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Oryza sativa
cluster # 8403 cluster # 8403       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8403#0 length = 1692 sequences # 1  
consensus_8403#1 length = 1484 sequences # 3  
consensus_8403#2 length = 441 sequences # 1  

consensusID : consensus_8403#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1692
fasta sequence
                              [TAGAATCACCTCTCTTCTACTACTTCTCCTCCTCACTGTACCACCGTAGGGTTAGGAGGAGAAAAAAATCCCCATCGATCCATCCATGGCTGCAGCAGCAGCGACCAAGGGGCTGCTCCACCTTGTAGATCCGGTGGCCGTCTACTTCCTCTTCCACTAAAATCTGGTGCCATCAGTTGGAGCTCAGCTCTATGCGTGAGAGCTACTAGAAAAAAGAGAGCACTTTTTCAGATCTGAAAGGGAATCAACTTTTCAACTCTCCCCTTCCCTGTGCATGTGAGATTGCAAGTCTCCACTAGTTTTTCCACGATCTTCTGCAGCAAGCTCATACCATGGATATAGGAGAAAGCAAAGGCAAAGGCAGGGGCAAGGGCAAATCAAGCAACCTAGCAGCGGGTAGGGCCAAACCTATAAATTGGCCGCTAGCACTCTCCGAGTTCCTCCTTGATTGGTACATTGAAAAGAAGTTGCAGCTACCGCCAAAAGCAGTGATCAAGAAGATACACCACACTGCTTGCACATTAGCTATAAATAGCAAGTATGGCACTACTTACACGGTTGATCAAGTTCAACACCACTACAGGCGTCATAAAGAAAATTGGTCTCTTGTAGCTCGTCATCTAAATGAAAGTGGTAATGGCTGGGATGAGACTACAAAAATGTTAACTCTCTCTCAAGCTACTTTGGATGCACTTTTGATAAATGATCGTGGAATTCTTTCGAAGCCAATCCAATTCTTTGACAAGCTGCAAGAATTATTTAGTGGTTGCTCGGCTGATGGTGCATTCATGGAAGATCCTTCAAGTGCTGCTGATTTTGATGACGAAGATGATGAAGATGATAAATTTGATTTTCTGAATGATATGTCAACCTATGCTGATACAAAAGTTCCACAAGGTGAGGACTTTGATAAATTGGAGTCAGACAGTGATGATTGCAAGGAGGTGGCAGCCCTTAGTGCAGCTACTATCCAAGTTTCATCGTCTACTAATTATGATTTGAAGCCAAACAAGAAGAATTTCAAAAGGTGTGGGAAGCCAAAGACGTTGCCCCAATCACATAATGATAAGTGTAACAAGACAAAGGCAAAATCCACAGCTCAAGTGCATGATAGTGATGATGTTGATGTGCTGATCAACAATACCTTGGTTGGAATCAAAAACACTCTTGAGAAACCAATACAGACAGTTGCCCCTCAAGATCCAAATATTCCTCTATGGGACATGCTTAAGAAGATTGCCTTAGACCCTGATGACAAGTTGAGAGTAGGGCTGCACCTTTGTAAGCCAGAGCTTCAAGCTAACCGCAGTTTTCTTATTAGCATGGGTCAAGAATACCTTGAGCATTGGATCTACAAGTTTCTATCTGGTGATGATCCAAATCTCGGCTGACTTATTGGTGCATATTATAAGTTAGCCAAAGCTTGTCATGGTCGATGAGGGTCTCTTTTTGTTGCACCCTTTTGGTTATGCAATTGCTGCACTATTTGTGTTTAAACAGTTGCTAAATAGTACTAACATAGGTGCTATGGTGGTGCATATTATGACAAGTTATTAAATATGCAGACAATGCTAATCTTTTGGATAATTCGATAACCTGGTAGCTTTGTAGTATCCTTGGTTTACTGCTATATTGTTTAAGCTGTACTATTATTGGCTGGACCTATAGCCTTGGTTTAATGTTATGTTATTT]

