGAGCTCCTGCGCTCGTTCCCTGCTGCCGTCGACGCTCTCGTGGTCGACATG TTCTGCATCGACGCGCTCGACGTCGCCGCCGAGCTCGCCGTCCCGGCCTACATGTTCTA CCCGTC TGCGGCCAGCGACC TAGCGATCTACC TCCAGGTTCCGCATGTCGCCCGCTCGGCTCCATCCTCTTTCAAGGACATGGCCGACACGGTGCTGAGCTTCTCCGGCGTGCCGACGATTCGCGCGCTGGACATGCCGGACACCATGCAAGACAGGGAGAGCGACGTGGGCACGACCCGGATTCACCACTGCTCCCGGATGGCTGAAGCGAGAGGCATTCTGGTGAACAGCTTCGATTGGTTGGAGACGAGGGCCCTGAAAGCGATCCGCGGCGGCCTCTGCCTGCCGTCCGGCCGCTCGGTGCCCGCGATCTACTGCGTTGGGCCGCTGGTCGATGGGGGCAAGCTCAAGGAGAACGACGCGCGGCACGAGTGCCTCGAGTGGCTGGACCGCCAACCGAAGCAGAGCGTGGTGTTCCTCTGCTTCGGGAGCAGGGGCACTTTCTCGGTGTCGCAGCTGAGCGAGATGGCTCGGGGGATAGAGAACTCCGGACACAGATTCCTGTGGGCTGTGCGTAGCAACCTCGGCGAGGTGGACTTGGAGGCGTTGTTTCCGGAAGGGTTCTTGGAGAGGACCCAAGGCAGGGGATTCGTCGTGAAGAACTGGGCGCCGCAGTCGGCGGTGCTGCAGCACGGCGCCGTCGGCGCGTTCGTGACGCACTGCGGGTGGAACTCGTCGCTGGAGGCGATCATGTCCGGCGTGCCGATGATCTGCTGGCCGCTGTACGCGGAGCAGAGGCTGAACAAAGCGCACCTGGTGGAGGAGATGAAGCTTGGGGTGTTGGTGGAGGGCTACGACGGCGAGCTTGTTAAGGCCGACGAGCTGGAGACCAAGGTTCGGCTGGTGATGGAGTCGGAGGAAGGGAAGAGGCTTAGGGAGAGGTCGGCGATGGCCAAGGAGATGGCTGCTGATGCCGTCAAAGATGGGGGTTCGTCTGACATGGCGTTCGCCGAATTCCTGAACAATTTGGGGACGAACAACGTGAAAAGCGGCCCGAGAGATACACCCGTGCATGACTGAAACACTGTAGCCGAGTTGGTTTTAGCAGGACCGAGAATAATGTTCTTCAGTATATTTAGATTTCGTCAGATTTTAGAGTTGTTCATGTCGTGATGTGGCCGAATCTGTATGAGACTACGGTGCAACTATGCTAGCGCATCTCATGCAAAGTCCGGGCATCCTTACAGAGAACACACTAATTTATTTCCCAGTTTTTTCTCCCTCATGCAACTATACTTTAGGTTGATACTTGAGAATTTGAACTTTGAAGCA]
[+] EMBL AK099365             [                                                           GCGAGAAGCGTGGCCATGGCCATGGTGGAGAAGACGGTGCTGCTCTACCCTTGCCCTGCGGTGGGCCATCTCAACCCCATGGTGCAGCTCGCCGAGGCCCTCGTCCGCCGCGGTGTCTCCGTCACCCTCGCCGTCGCCGACCCGCCTGACAAGGGCGCTGTGCTGGCCGGCGCGATCGCCCGCATCGCCGCCGTGTGCCCCTCCATCGGTGTCCGCCTCCTTCCCATCCCGTCCTGCGAGGGCAAGACGTACTCCCACCCCGTCATGTGGATCGTCGACGCGCTCCGCCTCGCCAACCCCGTGCTCCGGGAGCTCCTGCGCTCGTTCCCTGCTGCCGTCGACGCTCTCGTGGTCGACATG TTCTGCATCGACGCGCTCGACGTCGCCGCCGAGCTCGCCGTCCCGGCCTACATGTTCTA CCCGTC TGCGGCCAGCGACC TAGCGATCTACC