[+] EMBL AK064593             [TAGAATCACCTCTCTTCTACTACTTCTCCTCCTCACTGTACCACCGTAGGGTTAGGAGGAGAAAAAAATCCCCATCGATCCATCCATGGCTGCAGCAGCAGCGACCAAGGGGCTGCTCCACCTTGTAGATCCGGTGGCCGTCTACTTCCTCTTCCACTAAAATCTGGTGCCATCAGTTGGAGCTCAGCTCTATGCGTGAGAGCTACTAGAAAAAAGAGAGCACTTTTTCAGATCTGAAAGGGAATCAACTTTTCAACTCTCCCCTTCCCTGTGCATGTGAGATTGCAAGTCTCCACTAGTTTTTCCACGATCTTCTGCAGCAAGCTCATACCATGGATATAGGAGAAAGCAAAGGCAAAGGCAGGGGCAAGGGCAAATCAAGCAACCTAGCAGCGGGTAGGGCCAAACCTATAAATTGGCCGCTAGCACTCTCCGAGTTCCTCCTTGATTGGTACATTGAAAAGAAGTTGCAGCTACCGCCAAAAGCAGTGATCAAGAAGATACACCACACTGCTTGCACATTAGCTATAAATAGCAAGTATGGCACTACTTACACGGTTGATCAAGTTCAACACCACTACAGGCGTCATAAAGAAAATTGGTCTCTTGTAGCTCGTCATCTAAATGAAAGTGGTAATGGCTGGGATGAGACTACAAAAATGTTAACTCTCTCTCAAGCTACTTTGGATGCACTTTTGATAAATGATCGTGGAATTCTTTCGAAGCCAATCCAATTCTTTGACAAGCTGCAAGAATTATTTAGTGGTTGCTCGGCTGATGGTGCATTCATGGAAGATCCTTCAAGTGCTGCTGATTTTGATGACGAAGATGATGAAGATGATAAATTTGATTTTCTGAATGATATGTCAACCTATGCTGATACAAAAGTTCCACAAGGTGAGGACTTTGATAAATTGGAGTCAGACAGTGATGATTGCAAGGAGGTGGCAGCCCTTAGTGCAGCTACTATCCAAGTTTCATCGTCTACTAATTATGATTTGAAGCCAAACAAGAAGAATTTCAAAAGGTGTGGGAAGCCAAAGACGTTGCCCCAATCACATAATGATAAGTGTAACAAGACAAAGGCAAAATCCACAGCTCAAGTGCATGATAGTGATGATGTTGATGTGCTGATCAACAATACCTTGGTTGGAATCAAAAACACTCTTGAGAAACCAATACAGACAGTTGCCCCTCAAGATCCAAATATTCCTCTATGGGACATGCTTAAGAAGATTGCCTTAGACCCTGATGACAAGTTGAGAGTAGGGCTGCACCTTTGTAAGCCAGAGCTTCAAGCTAACCGCAGTTTTCTTATTAGCATGGGTCAAGAATACCTTGAGCATTGGATCTACAAGTTTCTATCTGGTGATGATCCAAATCTCGGCTGACTTATTGGTGCATATTATAAGTTAGCCAAAGCTTGTCATGGTCGATGAGGGTCTCTTTTTGTTGCACCCTTTTGGTTATGCAATTGCTGCACTATTTGTGTTTAAACAGTTGCTAAATAGTACTAACATAGGTGCTATGGTGGTGCATATTATGACAAGTTATTAAATATGCAGACAATGCTAATCTTTTGGATAATTCGATAACCTGGTAGCTTTGTAGTATCCTTGGTTTACTGCTATATTGTTTAAGCTGTACTATTATTGGCTGGACCTATAGCCTTGGTTTAATGTTATGTTATTT]


>consensus_8403#0 TAGAATCACCTCTCTTCTACTACTTCTCCTCCTCACTGTACCACCGTAGGGTTAGGAGGA GAAAAAAATCCCCATCGATCCATCCATGGCTGCAGCAGCAGCGACCAAGGGGCTGCTCCA CCTTGTAGATCCGGTGGCCGTCTACTTCCTCTTCCACTAAAATCTGGTGCCATCAGTTGG AGCTCAGCTCTATGCGTGAGAGCTACTAGAAAAAAGAGAGCACTTTTTCAGATCTGAAAG GGAATCAACTTTTCAACTCTCCCCTTCCCTGTGCATGTGAGATTGCAAGTCTCCACTAGT TTTTCCACGATCTTCTGCAGCAAGCTCATACCATGGATATAGGAGAAAGCAAAGGCAAAG GCAGGGGCAAGGGCAAATCAAGCAACCTAGCAGCGGGTAGGGCCAAACCTATAAATTGGC CGCTAGCACTCTCCGAGTTCCTCCTTGATTGGTACATTGAAAAGAAGTTGCAGCTACCGC CAAAAGCAGTGATCAAGAAGATACACCACACTGCTTGCACATTAGCTATAAATAGCAAGT ATGGCACTACTTACACGGTTGATCAAGTTCAACACCACTACAGGCGTCATAAAGAAAATT GGTCTCTTGTAGCTCGTCATCTAAATGAAAGTGGTAATGGCTGGGATGAGACTACAAAAA TGTTAACTCTCTCTCAAGCTACTTTGGATGCACTTTTGATAAATGATCGTGGAATTCTTT CGAAGCCAATCCAATTCTTTGACAAGCTGCAAGAATTATTTAGTGGTTGCTCGGCTGATG GTGCATTCATGGAAGATCCTTCAAGTGCTGCTGATTTTGATGACGAAGATGATGAAGATG ATAAATTTGATTTTCTGAATGATATGTCAACCTATGCTGATACAAAAGTTCCACAAGGTG AGGACTTTGATAAATTGGAGTCAGACAGTGATGATTGCAAGGAGGTGGCAGCCCTTAGTG CAGCTACTATCCAAGTTTCATCGTCTACTAATTATGATTTGAAGCCAAACAAGAAGAATT TCAAAAGGTGTGGGAAGCCAAAGACGTTGCCCCAATCACATAATGATAAGTGTAACAAGA CAAAGGCAAAATCCACAGCTCAAGTGCATGATAGTGATGATGTTGATGTGCTGATCAACA ATACCTTGGTTGGAATCAAAAACACTCTTGAGAAACCAATACAGACAGTTGCCCCTCAAG ATCCAAATATTCCTCTATGGGACATGCTTAAGAAGATTGCCTTAGACCCTGATGACAAGT TGAGAGTAGGGCTGCACCTTTGTAAGCCAGAGCTTCAAGCTAACCGCAGTTTTCTTATTA GCATGGGTCAAGAATACCTTGAGCATTGGATCTACAAGTTTCTATCTGGTGATGATCCAA ATCTCGGCTGACTTATTGGTGCATATTATAAGTTAGCCAAAGCTTGTCATGGTCGATGAG GGTCTCTTTTTGTTGCACCCTTTTGGTTATGCAATTGCTGCACTATTTGTGTTTAAACAG TTGCTAAATAGTACTAACATAGGTGCTATGGTGGTGCATATTATGACAAGTTATTAAATA TGCAGACAATGCTAATCTTTTGGATAATTCGATAACCTGGTAGCTTTGTAGTATCCTTGG TTTACTGCTATATTGTTTAAGCTGTACTATTATTGGCTGGACCTATAGCCTTGGTTTAAT GTTATGTTATTT



consensusID : consensus_8403#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1484
fasta sequence
                              [CTTTCCCCACCTTGTTCTACTAGCCTAGCCTTCACAAAAGCAAATCCACGCAAAATCTGCTCCATGGCTGCGGGATGATGGCCGGGAAACCACTCCAGCTTGCAGATCCAGTGAGTGAAGGCTGAAGGCTAGTGAAGGCTCAAGTTCTTTTACAAATCCTCAACGAATCAACATGTTCTCTCTCCTTCTCTCTGCATGTGCATACTGAAATGTTTCCATCGAAAGGCTTGTTGTCAGATCTGAAATTGCAAGTTCACACCATAGATGTAGGAGAGAGCAACAGTAATGGCAAGGGCAAAGGCAAAGGCAAGGCAGGCAAAGGGGTTGTGAGGGCAAAACCTA-TAAATTGGCCCCCAGCACTCTGTAAATTTCTTATT-GATTGGTACATTGAAAAAAAGTTGAAGTTGCCACCAAAAGGAGTAATTAAGAAGATACATCGCACTGCTTGCACATCAGCTATAGATGCAAAGTATGGCAGTACTTACACCGCTGATCAAGTTCAGCGCCACTATAGGTGTCACAAAGAGAATTGGGGGCTGGTAGCTCGCCATCTGAATGACAGTGGTAATGGCTGGGATGAAACAAACAGAATGCTGACTCTATCGTAATCTACTTTGGATTTACTATTGATAAATGGCCGTGGAATTCTTTCAAAGCCAATTCAGTTCTTCGACAAATTGCAAGAATTGTTTAGTGGTTCCTCAGCCAATGGAACATATATGCAAGATCCTTCTAGTGCTACTGATTTTGATGATGAGACTGAAGACTTTGATTTTCTTAATGATATGTCAACCTATGCTGAAACCAAAGTTCCACAGGGGGAAGACTCAGACAAGTTAGAGTCAGATAGTGATGATTGCAAGGAGGTGGCAACCCTTAGTGCAGCTGCATCAGTTAGCCAAGTTTCATCTTGTAATATGAGTGGTTAGAAGGCAAACAGAAGGAGTTTCAAAAGGTGTGGAAAGCCAAAGACCTTGCCCCAATCACATAACAACAAGGGTAACAAGCTTAAGACCAAACACAAATACATTGCATGGTGATGATGATGTTGATGGACTGATCACCAATACCTTGGTTGGAATAAAAAATAACCTTGACAAACCAATACAAACTGCAGCCCCCCCAGATCCAAATGCTCCTCTATGGAACATGCTCAAAATGTCCTAGAACCTGATGATAAGATGAGACTGGGACTACACCTTTGCAAGCCAGAATTCCAAGCTCATCGTGGTTTTCTTATAAGCATGGGTCAAGAAAACCTTGAGCGTTGGGTCTACAAGTTCTGATCCGGTGATGATCCAGGTTTCTAGTGAGTTACAAGTGCATATTGGTTGCAAAAGCTATTCGTGGTTGATTAGGGTCTGATTTTTGTTGCACCCTTTTGGTTATGCAATTGCTGTACTATGTGTGTTTAAACAATTGCTAAATATTAATTTGGGTACTATAGTGTTTCATGCTATGACATGCTAAAAAAAAAAAAAAAA]