TCCAGGTTCCGCATGTCGCCCGCTCGGCTCCATCCTCTTTCAAGGACATGGCCGACACGGTGCTGAGCTTCTCCGGCGTGCCGACGATTCGCGCGCTGGACATGCCGGACACCATGCAAGACAGGGAGAGCGACGTGGGCACGACCCGGATTCACCACTGCTCCCGGATGGCTGAAGCGAGAGGCATTCTGGTGAACAGCTTCGATTGGTTGGAGACGAGGGCCCTGAAAGCGATCCGCGGCGGCCTCTGCCTGCCGTCCGGCCGCTCGGTGCCCGCGATCTACTGCGTTGGGCCGCTGGTCGATGGGGGCAAGCTCAAGGAGAACGACGCGCGGCACGAGTGCCTCGAGTGGCTGGACCGCCAACCGAAGCAGAGCGTGGTGTTCCTCTGCTTCGGGAGCAGGGGCACTTTCTCGGTGTCGCAGCTGAGCGAGATGGCTCGGGGGATAGAGAACTCCGGACACAGATTCCTGTGGGCTGTGCGTAGCAACCTCGGCGAGGTGGACTTGGAGGCGTTGTTTCCGGAAGGGTTCTTGGAGAGGACCCAAGGCAGGGGATTCGTCGTGAAGAACTGGGCGCCGCAGTCGGCGGTGCTGCAGCACGGCGCCGTCGGCGCGTTCGTGACGCACTGCGGGTGGAACTCGTCGCTGGAGGCGATCATGTCCGGCGTGCCGATGATCTGCTGGCCGCTGTACGCGGAGCAGAGGCTGAACAAAGCGCACCTGGTGGAGGAGATGAAGCTTGGGGTGTTGGTGGAGGGCTACGACGGCGAGCTTGTTAAGGCCGACGAGCTGGAGACCAAGGTTCGGCTGGTGATGGAGTCGGAGGAAGGGAAGAGGCTTAGGGAGAGGTCGGCGATGGCCAAGGAGATGGCTGCTGATGCCGTCAAAGATGGGGGTTCGTCTGACATGGCGTTCGCCGAATTCCTGAACAATTTGGGGACGAACAACGTGAAAAGCGGCCCGAGAGATACACCCGTGCATGACTGAAACACTGTAGCCGAGTTGGTTTTAGCAGGACCGAGAATAATGTTCTTCAGTATATTTAGATTTCGTCAGATTTTAGAGTTGTTCATGTCGTGATGTGGCCGAATCTGTATGAGACTACGGTGCAACTATGCTAGCGCATCTCATGCAAAGTCCGGGCATCCTTACAGAGAACACACTAATTTATTTCCCAGT                                                            ]
[+] EMBL AU181667             [                                                                  GCGTGGCCATGGCCATGGTGGAGAAGACGGTGCTGCTCTACCCTTGCCCTGCGGTGGGCCATCTCAACCCCATGGTGCAGCTCGCCGAGGCCCTCGTCCGCCGCGGTGTCTCCGTCACCCTCGCCGTCGCCGACCCGCCTGACAAGGGCGCTGTGCTGGCCGGCGCGATCGCCCGCATCGCCGCCGTGTGCCCCTCCATCGGTGTCCGCCTCCTTCCCATCCCGTCCTGCGAGGGCAAGACGTACTCCCACCCCGTCATGTGGATCGTCGACGCGCTCCG CTCGCCAACCCCGTGCTCCGGGAGCTCCTGCGCTCGTTCCCTGCTGCCGTCGACGCTCTCGTGGTCGACATGTTTCTGCATCGACGCGCTCGACGTNGCCGCCGAGCTCGCCGTCCCGGCCTACATGTTCTACCCCGTCTTGCNGCCAGCGACCTTAGCGATCTACCTTCCAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU173785             [                                                                   CGTGGCCATGGCCATGGTGGAGAAGACGGTGCTGCTCTACCCTTGCCCTGCGGTGGGCCATCTCAACCCCATGGTGCAGCTCGCCGAGGCCCTCGTCCGCCGCGGTGTCTCCGTCACCCTCGCCGTCGCCGACCCGCCTGACAAGGGCGCTGTGCTGGCCGGCGCGATCGCCCGCATCGCCGCCGTGTGCCCCTCCATCGGTGTCCGCCTCCTTCCCATCCCGTCCTGCGAGGGCAAGACGTACTCCCACCCCGTCATGTGGATCGTCGACGCGCTCCGCCTCGCCAACCCCGTGCTCCGGGAGCTCCTGCGCTCGTTCCCTGCTGCCGTCGACGCTCTCGTGGTCGACATG TTCTGCATCGACGCGCTCGACGTCGCCGCCGAGCTCGCCGTCCCGGCCTACATGTTCTA CCCGTC TGCGGCCAGCGACC TAGCGATCTACC TCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_8400#0