[+] EMBL AK102163             [CTTTCCCCACCTTGTTCTACTAGCCTAGCCTTCACAAAAGCAAATCCACGCAAAATCTGCTCCATGGCTGCGGGATGATGGCCGGGAAACCACTCCAGCTTGCAGATCCAGTGAGTGAAGGCTGAAGGCTAGTGAAGGCTCAAGTTCTTTTACAAATCCTCAACGAATCAACATGTTCTCTCTCCTTCTCTCTGCATGTGCATACTGAAATGTTTCCATCGAAAGGCTTGTTGTCAGATCTGAAATTGCAAGTTCACACCATAGATGTAGGAGAGAGCAACAGTAATGGCAAGGGCAAAGGCAAAGGCAAGGCAGGCAAAGGGGTTGTGAGGGCAAAACCTA TAAATTGGCCCCCAGCACTCTGTAAATTTCTTATT GATTGGTACATTGAAAAAAAGTTGAAGTTGCCACCAAAAGGAGTAATTAAGAAGATACATCGCACTGCTTGCACATCAGCTATAGATGCAAAGTATGGCAGTACTTACACCGCTGATCAAGTTCAGCGCCACTATAGGTGTCACAAAGAGAATTGGGGGCTGGTAGCTCGCCATCTGAATGACAGTGGTAATGGCTGGGATGAAACAAACAGAATGCTGACTCTATCGTAATCTACTTTGGATTTACTATTGATAAATGGCCGTGGAATTCTTTCAAAGCCAATTCAGTTCTTCGACAAATTGCAAGAATTGTTTAGTGGTTCCTCAGCCAATGGAACATATATGCAAGATCCTTCTAGTGCTACTGATTTTGATGATGAGACTGAAGACTTTGATTTTCTTAATGATATGTCAACCTATGCTGAAACCAAAGTTCCACAGGGGGAAGACTCAGACAAGTTAGAGTCAGATAGTGATGATTGCAAGGAGGTGGCAACCCTTAGTGCAGCTGCATCAGTTAGCCAAGTTTCATCTTGTAATATGAGTGGTTAGAAGGCAAACAGAAGGAGTTTCAAAAGGTGTGGAAAGCCAAAGACCTTGCCCCAATCACATAACAACAAGGGTAACAAGCTTAAGACCAAACACAAATACATTGCATGGTGATGATGATGTTGATGGACTGATCACCAATACCTTGGTTGGAATAAAAAATAACCTTGACAAACCAATACAAACTGCAGCCCCCCCAGATCCAAATGCTCCTCTATGGAACATGCTCAAAATGTCCTAGAACCTGATGATAAGATGAGACTGGGACTACACCTTTGCAAGCCAGAATTCCAAGCTCATCGTGGTTTTCTTATAAGCATGGGTCAAGAAAACCTTGAGCGTTGGGTCTACAAGTTCTGATCCGGTGATGATCCAGGTTTCTAGTGAGTTACAAGTGCATATTGGTTGCAAAAGCTATTCGTGGTTGATTAGGGTCTGATTTTTGTTGCACCCTTTTGGTTATGCAATTGCTGTACTATGTGTGTTTAAACAATTGCTAAATATTAATTTGGGTACTATAGT                                    ]
[+] EMBL OSC111941            [       CACCTTGTTCTACTAGCCTAGCCTTCACAAAAGCAAATCCACGCAAAATCTGCTCCATGGCTGCGGGATGATGGCCGGGAAACCACTCCAGCTTGCAGATCCAGTGAGTNAAGGCTGAAGGCTAGTGAAGGCTCAAGTTCTTTTACAAATCCTCAACGAATCAACATGTTCTCTCTCCTTCTCTCTGCATGTGCATACTGAAATGTTTCCATCGAAAGGCTTGTTGTCAGATCTGAAATTGCAAGTTCACACCATAGATGTAGGAGAGAGCAACAGTAATGGCAAGGGCAAAGGCAAAGGCAAGGCAGGCAAAGGGGTTGTGAGGGCAAAACCTATTAAATTGGGCCCCAGCACTCTGTAAATTTCTTATTGGATTNGNACATTGGAAAAAAGTTGAAGTTGCCACCCAAg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU166343             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCACCAATACCTTGGTTGGAATAAAAAATAACCTTGACAAACCAATACAAACTGCAGCCCCCCCAGATCCAAATGCTCCTCTATGGAACATGCTCAAAATGTCCTAGAACCTGATGATAAGATGAGACTGGGACTACACCTTTGCAAGCCAGAATTCCAAGCTCATCGTGGTTTTCTTATAAGCATGGGTCAAGAAAACCTTGAGCGTTGGGTCTACAAGTTCTGATCCGGTGATGATCCAGGTTTCTAGTGAGTTACAAGTGCATATTGGTTGCAAAAGCTATTCGTGGTTGATTAGGGTCTGATTTTTGTTGCACCCTTTTGGTTATGCAATTGCTGCACTATGTGTGTTTAAACAATTGCTAAATATTAATTTGGGTACTATAGTGTTTCATGCTATGACATGCTAAAAAAAAAAAAAAAA]


>consensus_8403#1 CTTTCCCCACCTTGTTCTACTAGCCTAGCCTTCACAAAAGCAAATCCACGCAAAATCTGC TCCATGGCTGCGGGATGATGGCCGGGAAACCACTCCAGCTTGCAGATCCAGTGAGTGAAG GCTGAAGGCTAGTGAAGGCTCAAGTTCTTTTACAAATCCTCAACGAATCAACATGTTCTC TCTCCTTCTCTCTGCATGTGCATACTGAAATGTTTCCATCGAAAGGCTTGTTGTCAGATC TGAAATTGCAAGTTCACACCATAGATGTAGGAGAGAGCAACAGTAATGGCAAGGGCAAAG GCAAAGGCAAGGCAGGCAAAGGGGTTGTGAGGGCAAAACCTATAAATTGGCCCCCAGCAC TCTGTAAATTTCTTATTGATTGGTACATTGAAAAAAAGTTGAAGTTGCCACCAAAAGGAG TAATTAAGAAGATACATCGCACTGCTTGCACATCAGCTATAGATGCAAAGTATGGCAGTA CTTACACCGCTGATCAAGTTCAGCGCCACTATAGGTGTCACAAAGAGAATTGGGGGCTGG TAGCTCGCCATCTGAATGACAGTGGTAATGGCTGGGATGAAACAAACAGAATGCTGACTC TATCGTAATCTACTTTGGATTTACTATTGATAAATGGCCGTGGAATTCTTTCAAAGCCAA TTCAGTTCTTCGACAAATTGCAAGAATTGTTTAGTGGTTCCTCAGCCAATGGAACATATA TGCAAGATCCTTCTAGTGCTACTGATTTTGATGATGAGACTGAAGACTTTGATTTTCTTA ATGATATGTCAACCTATGCTGAAACCAAAGTTCCACAGGGGGAAGACTCAGACAAGTTAG AGTCAGATAGTGATGATTGCAAGGAGGTGGCAACCCTTAGTGCAGCTGCATCAGTTAGCC AAGTTTCATCTTGTAATATGAGTGGTTAGAAGGCAAACAGAAGGAGTTTCAAAAGGTGTG GAAAGCCAAAGACCTTGCCCCAATCACATAACAACAAGGGTAACAAGCTTAAGACCAAAC ACAAATACATTGCATGGTGATGATGATGTTGATGGACTGATCACCAATACCTTGGTTGGA ATAAAAAATAACCTTGACAAACCAATACAAACTGCAGCCCCCCCAGATCCAAATGCTCCT CTATGGAACATGCTCAAAATGTCCTAGAACCTGATGATAAGATGAGACTGGGACTACACC TTTGCAAGCCAGAATTCCAAGCTCATCGTGGTTTTCTTATAAGCATGGGTCAAGAAAACC TTGAGCGTTGGGTCTACAAGTTCTGATCCGGTGATGATCCAGGTTTCTAGTGAGTTACAA GTGCATATTGGTTGCAAAAGCTATTCGTGGTTGATTAGGGTCTGATTTTTGTTGCACCCT TTTGGTTATGCAATTGCTGTACTATGTGTGTTTAAACAATTGCTAAATATTAATTTGGGT ACTATAGTGTTTCATGCTATGACATGCTAAAAAAAAAAAAAAAA