ACGATTTTGCTATCCCGCAGTCCGCGCGCGCACCCGTTTCCTCCAACGACTGATCTGCTG
CGAGAAGCGTGGCCATGGCCATGGTGGAGAAGACGGTGCTGCTCTACCCTTGCCCTGCGG
TGGGCCATCTCAACCCCATGGTGCAGCTCGCCGAGGCCCTCGTCCGCCGCGGTGTCTCCG
TCACCCTCGCCGTCGCCGACCCGCCTGACAAGGGCGCTGTGCTGGCCGGCGCGATCGCCC
GCATCGCCGCCGTGTGCCCCTCCATCGGTGTCCGCCTCCTTCCCATCCCGTCCTGCGAGG
GCAAGACGTACTCCCACCCCGTCATGTGGATCGTCGACGCGCTCCGCCTCGCCAACCCCG
TGCTCCGGGAGCTCCTGCGCTCGTTCCCTGCTGCCGTCGACGCTCTCGTGGTCGACATGT
TCTGCATCGACGCGCTCGACGTCGCCGCCGAGCTCGCCGTCCCGGCCTACATGTTCTACC
CGTCTGCGGCCAGCGACCTAGCGATCTACCTCCAGGTTCCGCATGTCGCCCGCTCGGCTC
CATCCTCTTTCAAGGACATGGCCGACACGGTGCTGAGCTTCTCCGGCGTGCCGACGATTC
GCGCGCTGGACATGCCGGACACCATGCAAGACAGGGAGAGCGACGTGGGCACGACCCGGA
TTCACCACTGCTCCCGGATGGCTGAAGCGAGAGGCATTCTGGTGAACAGCTTCGATTGGT
TGGAGACGAGGGCCCTGAAAGCGATCCGCGGCGGCCTCTGCCTGCCGTCCGGCCGCTCGG
TGCCCGCGATCTACTGCGTTGGGCCGCTGGTCGATGGGGGCAAGCTCAAGGAGAACGACG
CGCGGCACGAGTGCCTCGAGTGGCTGGACCGCCAACCGAAGCAGAGCGTGGTGTTCCTCT
GCTTCGGGAGCAGGGGCACTTTCTCGGTGTCGCAGCTGAGCGAGATGGCTCGGGGGATAG
AGAACTCCGGACACAGATTCCTGTGGGCTGTGCGTAGCAACCTCGGCGAGGTGGACTTGG
AGGCGTTGTTTCCGGAAGGGTTCTTGGAGAGGACCCAAGGCAGGGGATTCGTCGTGAAGA
ACTGGGCGCCGCAGTCGGCGGTGCTGCAGCACGGCGCCGTCGGCGCGTTCGTGACGCACT
GCGGGTGGAACTCGTCGCTGGAGGCGATCATGTCCGGCGTGCCGATGATCTGCTGGCCGC
TGTACGCGGAGCAGAGGCTGAACAAAGCGCACCTGGTGGAGGAGATGAAGCTTGGGGTGT
TGGTGGAGGGCTACGACGGCGAGCTTGTTAAGGCCGACGAGCTGGAGACCAAGGTTCGGC
TGGTGATGGAGTCGGAGGAAGGGAAGAGGCTTAGGGAGAGGTCGGCGATGGCCAAGGAGA
TGGCTGCTGATGCCGTCAAAGATGGGGGTTCGTCTGACATGGCGTTCGCCGAATTCCTGA
ACAATTTGGGGACGAACAACGTGAAAAGCGGCCCGAGAGATACACCCGTGCATGACTGAA
ACACTGTAGCCGAGTTGGTTTTAGCAGGACCGAGAATAATGTTCTTCAGTATATTTAGAT
TTCGTCAGATTTTAGAGTTGTTCATGTCGTGATGTGGCCGAATCTGTATGAGACTACGGT
GCAACTATGCTAGCGCATCTCATGCAAAGTCCGGGCATCCTTACAGAGAACACACTAATT
TATTTCCCAGTTTTTTCTCCCTCATGCAACTATACTTTAGGTTGATACTTGAGAATTTGA
ACTTTGAAGCA
clustalw multiple alignements is not computed in this case