consensusID : consensus_8403#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 441
fasta sequence
                              [CCTTGTTCTACTAGCCTAGCCTTCACAAAAGCAAATCCACGCAAAATCTGCTCCATGGCTGCGGGATGATGGCCGGGAAACCACTCCAGCTTGCAGATCCAGTGAGTGAAGGCTGAAGGCTAGTGAAGGCTCAAGTTCTTTTACAAATCCTCAACGAATCAACATGTTCTCTCTCCTTCTCTCTGCATGTGCATACTGAAATGTTTCCATCGAAAGGCTTGTTGTCAGATCTGAAATTGCAAGGTGAGGAACACAGTCTCAAGCTTTTTTTTGTTGCGTTCCCCTCTCTTGATTTTTTTAGGAACATTTTCCCTCTCTTGTTAGCCTGTTATTTCTTTTTTTCANCCAAATCTGGGAAAAAGCGGTGGATTGTTAGGAATAAATCAATGTGAGCCCTGTACCTGGNAATATTACCTTTAATATATGNATATGAATGGNGTA]

[+] EMBL C73361               [CCTTGTTCTACTAGCCTAGCCTTCACAAAAGCAAATCCACGCAAAATCTGCTCCATGGCTGCGGGATGATGGCCGGGAAACCACTCCAGCTTGCAGATCCAGTGAGTGAAGGCTGAAGGCTAGTGAAGGCTCAAGTTCTTTTACAAATCCTCAACGAATCAACATGTTCTCTCTCCTTCTCTCTGCATGTGCATACTGAAATGTTTCCATCGAAAGGCTTGTTGTCAGATCTGAAATTGCAAGGTGAGGAACACAGTCTCAAGCTTTTTTTTGTTGCGTTCCCCTCTCTTGATTTTTTTAGGAACATTTTCCCTCTCTTGTTAGCCTGTTATTTCTTTTTTTCANCCAAATCTGGGAAAAAGCGGTGGATTGTTAGGAATAAATCAATGTGAGCCCTGTACCTGGNAATATTACCTTTAATATATGNATATGAATGGNGTA]


>consensus_8403#2 CCTTGTTCTACTAGCCTAGCCTTCACAAAAGCAAATCCACGCAAAATCTGCTCCATGGCT GCGGGATGATGGCCGGGAAACCACTCCAGCTTGCAGATCCAGTGAGTGAAGGCTGAAGGC TAGTGAAGGCTCAAGTTCTTTTACAAATCCTCAACGAATCAACATGTTCTCTCTCCTTCT CTCTGCATGTGCATACTGAAATGTTTCCATCGAAAGGCTTGTTGTCAGATCTGAAATTGC AAGGTGAGGAACACAGTCTCAAGCTTTTTTTTGTTGCGTTCCCCTCTCTTGATTTTTTTA GGAACATTTTCCCTCTCTTGTTAGCCTGTTATTTCTTTTTTTCANCCAAATCTGGGAAAA AGCGGTGGATTGTTAGGAATAAATCAATGTGAGCCCTGTACCTGGNAATATTACCTTTAA TATATGNATATGAATGGNGTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8403#0      TAGAATCACCTCTCTTCTACTACTTCTCCTCCTCACTGTACCACCGTAGGGTTAGGAGGA 60
consensus_8403#1      ---------------------CTTTCCCCACCTTGTTCTACTAGCCTAGCCTTCACAAAA 39
consensus_8403#2      ------------------------------CCTTGTTCTACTAGCCTAGCCTTCACAAAA 30
                                                    ***   * *** * * ***  **   *  *

consensus_8403#0      GAAAAAAATCCCCATCGATCCA-TCCATGGCTGCAGCAGCAGCGACCAAGGGGCTGCTCC 119
consensus_8403#1      GCAAATCCACGCAA--AATCTGCTCCATGGCTGCGG-GATGATGGCCGGGAAACCACTCC 96
consensus_8403#2      GCAAATCCACGCAA--AATCTGCTCCATGGCTGCGG-GATGATGGCCGGGAAACCACTCC 87
                      * ***    * * *   ***   *********** *       * **  *   *  ****

consensus_8403#0      ACCTTGTAGATCCGGTGGCCGTCTACTTCCTCTTCCACTAAAATCTGGTGCCATCAGTTG 179
consensus_8403#1      AGCTTGCAGATCCAGTG-------------------AGTGAAGGCTGAAGGC--TAGTGA 135
consensus_8403#2      AGCTTGCAGATCCAGTG-------------------AGTGAAGGCTGAAGGC--TAGTGA 126
                      * **** ****** ***                   * * **  ***  * *   ***  

consensus_8403#0      GAGCTCAGCTCTATGCGTGAGAGCTACTAGAAAAAAGAGAGCACTTTTTCAGATCTGAAA 239
consensus_8403#1      AGGCTCA--------------------------------AGTTCTTTTACAAATCCTCAA 163
consensus_8403#2      AGGCTCA--------------------------------AGTTCTTTTACAAATCCTCAA 154
                        *****                                **  ***** ** ***   **

consensus_8403#0      GGGAATCAACTTTTCAACTCTCCCCTTCCCTGTGCATGTG-AGATTGCAA-GTCTCCACT 297
consensus_8403#1      CG-AATCAACATGTT--CTCTCTCCTTCTCTCTGCATGTGCATACTGAAATGTTTCCATC 220
consensus_8403#2      CG-AATCAACATGTT--CTCTCTCCTTCTCTCTGCATGTGCATACTGAAATGTTTCCATC 211
                       * ******* * *   ***** ***** ** ******** * * ** ** ** ****  

consensus_8403#0      AG-----TTTTTCCACGATCTTCTGCAGCAAGCTCATACCATGGATATAGGAGAAAGCAA 352
consensus_8403#1      GAAAGGCTTGTTGTCAGATCTGAAATTGCAAGTTCACACCATAGATGTAGGAGAGAGCAA 280
consensus_8403#2      GA------------AAGGCTTGTTGT---------------CAGATCTGA--------AA 236
                                      *   *                      *** *          **

consensus_8403#0      AGGCAAAGGCAGGGGCAAGGGCAAA--TCAAGCAACCTAGCAGCGGGT-AGGGCCAAACC 409
consensus_8403#1      CAGTAATGGCAAGGGCAAAGGCAAAGGCAAGGCAGGCAAAGGGGTTGTGAGGGCAAAACC 340
consensus_8403#2      TTGCAAGGTGAGGAACACAGTC-----TCAAGCTTTTTTTTGTTGCGT----TCCCCTCT 287
                        * ** *  * *  **  * *       * **             **     *    * 

consensus_8403#0      TATAAATTGGCCGCTAGCACTCTCCGAGTTCCTCCTTGATTGGTACATTGAAAAGAAGTT 469
consensus_8403#1      TATAAATTGGCCCCCAGCACTCTGTAAATTTCTTATTGATTGGTACATTGAAAAAAAGTT 400
consensus_8403#2      CTTGATTTTTTTAGGAACATTTTCCC--TCTCTTGTTAGCCTGTTATTTCTTTTTTTCAN 345
                        * * **       * ** * *     *  **  **     **   **           

consensus_8403#0      GCAGCTACCGCCAAAAGCAGTGATCAAGAAGATACACCACACTGCTTGCACATTAGCTAT 529
consensus_8403#1      GAAGTTGCCACCAAAAGGAGTAATTAAGAAGATACATCGCACTGCTTGCACATCAGCTAT 460
consensus_8403#2      CCAAATCTGGGAAAAAGCGGTGGATTGTTAGGAATAAATCAATGTGAGCCCTGTACCTGG 405
                        *  *      *****  **        **  * *   ** **   ** *   * **  

consensus_8403#0      AAATAGCAAGTATGGCACTACTTACACGGTTGATCAAGTTCAACACCACTACAGGCGTCA 589
consensus_8403#1      AGATGCAAAGTATGGCAGTACTTACACCGCTGATCAAGTTCAGCGCCACTATAGGTGTCA 520
consensus_8403#2      NAATATTACCTTTAATA-TATGNATATGAATGGNGTA----------------------- 441
                        **   *  * *   * **   * *    **    *                       

consensus_8403#0      TAAAGAAAATTGGTCTCTTGTAGCTCGTCATCTAAATGAAAGTGGTAATGGCTGGGATGA 649
consensus_8403#1      CAAAGAGAATTGGGGGCTGGTAGCTCGCCATCTGAATGACAGTGGTAATGGCTGGGATGA 580
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      GACTACAAAAATGTTAACTCTCTCTCAAGCTACTTTGGATGCACTTTTGATAAATGATCG 709
consensus_8403#1      AACAAACAGAATGCTGACTCTATCGTAATCTACTTTGGATTTACTATTGATAAATGGCCG 640
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      TGGAATTCTTTCGAAGCCAATCCAATTCTTTGACAAGCTGCAAGAATTATTTAGTGGTTG 769
consensus_8403#1      TGGAATTCTTTCAAAGCCAATTCAGTTCTTCGACAAATTGCAAGAATTGTTTAGTGGTTC 700
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      CTCGGCTGATGGTGCATTCATGGAAGATCCTTCAAGTGCTGCTGATTTTGATGACGAAGA 829
consensus_8403#1      CTCAGCCAATGGAACATATATGCAAGATCCTTCTAGTGCTACTGATTTTGATGA------ 754
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      TGATGAAGATGATAAATTTGATTTTCTGAATGATATGTCAACCTATGCTGATACAAAAGT 889
consensus_8403#1      ---TGAGACTGAAGACTTTGATTTTCTTAATGATATGTCAACCTATGCTGAAACCAAAGT 811
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      TCCACAAGGTGAGGACTTTGATAAATTGGAGTCAGACAGTGATGATTGCAAGGAGGTGGC 949
consensus_8403#1      TCCACAGGGGGAAGACTCAGACAAGTTAGAGTCAGATAGTGATGATTGCAAGGAGGTGGC 871
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      AGCCCTTAGTGCAGCTAC------TATCCAAGTTTCATCGTCTACTAATTATGATTTGAA 1003
consensus_8403#1      AACCCTTAGTGCAGCTGCATCAGTTAGCCAAGTTTCATCTTGTAATATGAGTGGTTAGAA 931
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      GCCAAACAAGAAGAATTTCAAAAGGTGTGGGAAGCCAAAGACGTTGCCCCAATCACATAA 1063
consensus_8403#1      GGCAAACAGAAGGAGTTTCAAAAGGTGTGGAAAGCCAAAGACCTTGCCCCAATCACATAA 991
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      TGATAAGTGTAACAAGACAAAGGCAAAATCCACAGCTCAAGTGCATGATAGTGATGATGT 1123
consensus_8403#1      CAACAAGGGTAACAAGCTTAAGACCAAA--CACAAATACATTGCATGGTGATGATGATGT 1049
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      TGATGTGCTGATCAACAATACCTTGGTTGGAATCAAAAACACTCTTGAGAAACCAATACA 1183
consensus_8403#1      TGATGGACTGATCACCAATACCTTGGTTGGAATAAAAAATAACCTTGACAAACCAATACA 1109
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      GACAGTTGCCCCTCAAGATCCAAATATTCCTCTATGGGACATGCTTAAGAAGATTGCCTT 1243
consensus_8403#1      AACTGCAGCCCCCCCAGATCCAAATGCTCCTCTATGGAACATGCTCAAAA----TGTCCT 1165
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      AGACCCTGATGACAAGTTGAGAGTAGGGCTGCACCTTTGTAAGCCAGAGCTTCAAGCTAA 1303
consensus_8403#1      AGAACCTGATGATAAGATGAGACTGGGACTACACCTTTGCAAGCCAGAATTCCAAGCTCA 1225
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      CCGCAGTTTTCTTATTAGCATGGGTCAAGAATACCTTGAGCATTGGATCTACAAGTTTCT 1363
consensus_8403#1      TCGTGGTTTTCTTATAAGCATGGGTCAAGAAAACCTTGAGCGTTGGGTCTACAAGTTCTG 1285
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      ATCTGGTGATGATCCAAATCTCGGCTGACTTATTGGTGCATATTATAAGTTAGCCAAAGC 1423
consensus_8403#1      ATCCGGTGATGATCCAGGTTTCTAGTGAGTTACAAGTGCATATT----GGTTGCAAAAGC 1341
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      TTGTCATGGTCGATGAGGGTCTC-TTTTTGTTGCACCCTTTTGGTTATGCAATTGCTGCA 1482
consensus_8403#1      TATTCGTGGTTGATTAGGGTCTGATTTTTGTTGCACCCTTTTGGTTATGCAATTGCTGTA 1401
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      CTATTTGTGTTTAAACAGTTGCTAAATAGTACTAACATAGGTGCTATGGTGGTGCATATT 1542
consensus_8403#1      CTATGTGTGTTTAAACAATTGCTAAAT---ATTAATTTGGGTACTATAGTGTTTCATGCT 1458
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      ATGACAAGTTATTAAATATGCAGACAATGCTAATCTTTTGGATAATTCGATAACCTGGTA 1602
consensus_8403#1      ATGACATGCTAAAAAAAAAAAAAAAA---------------------------------- 1484
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      GCTTTGTAGTATCCTTGGTTTACTGCTATATTGTTTAAGCTGTACTATTATTGGCTGGAC 1662
consensus_8403#1      ------------------------------------------------------------
consensus_8403#2      ------------------------------------------------------------
                                                                                  

consensus_8403#0      CTATAGCCTTGGTTTAATGTTATGTTATTT 1692
consensus_8403#1      ------------------------------
consensus_8403#2      ------------------------------
                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)